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The map label for this gene is amiC [H]

Identifier: 50364909

GI number: 50364909

Start: 114737

End: 116071

Strand: Direct

Name: amiC [H]

Synonym: Mfl094

Alternate gene names: 50364909

Gene position: 114737-116071 (Clockwise)

Preceding gene: 50364907

Following gene: 50364910

Centisome position: 14.46

GC content: 29.89

Gene sequence:

>1335_bases
ATGATTAAATCAAAAAACAAAAGCACTTTAAAAAACTTTAACTTAGATGTGTTAGATTTAGATCTAAATGAAGAGTTAAT
TTATGCACAGCCTACATTTTGAAGAACCGTTTCATATAGATTCGATGAATTAAAAGAAGAGGCTTCAAAATATTTTAGAA
GACATCCACTTATAGGGTACTCTTTTAAACGTATTGTTTATGGGCTACTAACATTAATTGTAAGTATTGCAATAGTTTTC
TTTTTAGTTAACTTTGTAACACCAGATTCTTCATATTTACCAGATGTATCTGAATTAGGGAAAATGGGAATTGGTACATC
AGGACCAAAATATGACGCATTTTTACAAACAAGATTAGAATTATTTGGTGTTAGTGGTAATGCTATAGAAAGATTATTAA
GATATTTCAAAAACATTATTCCGTTTATTCCAAAACATATTTTAGTAGGGCAATCAGTTATATTCCCTAATGCTTCTGAG
TTATCTAATTCTCAAATTATTATTAACACAGTTTTATTTACTGGTGGGCAAGTTGATGGTTTATTAAAATCAGGATCAAA
AGAATTAATTGATGCAATTACAATCAGCGCATCGTATAAAACAGTTTGAATATACTTAGGAGTTGTTAAATCAAGTTCAA
TGGGTATGCCAGGTTCAACAGAAGTAACAAGCTTATTTGCAAGTGCAATTCCATACTCATTTGGTATTGGAAGTGTAGCT
GTTTTATTCTCTTATTTAATTGGTATACCTTTAGGTATTGAAGCAGCCAAAAGAAAAGGTAAAGCAACTGATGGGGCAAT
CAATGGTACTGCTACATTCTTATTAGCAGTTCCTTCATTGGTTATTGTTATCGCTATTTATTTAATATCAATTTTAGTTT
TTGGTCATTCTTCTATTTTTAGTTCTGGATCATTCTGAACAAGATTTTGACCTGTTGTTGCATTAGTTATATTAATGGCA
CCAACAACAATTATTTTAACTAGACGTTATGTTGTCGACGAAATGACAGCTGATTACACTAAATTTGCCTATGCAAAAGG
TTTAGGAGAATCAAAAGTATTTTATGTACATATCTTTAGAAATGCTGGAGTAAGAATTTTACGTGAATTACCTTTAGATT
TAGCATTTACATTATTTGGAGCTTCAATTTTAACTGAAACTCAATGAAACATACCGGGTATGTCTCAATTAATTATTAAC
GGTGTTAATAACCGTGACTCATTTGTTATTTTAGGATTCATAACATTTGCATCATTAGTAAAAATTGCAGCAACATTAGT
TTCTGATTTATTCATGGTATTAATGGATCCAAGAGTTAAATTAAGTGGTAGATAG

Upstream 100 bases:

>100_bases
TTTTTAATTCATTCTTTGCCATATTTGCTCCTTTCAATTGACTTACATACTCTTTTAGTTTATCATATTAAAAAATAATA
TAAATAAGGAGGTTAAGACC

Downstream 100 bases:

>100_bases
AAAGAGGGGAAAAATATGATAAACATCGATAAAGAAAAATTTGAACGCGAAAATAAAGTTAATTTTGAAGAAATTGACGA
AAAAATGTTTGAAGTAGTCG

Product: oligopeptide ABC transporter permease component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MIKSKNKSTLKNFNLDVLDLDLNEELIYAQPTFWRTVSYRFDELKEEASKYFRRHPLIGYSFKRIVYGLLTLIVSIAIVF
FLVNFVTPDSSYLPDVSELGKMGIGTSGPKYDAFLQTRLELFGVSGNAIERLLRYFKNIIPFIPKHILVGQSVIFPNASE
LSNSQIIINTVLFTGGQVDGLLKSGSKELIDAITISASYKTVWIYLGVVKSSSMGMPGSTEVTSLFASAIPYSFGIGSVA
VLFSYLIGIPLGIEAAKRKGKATDGAINGTATFLLAVPSLVIVIAIYLISILVFGHSSIFSSGSFWTRFWPVVALVILMA
PTTIILTRRYVVDEMTADYTKFAYAKGLGESKVFYVHIFRNAGVRILRELPLDLAFTLFGASILTETQWNIPGMSQLIIN
GVNNRDSFVILGFITFASLVKIAATLVSDLFMVLMDPRVKLSGR

Sequences:

>Translated_444_residues
MIKSKNKSTLKNFNLDVLDLDLNEELIYAQPTF*RTVSYRFDELKEEASKYFRRHPLIGYSFKRIVYGLLTLIVSIAIVF
FLVNFVTPDSSYLPDVSELGKMGIGTSGPKYDAFLQTRLELFGVSGNAIERLLRYFKNIIPFIPKHILVGQSVIFPNASE
LSNSQIIINTVLFTGGQVDGLLKSGSKELIDAITISASYKTV*IYLGVVKSSSMGMPGSTEVTSLFASAIPYSFGIGSVA
VLFSYLIGIPLGIEAAKRKGKATDGAINGTATFLLAVPSLVIVIAIYLISILVFGHSSIFSSGSF*TRF*PVVALVILMA
PTTIILTRRYVVDEMTADYTKFAYAKGLGESKVFYVHIFRNAGVRILRELPLDLAFTLFGASILTETQ*NIPGMSQLIIN
GVNNRDSFVILGFITFASLVKIAATLVSDLFMVLMDPRVKLSGR
>Mature_444_residues
MIKSKNKSTLKNFNLDVLDLDLNEELIYAQPTF*RTVSYRFDELKEEASKYFRRHPLIGYSFKRIVYGLLTLIVSIAIVF
FLVNFVTPDSSYLPDVSELGKMGIGTSGPKYDAFLQTRLELFGVSGNAIERLLRYFKNIIPFIPKHILVGQSVIFPNASE
LSNSQIIINTVLFTGGQVDGLLKSGSKELIDAITISASYKTV*IYLGVVKSSSMGMPGSTEVTSLFASAIPYSFGIGSVA
VLFSYLIGIPLGIEAAKRKGKATDGAINGTATFLLAVPSLVIVIAIYLISILVFGHSSIFSSGSF*TRF*PVVALVILMA
PTTIILTRRYVVDEMTADYTKFAYAKGLGESKVFYVHIFRNAGVRILRELPLDLAFTLFGASILTETQ*NIPGMSQLIIN
GVNNRDSFVILGFITFASLVKIAATLVSDLFMVLMDPRVKLSGR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=247, Percent_Identity=27.1255060728745, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787497, Length=221, Percent_Identity=23.5294117647059, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789965, Length=269, Percent_Identity=23.4200743494424, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789888, Length=214, Percent_Identity=22.4299065420561, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787053, Length=223, Percent_Identity=25.5605381165919, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 48010; Mature: 48010

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSKNKSTLKNFNLDVLDLDLNEELIYAQPTFRTVSYRFDELKEEASKYFRRHPLIGYS
CCCCCCCHHHHHCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FKRIVYGLLTLIVSIAIVFFLVNFVTPDSSYLPDVSELGKMGIGTSGPKYDAFLQTRLEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH
FGVSGNAIERLLRYFKNIIPFIPKHILVGQSVIFPNASELSNSQIIINTVLFTGGQVDGL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHCCCCEEEEEEEEECCCCHHHH
LKSGSKELIDAITISASYKTVIYLGVVKSSSMGMPGSTEVTSLFASAIPYSFGIGSVAVL
HHCCCHHHHHHHEEECCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
FSYLIGIPLGIEAAKRKGKATDGAINGTATFLLAVPSLVIVIAIYLISILVFGHSSIFSS
HHHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
GSFTRFPVVALVILMAPTTIILTRRYVVDEMTADYTKFAYAKGLGESKVFYVHIFRNAGV
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCH
RILRELPLDLAFTLFGASILTETQNIPGMSQLIINGVNNRDSFVILGFITFASLVKIAAT
HHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHH
LVSDLFMVLMDPRVKLSGR
HHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MIKSKNKSTLKNFNLDVLDLDLNEELIYAQPTFRTVSYRFDELKEEASKYFRRHPLIGYS
CCCCCCCHHHHHCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FKRIVYGLLTLIVSIAIVFFLVNFVTPDSSYLPDVSELGKMGIGTSGPKYDAFLQTRLEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHH
FGVSGNAIERLLRYFKNIIPFIPKHILVGQSVIFPNASELSNSQIIINTVLFTGGQVDGL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHCCCCEEEEEEEEECCCCHHHH
LKSGSKELIDAITISASYKTVIYLGVVKSSSMGMPGSTEVTSLFASAIPYSFGIGSVAVL
HHCCCHHHHHHHEEECCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
FSYLIGIPLGIEAAKRKGKATDGAINGTATFLLAVPSLVIVIAIYLISILVFGHSSIFSS
HHHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
GSFTRFPVVALVILMAPTTIILTRRYVVDEMTADYTKFAYAKGLGESKVFYVHIFRNAGV
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCH
RILRELPLDLAFTLFGASILTETQNIPGMSQLIINGVNNRDSFVILGFITFASLVKIAAT
HHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHH
LVSDLFMVLMDPRVKLSGR
HHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2352474; 11463916 [H]