Click here to switch to the map view.

The map label for this gene is 50086614

Identifier: 50086614

GI number: 50086614

Start: 3588370

End: 3589977

Strand: Reverse

Name: 50086614

Synonym: ACIAD3676

Alternate gene names: NA

Gene position: 3589977-3588370 (Counterclockwise)

Preceding gene: 50086615

Following gene: 50086613

Centisome position: 99.76

GC content: 45.09

Gene sequence:

>1608_bases
TTGATGATGAAATCATTATTGATGACACCGCTGTCGCACCGTGTGCTTAAGCTGTTTTGTCGGCAGACAGACCAGCGCTT
TCAAAAGCAAAAAAATGCGCTGCAACAGGTACAACGTGAAAAGTTACAGCAGATTTTGAAAATATCTACACTTGCTCAAG
CGGCAGGTGTAACCGATTACGAACAGTTTCGTCAGCAGTTTCCCGTGACGCGATATACCCATTGGCGTGACAGAATTCAT
GAATGTCGCGCACAGCAAAGTACATTATCCAACAGTAAACTGGTGAGATACCAACCGACCAGCGGGTCGAGTGAACAAAT
CAAATTTATTCCTTATACGCAGGCTTTTCTGGATGAACTCGATGCTGCTATTGCGCCGTGGTTATCCAGTATGTACCGTA
AATGCAGTACACTCGGTCAGGGAACGCATTATTGGTCGGTTTCATGGTTGCCTGAAAGCCAGCGTGAAGTGTTGAAAAAT
GAAAATCTGAATGATGACAGTGCTTTGCTTGGAGTTGGTAAGCGCTTGCTTTCCAAATTTACCCAGACGGTACCCAGTGA
TGTTTCATTTGCAGCACACGCAGATGATGCCCTGTTTGCAACACTTTGTTATCTGGTTGCAGATCAGGATTTAGCAATGA
TATCGGTGTGGAGCCCGACCTTTGCTTTGCAATTACTTGAAAAACTTACCGAACAGTCTCATGAAATCGCATTAGTACTT
GAAACAGGTCAATGGCAGACACGTGCAGCATCACTCAAAGGTGTTAAAGCACCGTATAATTCTGCCCGTGCTAGCTTGCT
CAGGCAGCTCATGAAAAAAGATACGCTGGATTATCAACAGTTATGGCCAAAACTGAGTCTGGTTTCAAGCTGGGATACCG
CAGGCTCGAAACAATGGGCACAACTCCTACAGTCCGAACTACCTTTTGCACAGTTTGAAGGAAAGGGACTTTGGGCCACT
GAAGGCGTAGTGACAATTCCATACGATGACCTGTATCCACTGGCCTATCATAGCCATTTTTACGAGTTTGAATATCTGGC
AGGCGAACACCAAGGTGACATTATTCCTTCTTGGCAACTTAAGCTCAACGATCTGGTCAGCCCTGTTCTGACCTCTGGAA
ATGGCTTATTGCGCTATTGTCTGGATGATTGTTTACGCGTGACTGGATTTTATGGGCAAGTGCCTTGCTTTGAATTTCAG
GGACGGCGTTTTGGCGTAGATTTGGTGGGAGAAAAACTTTCTCCAGAAGTTGCGCACAAGTTATTAACTAGGCTTAATCA
GCAGCATATTCAGGCAATTTCATTATTTGCAGTAGATACCCAACAACAAGCCAAGCCCTTTTATGCTGTACTGGTGGAGG
GAGAGGCAACGTCGCCACTGTCTGTCGATGAGATTGATCAGGCATTGCGTGAGCATTTCCATTATGAACTGGCACGTGAT
CTGGGGCAGCTTGATCAGCCACAAATCTTTTATGTTGATAATGGCTGGGAAGGTTATAAACAGGTCGTGGTGCGTGAAGG
TATGATTGAGGGCAATATCAAGCCTGAGCCATTAAAAAAAGTGACCTTATCGAGCCTTGAACAATTGTCTTGTGCTGAGT
CTGTATAA

Upstream 100 bases:

>100_bases
ATTTTATACGATTTCCATTTCGTTACGTAACAAAACCTGCGAGTAAGGGCAAGCATCCTGTTAAAAATCGTCCACCTTTG
GATACACCAGAAGGGGCGTC

Downstream 100 bases:

>100_bases
CCAAGCACTGTGGAAGCTTTCATGAAACAATTACATTGGTTTAGTCTGGTTGGCTTATTGGTAGCACCAGCGCTTTGGGG
CATGACATTGGATGAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Auxin-Responsive GH3-Related Protein; GH3 Auxin-Responsive Promoter Family Protein; Auxin-Responsive-Like Protein; GH3 Auxin-Responsive Promoter Superfamily

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MMMKSLLMTPLSHRVLKLFCRQTDQRFQKQKNALQQVQREKLQQILKISTLAQAAGVTDYEQFRQQFPVTRYTHWRDRIH
ECRAQQSTLSNSKLVRYQPTSGSSEQIKFIPYTQAFLDELDAAIAPWLSSMYRKCSTLGQGTHYWSVSWLPESQREVLKN
ENLNDDSALLGVGKRLLSKFTQTVPSDVSFAAHADDALFATLCYLVADQDLAMISVWSPTFALQLLEKLTEQSHEIALVL
ETGQWQTRAASLKGVKAPYNSARASLLRQLMKKDTLDYQQLWPKLSLVSSWDTAGSKQWAQLLQSELPFAQFEGKGLWAT
EGVVTIPYDDLYPLAYHSHFYEFEYLAGEHQGDIIPSWQLKLNDLVSPVLTSGNGLLRYCLDDCLRVTGFYGQVPCFEFQ
GRRFGVDLVGEKLSPEVAHKLLTRLNQQHIQAISLFAVDTQQQAKPFYAVLVEGEATSPLSVDEIDQALREHFHYELARD
LGQLDQPQIFYVDNGWEGYKQVVVREGMIEGNIKPEPLKKVTLSSLEQLSCAESV

Sequences:

>Translated_535_residues
MMMKSLLMTPLSHRVLKLFCRQTDQRFQKQKNALQQVQREKLQQILKISTLAQAAGVTDYEQFRQQFPVTRYTHWRDRIH
ECRAQQSTLSNSKLVRYQPTSGSSEQIKFIPYTQAFLDELDAAIAPWLSSMYRKCSTLGQGTHYWSVSWLPESQREVLKN
ENLNDDSALLGVGKRLLSKFTQTVPSDVSFAAHADDALFATLCYLVADQDLAMISVWSPTFALQLLEKLTEQSHEIALVL
ETGQWQTRAASLKGVKAPYNSARASLLRQLMKKDTLDYQQLWPKLSLVSSWDTAGSKQWAQLLQSELPFAQFEGKGLWAT
EGVVTIPYDDLYPLAYHSHFYEFEYLAGEHQGDIIPSWQLKLNDLVSPVLTSGNGLLRYCLDDCLRVTGFYGQVPCFEFQ
GRRFGVDLVGEKLSPEVAHKLLTRLNQQHIQAISLFAVDTQQQAKPFYAVLVEGEATSPLSVDEIDQALREHFHYELARD
LGQLDQPQIFYVDNGWEGYKQVVVREGMIEGNIKPEPLKKVTLSSLEQLSCAESV
>Mature_535_residues
MMMKSLLMTPLSHRVLKLFCRQTDQRFQKQKNALQQVQREKLQQILKISTLAQAAGVTDYEQFRQQFPVTRYTHWRDRIH
ECRAQQSTLSNSKLVRYQPTSGSSEQIKFIPYTQAFLDELDAAIAPWLSSMYRKCSTLGQGTHYWSVSWLPESQREVLKN
ENLNDDSALLGVGKRLLSKFTQTVPSDVSFAAHADDALFATLCYLVADQDLAMISVWSPTFALQLLEKLTEQSHEIALVL
ETGQWQTRAASLKGVKAPYNSARASLLRQLMKKDTLDYQQLWPKLSLVSSWDTAGSKQWAQLLQSELPFAQFEGKGLWAT
EGVVTIPYDDLYPLAYHSHFYEFEYLAGEHQGDIIPSWQLKLNDLVSPVLTSGNGLLRYCLDDCLRVTGFYGQVPCFEFQ
GRRFGVDLVGEKLSPEVAHKLLTRLNQQHIQAISLFAVDTQQQAKPFYAVLVEGEATSPLSVDEIDQALREHFHYELARD
LGQLDQPQIFYVDNGWEGYKQVVVREGMIEGNIKPEPLKKVTLSSLEQLSCAESV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60903; Mature: 60903

