| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is 50364847
Identifier: 50364847
GI number: 50364847
Start: 43810
End: 44535
Strand: Direct
Name: 50364847
Synonym: Mfl032
Alternate gene names: NA
Gene position: 43810-44535 (Clockwise)
Preceding gene: 50364845
Following gene: 50364848
Centisome position: 5.52
GC content: 24.38
Gene sequence:
>726_bases ATGGAAAATTTTTACGAAAAACTAGAGTATCTATCAAAAGGTTATGTTGATTCTGCTTATAAAAATATGTCAGTAAGTTT ATTGTCATCAATTAGGAATGGGAATTTTAAAAAATCAAAAGAGTTGGCCGAAGAATGTTTTGTAAGTGAATCAACTGTTA CAAAGTTTAGTAAGTACTTGGGTTTTTCTGGATATAGAGAAATGATATTTTTTTTAAAAGAAGACCATAATTCTTTTTTT GTTAAAAAGACAACTAAAAAAAATAAGAATTTTTCTAGCTTAATAGAATGAATATCATTGCATGAAGACTTTATTGATAA ATTATGCAAAGCAATTGAAGTAAAGAATGTACAAGTTAATATATTTGGCTCATATCAGTTACAGGAATCTATTAGTTTAT TGAATAAACTTTTACTTTCATTTGACATTGATTCTAAAATACTTTATCAAAATGTTTTATTTGCTAACACTAAAATTTCA AAGCAAGCTGTAAACATTATATTTTTTTCTGGAAGAGATAACGAAACTTTAGAAATATTTTTGCAAGAAATAAATAAAAG CAAAAAGCAAATAAAAAACTTTTTAGTTATTAGTGAAAAACAAAAGAATAAAGTTAAGTTTGAATGCGAACAAATACAAT TTAGTCAGGATCATTCTTTTGTTAACAGAAACTTATCTGTTATGATGATGTGTCATGAAATAGCAAATAAATTGTCGTTA AAGTAA
Upstream 100 bases:
>100_bases TTTGTATATAATTAATATAAGTTTTAATTTATTGAAATGTGTAAAAAATATTTTTTAAGTAAACTACTTTACTAATCTAA AATTTATTTCTAGGAGGATT
Downstream 100 bases:
>100_bases TTATTAAATAAAGACAAGTACTTTACAAAAAGTAGGGCTTGTTTTTTTTTTTTTTTTGCTTTCTCCAAAATAGAACAATA AATTGGAAAATATTATTGAA
Product: putative transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MENFYEKLEYLSKGYVDSAYKNMSVSLLSSIRNGNFKKSKELAEECFVSESTVTKFSKYLGFSGYREMIFFLKEDHNSFF VKKTTKKNKNFSSLIEWISLHEDFIDKLCKAIEVKNVQVNIFGSYQLQESISLLNKLLLSFDIDSKILYQNVLFANTKIS KQAVNIIFFSGRDNETLEIFLQEINKSKKQIKNFLVISEKQKNKVKFECEQIQFSQDHSFVNRNLSVMMMCHEIANKLSL K
Sequences:
>Translated_241_residues MENFYEKLEYLSKGYVDSAYKNMSVSLLSSIRNGNFKKSKELAEECFVSESTVTKFSKYLGFSGYREMIFFLKEDHNSFF VKKTTKKNKNFSSLIE*ISLHEDFIDKLCKAIEVKNVQVNIFGSYQLQESISLLNKLLLSFDIDSKILYQNVLFANTKIS KQAVNIIFFSGRDNETLEIFLQEINKSKKQIKNFLVISEKQKNKVKFECEQIQFSQDHSFVNRNLSVMMMCHEIANKLSL K >Mature_241_residues MENFYEKLEYLSKGYVDSAYKNMSVSLLSSIRNGNFKKSKELAEECFVSESTVTKFSKYLGFSGYREMIFFLKEDHNSFF VKKTTKKNKNFSSLIE*ISLHEDFIDKLCKAIEVKNVQVNIFGSYQLQESISLLNKLLLSFDIDSKILYQNVLFANTKIS KQAVNIIFFSGRDNETLEIFLQEINKSKKQIKNFLVISEKQKNKVKFECEQIQFSQDHSFVNRNLSVMMMCHEIANKLSL K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28005; Mature: 28005
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS51071 HTH_RPIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFYEKLEYLSKGYVDSAYKNMSVSLLSSIRNGNFKKSKELAEECFVSESTVTKFSKYL CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH GFSGYREMIFFLKEDHNSFFVKKTTKKNKNFSSLIEISLHEDFIDKLCKAIEVKNVQVNI CCCCHHHHHHHHEECCCEEEEEECCCCCCCHHHHEEHHHHHHHHHHHHHHHHHCCEEEEE FGSYQLQESISLLNKLLLSFDIDSKILYQNVLFANTKISKQAVNIIFFSGRDNETLEIFL EECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHH QEINKSKKQIKNFLVISEKQKNKVKFECEQIQFSQDHSFVNRNLSVMMMCHEIANKLSLK HHHHHHHHHHHHHHEEECCCCCCEEEEHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MENFYEKLEYLSKGYVDSAYKNMSVSLLSSIRNGNFKKSKELAEECFVSESTVTKFSKYL CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH GFSGYREMIFFLKEDHNSFFVKKTTKKNKNFSSLIEISLHEDFIDKLCKAIEVKNVQVNI CCCCHHHHHHHHEECCCEEEEEECCCCCCCHHHHEEHHHHHHHHHHHHHHHHHCCEEEEE FGSYQLQESISLLNKLLLSFDIDSKILYQNVLFANTKISKQAVNIIFFSGRDNETLEIFL EECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHH QEINKSKKQIKNFLVISEKQKNKVKFECEQIQFSQDHSFVNRNLSVMMMCHEIANKLSLK HHHHHHHHHHHHHHEEECCCCCCEEEEHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA