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The map label for this gene is rbgA [H]

Identifier: 50365355

GI number: 50365355

Start: 634350

End: 635297

Strand: Reverse

Name: rbgA [H]

Synonym: Mfl538

Alternate gene names: 50365355

Gene position: 635297-634350 (Counterclockwise)

Preceding gene: 50365356

Following gene: 50365354

Centisome position: 80.09

GC content: 25.95

Gene sequence:

>948_bases
ATGAGTGCAGAATTTAACTGATTTCCAGGTCATATGAATAAGACTTTAAAAAACATTGAAGAAAAAATACCTGTAGTTGA
TTTAGTAATCGAGATTTTAGATGCCCGTGCACCATATTCATCTCGTAATTTAACTTTTTCAAAAATTTTAAAGAATAAAC
CAATCTTATATGTTTTATCAAAAGCTGATATTGCAGACCCAAATATAACTAAAGAATGAGTTGAGTTTTATGAGAAAAAA
AATAATACTGTAATGGTTTTAGACGATAAACAAAAAAATATTGTTAAACCATTAATTGACTTAATTAATAAAGCAACAAA
AGAAAAACAAGAAAAAGATAAAGCAAAAGGAATGGTAAACTCATTAATTAATGTTTTAGTTATTGGAATCCCAAATGTAG
GTAAGTCAACATTCATTAATAGATTGATCAAAAACAAAAGTGTTAAAGCTGGTAATAAACCAGGATTAACAAGAGGTATT
CAATTAATACACTTATCACAATTTATTTCTTTATTAGATACACCCGGAGTGTTACCAGCAAAGTTAGAAAATGAAACTGT
AGCAACTAATATATGTGCAATTAATTCTATTAAAGAAGATGTATATCCTAAAGAAAGAGTTGCAGGAAAATTAATGCAAT
ACTTATTTAATCACTATGAAGGATTAATTGAAAATCATTATAAAATTTCTCCCAGATTACAAAGACCAATTCAAATAACA
GATACTTTTATAATTTTTGAAATGATTGCAAAAGTAAGAAAATGATACATGAATGATGATTTACTTGACTATGATAGAGT
AATTGATGCTTTTATGAGAGATATTATTGCTAATGAATTTAATAAAGTTTCTTTTGAAAGAATTTTAGAAGTTGTTCCAG
AGGAAATGGAAAAAGCATCAAAAATTAAAAATGAAAAAGCAATCGAGGATATTTCAGATTTATGATAG

Upstream 100 bases:

>100_bases
ATAAAAAATAGTTGTCAATTATTAAACAATATAACTCTCATAATAAATGAGGGTTTTTTTATTTGTTATAATATAAAAAG
ATTTAAAAGGAGAAAACGAT

Downstream 100 bases:

>100_bases
ATGAATCAAGAATATTATTTGATAGTCAAATTAGAGAAAAATATAAAACTGATTTTATTAGTGGCAGTGATGAAGCTGGT
AGAGGTGCAATGGCAGGACC

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSAEFNWFPGHMNKTLKNIEEKIPVVDLVIEILDARAPYSSRNLTFSKILKNKPILYVLSKADIADPNITKEWVEFYEKK
NNTVMVLDDKQKNIVKPLIDLINKATKEKQEKDKAKGMVNSLINVLVIGIPNVGKSTFINRLIKNKSVKAGNKPGLTRGI
QLIHLSQFISLLDTPGVLPAKLENETVATNICAINSIKEDVYPKERVAGKLMQYLFNHYEGLIENHYKISPRLQRPIQIT
DTFIIFEMIAKVRKWYMNDDLLDYDRVIDAFMRDIIANEFNKVSFERILEVVPEEMEKASKIKNEKAIEDISDLW

Sequences:

>Translated_315_residues
MSAEFN*FPGHMNKTLKNIEEKIPVVDLVIEILDARAPYSSRNLTFSKILKNKPILYVLSKADIADPNITKE*VEFYEKK
NNTVMVLDDKQKNIVKPLIDLINKATKEKQEKDKAKGMVNSLINVLVIGIPNVGKSTFINRLIKNKSVKAGNKPGLTRGI
QLIHLSQFISLLDTPGVLPAKLENETVATNICAINSIKEDVYPKERVAGKLMQYLFNHYEGLIENHYKISPRLQRPIQIT
DTFIIFEMIAKVRK*YMNDDLLDYDRVIDAFMRDIIANEFNKVSFERILEVVPEEMEKASKIKNEKAIEDISDL*
>Mature_314_residues
SAEFN*FPGHMNKTLKNIEEKIPVVDLVIEILDARAPYSSRNLTFSKILKNKPILYVLSKADIADPNITKE*VEFYEKKN
NTVMVLDDKQKNIVKPLIDLINKATKEKQEKDKAKGMVNSLINVLVIGIPNVGKSTFINRLIKNKSVKAGNKPGLTRGIQ
LIHLSQFISLLDTPGVLPAKLENETVATNICAINSIKEDVYPKERVAGKLMQYLFNHYEGLIENHYKISPRLQRPIQITD
TFIIFEMIAKVRK*YMNDDLLDYDRVIDAFMRDIIANEFNKVSFERILEVVPEEMEKASKIKNEKAIEDISDL*

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=236, Percent_Identity=33.4745762711864, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI296317324, Length=281, Percent_Identity=26.3345195729537, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI9506611, Length=281, Percent_Identity=26.3345195729537, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193211047, Length=189, Percent_Identity=35.4497354497354, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17534827, Length=177, Percent_Identity=31.0734463276836, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI25143545, Length=333, Percent_Identity=24.9249249249249, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115535155, Length=333, Percent_Identity=24.9249249249249, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71982363, Length=191, Percent_Identity=30.8900523560209, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323744, Length=221, Percent_Identity=27.6018099547511, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324381, Length=226, Percent_Identity=26.1061946902655, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85815858, Length=227, Percent_Identity=27.3127753303965, Blast_Score=92, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 35462; Mature: 35331

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEFNFPGHMNKTLKNIEEKIPVVDLVIEILDARAPYSSRNLTFSKILKNKPILYVLSK
CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEC
ADIADPNITKEVEFYEKKNNTVMVLDDKQKNIVKPLIDLINKATKEKQEKDKAKGMVNSL
CCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INVLVIGIPNVGKSTFINRLIKNKSVKAGNKPGLTRGIQLIHLSQFISLLDTPGVLPAKL
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
ENETVATNICAINSIKEDVYPKERVAGKLMQYLFNHYEGLIENHYKISPRLQRPIQITDT
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHH
FIIFEMIAKVRKYMNDDLLDYDRVIDAFMRDIIANEFNKVSFERILEVVPEEMEKASKIK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEKAIEDISDL
HHHHHHHHHCC
>Mature Secondary Structure 
SAEFNFPGHMNKTLKNIEEKIPVVDLVIEILDARAPYSSRNLTFSKILKNKPILYVLSK
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEEC
ADIADPNITKEVEFYEKKNNTVMVLDDKQKNIVKPLIDLINKATKEKQEKDKAKGMVNSL
CCCCCCCCCHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INVLVIGIPNVGKSTFINRLIKNKSVKAGNKPGLTRGIQLIHLSQFISLLDTPGVLPAKL
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
ENETVATNICAINSIKEDVYPKERVAGKLMQYLFNHYEGLIENHYKISPRLQRPIQITDT
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHH
FIIFEMIAKVRKYMNDDLLDYDRVIDAFMRDIIANEFNKVSFERILEVVPEEMEKASKIK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEKAIEDISDL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]