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMKSLLMTPLSHRVLKLFCRQTDQRFQKQKNALQQVQREKLQQILKISTLAQAAGVTDY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EQFRQQFPVTRYTHWRDRIHECRAQQSTLSNSKLVRYQPTSGSSEQIKFIPYTQAFLDEL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECHHHHHHHHH
DAAIAPWLSSMYRKCSTLGQGTHYWSVSWLPESQREVLKNENLNDDSALLGVGKRLLSKF
HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TQTVPSDVSFAAHADDALFATLCYLVADQDLAMISVWSPTFALQLLEKLTEQSHEIALVL
HHHCCCCCCCHHCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEE
ETGQWQTRAASLKGVKAPYNSARASLLRQLMKKDTLDYQQLWPKLSLVSSWDTAGSKQWA
ECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCHHHH
QLLQSELPFAQFEGKGLWATEGVVTIPYDDLYPLAYHSHFYEFEYLAGEHQGDIIPSWQL
HHHHHHCCHHHCCCCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
KLNDLVSPVLTSGNGLLRYCLDDCLRVTGFYGQVPCFEFQGRRFGVDLVGEKLSPEVAHK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCEECHHHHCCCCCHHHHHH
LLTRLNQQHIQAISLFAVDTQQQAKPFYAVLVEGEATSPLSVDEIDQALREHFHYELARD
HHHHHHHHHHHHHHHEEECCHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
LGQLDQPQIFYVDNGWEGYKQVVVREGMIEGNIKPEPLKKVTLSSLEQLSCAESV
HCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMMKSLLMTPLSHRVLKLFCRQTDQRFQKQKNALQQVQREKLQQILKISTLAQAAGVTDY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EQFRQQFPVTRYTHWRDRIHECRAQQSTLSNSKLVRYQPTSGSSEQIKFIPYTQAFLDEL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECHHHHHHHHH
DAAIAPWLSSMYRKCSTLGQGTHYWSVSWLPESQREVLKNENLNDDSALLGVGKRLLSKF
HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TQTVPSDVSFAAHADDALFATLCYLVADQDLAMISVWSPTFALQLLEKLTEQSHEIALVL
HHHCCCCCCCHHCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEE
ETGQWQTRAASLKGVKAPYNSARASLLRQLMKKDTLDYQQLWPKLSLVSSWDTAGSKQWA
ECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCHHHH
QLLQSELPFAQFEGKGLWATEGVVTIPYDDLYPLAYHSHFYEFEYLAGEHQGDIIPSWQL
HHHHHHCCHHHCCCCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
KLNDLVSPVLTSGNGLLRYCLDDCLRVTGFYGQVPCFEFQGRRFGVDLVGEKLSPEVAHK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCEECHHHHCCCCCHHHHHH
LLTRLNQQHIQAISLFAVDTQQQAKPFYAVLVEGEATSPLSVDEIDQALREHFHYELARD
HHHHHHHHHHHHHHHEEECCHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
LGQLDQPQIFYVDNGWEGYKQVVVREGMIEGNIKPEPLKKVTLSSLEQLSCAESV
HCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA