Click here to switch to the map view.

The map label for this gene is bepC [H]

Identifier: 50086613

GI number: 50086613

Start: 3587047

End: 3588360

Strand: Reverse

Name: bepC [H]

Synonym: ACIAD3675

Alternate gene names: 50086613

Gene position: 3588360-3587047 (Counterclockwise)

Preceding gene: 50086614

Following gene: 50086612

Centisome position: 99.71

GC content: 44.9

Gene sequence:

>1314_bases
GTGGAAGCTTTCATGAAACAATTACATTGGTTTAGTCTGGTTGGCTTATTGGTAGCACCAGCGCTTTGGGGCATGACATT
GGATGAGGCGGTTCAACATGCCTTGACTTATGAACCGCAGCTTAAAATTAATGATCTACAAGTTGGGCGTGCCGAGGCTG
AATTACAGCAGGCGCAACACCGATACGGACTGAATGTCAGTGTTGAAGGACAGCTTGGTGTTGGACAGATTAACAATCCG
CCAACTTATAGTCCTTTATTTTCAATTGATGAGCGCTTTCGAAATACCCGTAGTCTGATGCTCAAGTTTGATTATCCTTT
ATATACTGCAGGCCGTGAGCGTATTGGAATTGAAATGGCACACATGCAGGTGGCTGCACAGTCACAGGCATTCGCCAATC
AACAGTCTGCAACTGTATTGCAAACCGTACAGGCATACACCGATGTACTTAGACAACAAGCAGTTTTAAAACTAAAAAAT
AAAGTGCAGGCGAATCTACAACAGTCACTTTCAGATGCACAGAAGCGTTTAAATGCAGGCGTGATCACCCGTGCCGATTT
GGCTCAGATTCAGGCCCAGCTTGCTCAATCGCAGGCAGACAGTGTACGGGCAGAGTCGCAGTTAAGCATCAGTCAGACCC
GTTTTTATCAGCTAACAGGTCTGACAGCACAAGTGCTGGATACACCCCAAGATTTACCCGCCATTCCTGGCAATGTCGAC
GATGTTATCTATGCAATAGAACAGCATCCCTCATTACAGCAGGCCCGATTTGAACAGCAAGTGGCAGAAAAGCAATATCG
TTTGAGTAAACTTGAGTTGAGACCCTCAATTGGACTGACTGGGCGTGTTGGAACACAACATGAAATTAAGGATGGTGAAA
GTAAGGGCTATCTGGTGGGTTTAAAGGTTGATGTGCCCATTTATGACAATGGTCTCAATAAGGCCAATCGCCAAAAAGCC
AATGTTGAGTTAGAGCTTGCGACACAAAAAATCAATGCGTTACAGCAGGCATTAACACAACAGGCACAGGCGACTTACTT
TCAAATTCAGGCGGTGCGTCAAAATAAGCGTGCGCTAGAACAGGCCATCAATGCAGCTTCAATCGCTCTTCAGTTTATGA
AGCGTGAGCAGGAATTTGGAACCAAAACCACCACAGATGTACTCAATGCAGAACAGAGTCTACTTGATGTACAAACTCAA
AAAATTAGCAACCAACAAGATGAAGTAGTTTTGACCTATCAACTGCTGGATCAAATGGGACGACTCTCGGCTCTGTTTCC
AATAAATACGCATGATTCCGCGCTCAAACCTTAA

Upstream 100 bases:

>100_bases
AGGTATGATTGAGGGCAATATCAAGCCTGAGCCATTAAAAAAAGTGACCTTATCGAGCCTTGAACAATTGTCTTGTGCTG
AGTCTGTATAACCAAGCACT

Downstream 100 bases:

>100_bases
GGATCCGATCAAATGAATATTGCAGAACAGTCATCAAAACAAAATCAGGATTCGATCGTAGTTCGCCATATCAATGAGTC
GGATGATCAAGAGCTACGTC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MEAFMKQLHWFSLVGLLVAPALWGMTLDEAVQHALTYEPQLKINDLQVGRAEAELQQAQHRYGLNVSVEGQLGVGQINNP
PTYSPLFSIDERFRNTRSLMLKFDYPLYTAGRERIGIEMAHMQVAAQSQAFANQQSATVLQTVQAYTDVLRQQAVLKLKN
KVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQTRFYQLTGLTAQVLDTPQDLPAIPGNVD
DVIYAIEQHPSLQQARFEQQVAEKQYRLSKLELRPSIGLTGRVGTQHEIKDGESKGYLVGLKVDVPIYDNGLNKANRQKA
NVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQ
KISNQQDEVVLTYQLLDQMGRLSALFPINTHDSALKP

