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The map label for this gene is soxC [H]

Identifier: 50086435

GI number: 50086435

Start: 3398998

End: 3400200

Strand: Reverse

Name: soxC [H]

Synonym: ACIAD3474

Alternate gene names: 50086435

Gene position: 3400200-3398998 (Counterclockwise)

Preceding gene: 50086436

Following gene: 50086433

Centisome position: 94.49

GC content: 43.72

Gene sequence:

>1203_bases
CTGGTGATCAATTTTATCATGAATACCACAGCTGATTTTTCACTGCGCCATGATCCTACTTATATTGCACAACAATTGGC
TCAGGAATTTGCACAGACTGCAGCCGAGCGTGATAAGGCAGGTGGTACAGCGAAACATGAGCGAGATTTGATTCGAAAGA
GTGGATTATTAAGTCTCTCGATTCCACAGCAATACGGTGGAGCGGGTGCAGACTGGAACGTCATCTTTAAAACGATTCAG
ATCATTGCGCGCGTGGACAGTTCACTGGCACATATTTATGGGTTTCATCATTTACTGATTGCCACAGTTCAGCTTTTTGC
ACAGCCTGAGCAATATGCCAACTGGTTTCGTCAGACAGCGGAGCAAAATCTATTTTGGGGCAATACCCTGAATCCATTAG
ATGTTCGGACGCGTGTCGAGCAGATAAATGAACATGAATTTATTTTTCATGGTGATAAAAGCTTTTGTTCGGGTTCAATC
GACTCGGATATGTTGTTATGCTCAGGCTATACCGCAGAAAATAAGCTATTGATTGGAGTGATTCCCACCTCACGTGAAGG
GGTTGGTTTTCTGGGAGACTGGAATAATATGGGACAACGCCAGACAGATAGCGGCACCAGTCATTTTGAACACGTTAAAA
TTTTAAAACAAGAATTACTGTTAAACCCAGGACCACTCAGTACCCCTTATTCAAGTTTACGTCCTTTGATTGCTCAACTT
ATTTTTGTGCATTTATTTTTAGGTGTTGCCGAAGGGGCGTTTGAAATTGCCAAGCAAGTAGTCCAGCCACAAAAGGCGTG
GGGAAAATCTAAGGCAGAGCAAGCGATTGATGATCCATACATTCAAAAGCACTTTGCAGAGTTTTATGTACAACTGGAAA
GCGTACGTTTGCTCACAAAGAAAGCGCTTGATGCATTACAAAACGCATGGCAGCAAGTCGAAAGTCTGAGTGCAGAACAA
CGTGGAGAAGTGTCTATTGCGATTGCGACTGCCAAAATCGCCGCAACCCATACCAGTTTGTTTATTACCCAAAACATATT
TCAGGTGATGGGTGCAAGAGCCACTACCGCCAGCTTGAATCTGGATCGTTTCTGGCGCAACGTGCGCACTCAAACTTTGC
ATGACCCTGTCGATTACAAATATCAGGAAATCGGGGAATGGATTTTAACGGCTAAAGTCCCCGATCCGAGTTTTTACTCA
TAA

Upstream 100 bases:

>100_bases
CGAATAGACTTGCAGGGAAGTCTTTATATTTGTTGAAAAGTATTGCTGAAATTTGGATAAAGCACTGCACGGGTTTTTGT
TAGGCTAAACACACTTCTTT

Downstream 100 bases:

>100_bases
GATACAACATGATGCTTTTAAAGACTCAAGCTTGAATAAACTGGTGTGTCTTCTGAATAGTTGCAAAATTTGAGAGCGCA
GCTAAAAAAGCCGTTTGAAC

Product: FMNH2-dependent monooxygenase

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MVINFIMNTTADFSLRHDPTYIAQQLAQEFAQTAAERDKAGGTAKHERDLIRKSGLLSLSIPQQYGGAGADWNVIFKTIQ
IIARVDSSLAHIYGFHHLLIATVQLFAQPEQYANWFRQTAEQNLFWGNTLNPLDVRTRVEQINEHEFIFHGDKSFCSGSI
DSDMLLCSGYTAENKLLIGVIPTSREGVGFLGDWNNMGQRQTDSGTSHFEHVKILKQELLLNPGPLSTPYSSLRPLIAQL
IFVHLFLGVAEGAFEIAKQVVQPQKAWGKSKAEQAIDDPYIQKHFAEFYVQLESVRLLTKKALDALQNAWQQVESLSAEQ
RGEVSIAIATAKIAATHTSLFITQNIFQVMGARATTASLNLDRFWRNVRTQTLHDPVDYKYQEIGEWILTAKVPDPSFYS

Sequences:

>Translated_400_residues
MVINFIMNTTADFSLRHDPTYIAQQLAQEFAQTAAERDKAGGTAKHERDLIRKSGLLSLSIPQQYGGAGADWNVIFKTIQ
IIARVDSSLAHIYGFHHLLIATVQLFAQPEQYANWFRQTAEQNLFWGNTLNPLDVRTRVEQINEHEFIFHGDKSFCSGSI
DSDMLLCSGYTAENKLLIGVIPTSREGVGFLGDWNNMGQRQTDSGTSHFEHVKILKQELLLNPGPLSTPYSSLRPLIAQL
IFVHLFLGVAEGAFEIAKQVVQPQKAWGKSKAEQAIDDPYIQKHFAEFYVQLESVRLLTKKALDALQNAWQQVESLSAEQ
RGEVSIAIATAKIAATHTSLFITQNIFQVMGARATTASLNLDRFWRNVRTQTLHDPVDYKYQEIGEWILTAKVPDPSFYS
>Mature_400_residues
MVINFIMNTTADFSLRHDPTYIAQQLAQEFAQTAAERDKAGGTAKHERDLIRKSGLLSLSIPQQYGGAGADWNVIFKTIQ
IIARVDSSLAHIYGFHHLLIATVQLFAQPEQYANWFRQTAEQNLFWGNTLNPLDVRTRVEQINEHEFIFHGDKSFCSGSI
DSDMLLCSGYTAENKLLIGVIPTSREGVGFLGDWNNMGQRQTDSGTSHFEHVKILKQELLLNPGPLSTPYSSLRPLIAQL
IFVHLFLGVAEGAFEIAKQVVQPQKAWGKSKAEQAIDDPYIQKHFAEFYVQLESVRLLTKKALDALQNAWQQVESLSAEQ
RGEVSIAIATAKIAATHTSLFITQNIFQVMGARATTASLNLDRFWRNVRTQTLHDPVDYKYQEIGEWILTAKVPDPSFYS

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI21356377, Length=375, Percent_Identity=21.6, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44971; Mature: 44971

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVINFIMNTTADFSLRHDPTYIAQQLAQEFAQTAAERDKAGGTAKHERDLIRKSGLLSLS
CEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEE
IPQQYGGAGADWNVIFKTIQIIARVDSSLAHIYGFHHLLIATVQLFAQPEQYANWFRQTA
CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
EQNLFWGNTLNPLDVRTRVEQINEHEFIFHGDKSFCSGSIDSDMLLCSGYTAENKLLIGV
HCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCEEEEECCCCCCEEEEEE
IPTSREGVGFLGDWNNMGQRQTDSGTSHFEHVKILKQELLLNPGPLSTPYSSLRPLIAQL
ECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
IFVHLFLGVAEGAFEIAKQVVQPQKAWGKSKAEQAIDDPYIQKHFAEFYVQLESVRLLTK
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KALDALQNAWQQVESLSAEQRGEVSIAIATAKIAATHTSLFITQNIFQVMGARATTASLN
HHHHHHHHHHHHHHHHCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC
LDRFWRNVRTQTLHDPVDYKYQEIGEWILTAKVPDPSFYS
HHHHHHHHHHHHCCCCCCCHHHHHCCEEEEEECCCCCCCC
>Mature Secondary Structure
MVINFIMNTTADFSLRHDPTYIAQQLAQEFAQTAAERDKAGGTAKHERDLIRKSGLLSLS
CEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEE
IPQQYGGAGADWNVIFKTIQIIARVDSSLAHIYGFHHLLIATVQLFAQPEQYANWFRQTA
CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
EQNLFWGNTLNPLDVRTRVEQINEHEFIFHGDKSFCSGSIDSDMLLCSGYTAENKLLIGV
HCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCEEEEECCCCCCEEEEEE
IPTSREGVGFLGDWNNMGQRQTDSGTSHFEHVKILKQELLLNPGPLSTPYSSLRPLIAQL
ECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
IFVHLFLGVAEGAFEIAKQVVQPQKAWGKSKAEQAIDDPYIQKHFAEFYVQLESVRLLTK
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KALDALQNAWQQVESLSAEQRGEVSIAIATAKIAATHTSLFITQNIFQVMGARATTASLN
HHHHHHHHHHHHHHHHCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHCC
LDRFWRNVRTQTLHDPVDYKYQEIGEWILTAKVPDPSFYS
HHHHHHHHHHHHCCCCCCCHHHHHCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]