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The map label for this gene is oxaA [H]

Identifier: 50365496

GI number: 50365496

Start: 791181

End: 792437

Strand: Reverse

Name: oxaA [H]

Synonym: Mfl681

Alternate gene names: 50365496

Gene position: 792437-791181 (Counterclockwise)

Preceding gene: 50365497

Following gene: 50365495

Centisome position: 99.9

GC content: 30.39

Gene sequence:

>1257_bases
GTGCTAATTTTGTATAATGAAAATCAATTATTTATGTCTAACCCAAAGAAAAATGGGGTTATGTCATACATGAACTCAAA
TAGCACCACAAAATCAAAAAAAACTTTTTGACAAAAAATGTCAGACAGTAATGATAGAAAAAGAATATTAAAGTTAATTT
GAAAATGATTTAAAATTTTAGGATTTTTATTCATCATAATCTCAATGATTTGAGGTTGTGTACAAATGTATCAAGATCCA
TATTTAATTCAAGAAGTAACAGATATGACTGGTAGAAGAGTATATATGCCAGGGGTTTCATTTGAAATAGTTATTTCCGC
ATTGGGTGAAAGACCTTCTCAAAACTGAGCAGTGATTGTAACTGGTTTAAATGGACAACAATATGCTTATAATGTTATTA
GTTCATGATCAGAAGCATTCTCAAAAACAGGTTCACCTTTCTATGGATTTTTCGTTTATCCAACAGCCTTATTACTTAAC
TCATTAATAAAAGGTATGTCCGGAACATTGAATCCAGAACTAGGTAATACAAGTTATGGTGTATCAGTTATATTTGCTAT
CTTGTTTACAGTTATTATTATTAAATCTATTTCGTTGGCATTTACTTGAAAATCTCAAGTAAATCAACACAAACAACAAG
CTTTCCAATTAAAACAAGCTGACATTCAAGCTAAATATAAAGGTGATAAATCACCTCAAGCAAGACAAAAAATGTCAGCA
GAGATGCAAGCTCTTCAAAAGAAAGAAGGCTTCTCACCATTTTCATCAATGGCAGGGGCTTTCGCATCAATGCCATTCCT
ATTCGCTATTTATGCAATTGTTAGATCAACAAAATCATTAAAAATTGCTAACGTAGGTATGATTGCATTAATTGAAAAAC
CATGATCTCAAATGTTAAATGGTGAAGTAATCTATCTATCACTACTTGCTGTTTATTTACCATTGCAAATCATCTCAATG
TTATTACCACTTGTTTTACAATCAATTAAACAAAAATCTATAACATTAACTGAAGCACAAAGAAAATCACGTAAAAAACA
ATTTATTATGCAAGGTGTATTTGCCTTTGTATTTATCTTTGTTGTTGCGTCAGTTGCCTCAGGGGTTGCAATTTACTGAA
TATTCTCATCAACTTTCCAAATAATTCAAACTTTAGGTTTCTTCTTCTGAAATCAACACAAAGCAAATCGTTCTGTGCAA
GAAGTTCAACGTAGAAAACGACAAGAAGAAAGAAGATTAAAAAAACTAAGTAAATAA

Upstream 100 bases:

>100_bases
ATTGTAATTATTGCAAGAAACAGAATGATGCAAAATTCATTTGATCAAAATCAAAAAGAATTAAACAAATTAGTTGTTAG
ATTTTTAAAATAGCAAGGAG

Downstream 100 bases:

>100_bases
TTTAAATAACAGGAAACTGTTATTTTTTTATTAAAAATTTATTTTAAATGAGACATTAAATGTATAATTTTTGTAGAAAT
AAATATGGAGATTTTTATAA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MLILYNENQLFMSNPKKNGVMSYMNSNSTTKSKKTFWQKMSDSNDRKRILKLIWKWFKILGFLFIIISMIWGCVQMYQDP
YLIQEVTDMTGRRVYMPGVSFEIVISALGERPSQNWAVIVTGLNGQQYAYNVISSWSEAFSKTGSPFYGFFVYPTALLLN
SLIKGMSGTLNPELGNTSYGVSVIFAILFTVIIIKSISLAFTWKSQVNQHKQQAFQLKQADIQAKYKGDKSPQARQKMSA
EMQALQKKEGFSPFSSMAGAFASMPFLFAIYAIVRSTKSLKIANVGMIALIEKPWSQMLNGEVIYLSLLAVYLPLQIISM
LLPLVLQSIKQKSITLTEAQRKSRKKQFIMQGVFAFVFIFVVASVASGVAIYWIFSSTFQIIQTLGFFFWNQHKANRSVQ
EVQRRKRQEERRLKKLSK

Sequences:

>Translated_418_residues
MLILYNENQLFMSNPKKNGVMSYMNSNSTTKSKKTF*QKMSDSNDRKRILKLI*K*FKILGFLFIIISMI*GCVQMYQDP
YLIQEVTDMTGRRVYMPGVSFEIVISALGERPSQN*AVIVTGLNGQQYAYNVISS*SEAFSKTGSPFYGFFVYPTALLLN
SLIKGMSGTLNPELGNTSYGVSVIFAILFTVIIIKSISLAFT*KSQVNQHKQQAFQLKQADIQAKYKGDKSPQARQKMSA
EMQALQKKEGFSPFSSMAGAFASMPFLFAIYAIVRSTKSLKIANVGMIALIEKP*SQMLNGEVIYLSLLAVYLPLQIISM
LLPLVLQSIKQKSITLTEAQRKSRKKQFIMQGVFAFVFIFVVASVASGVAIY*IFSSTFQIIQTLGFFF*NQHKANRSVQ
EVQRRKRQEERRLKKLSK
>Mature_418_residues
MLILYNENQLFMSNPKKNGVMSYMNSNSTTKSKKTF*QKMSDSNDRKRILKLI*K*FKILGFLFIIISMI*GCVQMYQDP
YLIQEVTDMTGRRVYMPGVSFEIVISALGERPSQN*AVIVTGLNGQQYAYNVISS*SEAFSKTGSPFYGFFVYPTALLLN
SLIKGMSGTLNPELGNTSYGVSVIFAILFTVIIIKSISLAFT*KSQVNQHKQQAFQLKQADIQAKYKGDKSPQARQKMSA
EMQALQKKEGFSPFSSMAGAFASMPFLFAIYAIVRSTKSLKIANVGMIALIEKP*SQMLNGEVIYLSLLAVYLPLQIISM
LLPLVLQSIKQKSITLTEAQRKSRKKQFIMQGVFAFVFIFVVASVASGVAIY*IFSSTFQIIQTLGFFF*NQHKANRSVQ
EVQRRKRQEERRLKKLSK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 45725; Mature: 45725

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILYNENQLFMSNPKKNGVMSYMNSNSTTKSKKTFQKMSDSNDRKRILKLIKFKILGFL
CEEEEECCEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FIIISMIGCVQMYQDPYLIQEVTDMTGRRVYMPGVSFEIVISALGERPSQNAVIVTGLNG
HHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEECCCC
QQYAYNVISSSEAFSKTGSPFYGFFVYPTALLLNSLIKGMSGTLNPELGNTSYGVSVIFA
CHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
ILFTVIIIKSISLAFTKSQVNQHKQQAFQLKQADIQAKYKGDKSPQARQKMSAEMQALQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KEGFSPFSSMAGAFASMPFLFAIYAIVRSTKSLKIANVGMIALIEKPSQMLNGEVIYLSL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHCCCHHHHHH
LAVYLPLQIISMLLPLVLQSIKQKSITLTEAQRKSRKKQFIMQGVFAFVFIFVVASVASG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VAIYIFSSTFQIIQTLGFFFNQHKANRSVQEVQRRKRQEERRLKKLSK
EEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLILYNENQLFMSNPKKNGVMSYMNSNSTTKSKKTFQKMSDSNDRKRILKLIKFKILGFL
CEEEEECCEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FIIISMIGCVQMYQDPYLIQEVTDMTGRRVYMPGVSFEIVISALGERPSQNAVIVTGLNG
HHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCCCEEEEECCCC
QQYAYNVISSSEAFSKTGSPFYGFFVYPTALLLNSLIKGMSGTLNPELGNTSYGVSVIFA
CHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
ILFTVIIIKSISLAFTKSQVNQHKQQAFQLKQADIQAKYKGDKSPQARQKMSAEMQALQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KEGFSPFSSMAGAFASMPFLFAIYAIVRSTKSLKIANVGMIALIEKPSQMLNGEVIYLSL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHCCCHHHHHH
LAVYLPLQIISMLLPLVLQSIKQKSITLTEAQRKSRKKQFIMQGVFAFVFIFVVASVASG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VAIYIFSSTFQIIQTLGFFFNQHKANRSVQEVQRRKRQEERRLKKLSK
EEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8233831 [H]