Sequences:

>Translated_437_residues
MEAFMKQLHWFSLVGLLVAPALWGMTLDEAVQHALTYEPQLKINDLQVGRAEAELQQAQHRYGLNVSVEGQLGVGQINNP
PTYSPLFSIDERFRNTRSLMLKFDYPLYTAGRERIGIEMAHMQVAAQSQAFANQQSATVLQTVQAYTDVLRQQAVLKLKN
KVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQTRFYQLTGLTAQVLDTPQDLPAIPGNVD
DVIYAIEQHPSLQQARFEQQVAEKQYRLSKLELRPSIGLTGRVGTQHEIKDGESKGYLVGLKVDVPIYDNGLNKANRQKA
NVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQ
KISNQQDEVVLTYQLLDQMGRLSALFPINTHDSALKP
>Mature_437_residues
MEAFMKQLHWFSLVGLLVAPALWGMTLDEAVQHALTYEPQLKINDLQVGRAEAELQQAQHRYGLNVSVEGQLGVGQINNP
PTYSPLFSIDERFRNTRSLMLKFDYPLYTAGRERIGIEMAHMQVAAQSQAFANQQSATVLQTVQAYTDVLRQQAVLKLKN
KVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQTRFYQLTGLTAQVLDTPQDLPAIPGNVD
DVIYAIEQHPSLQQARFEQQVAEKQYRLSKLELRPSIGLTGRVGTQHEIKDGESKGYLVGLKVDVPIYDNGLNKANRQKA
NVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQ
KISNQQDEVVLTYQLLDQMGRLSALFPINTHDSALKP

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=333, Percent_Identity=25.8258258258258, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 48809; Mature: 48809

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAFMKQLHWFSLVGLLVAPALWGMTLDEAVQHALTYEPQLKINDLQVGRAEAELQQAQH
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECEECCHHHHHHHHHHH
RYGLNVSVEGQLGVGQINNPPTYSPLFSIDERFRNTRSLMLKFDYPLYTAGRERIGIEMA
HCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCEECCCCHHHCHHHH
HMQVAAQSQAFANQQSATVLQTVQAYTDVLRQQAVLKLKNKVQANLQQSLSDAQKRLNAG
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VITRADLAQIQAQLAQSQADSVRAESQLSISQTRFYQLTGLTAQVLDTPQDLPAIPGNVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEHHHCCHHHHHCCCCCCCCCCCCHH
DVIYAIEQHPSLQQARFEQQVAEKQYRLSKLELRPSIGLTGRVGTQHEIKDGESKGYLVG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LKVDVPIYDNGLNKANRQKANVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALE
EEEECCEECCCCCCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQKISNQQDEVVLTYQLLDQMG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHC
RLSALFPINTHDSALKP
CCEEEECCCCCCCCCCC
>Mature Secondary Structure
MEAFMKQLHWFSLVGLLVAPALWGMTLDEAVQHALTYEPQLKINDLQVGRAEAELQQAQH
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECEECCHHHHHHHHHHH
RYGLNVSVEGQLGVGQINNPPTYSPLFSIDERFRNTRSLMLKFDYPLYTAGRERIGIEMA
HCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCEECCCCHHHCHHHH
HMQVAAQSQAFANQQSATVLQTVQAYTDVLRQQAVLKLKNKVQANLQQSLSDAQKRLNAG
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VITRADLAQIQAQLAQSQADSVRAESQLSISQTRFYQLTGLTAQVLDTPQDLPAIPGNVD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEHHHCCHHHHHCCCCCCCCCCCCHH
DVIYAIEQHPSLQQARFEQQVAEKQYRLSKLELRPSIGLTGRVGTQHEIKDGESKGYLVG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEE
LKVDVPIYDNGLNKANRQKANVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALE
EEEECCEECCCCCCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQKISNQQDEVVLTYQLLDQMG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHC
RLSALFPINTHDSALKP
CCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]