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The map label for this gene is trkD

Identifier: 50086384

GI number: 50086384

Start: 3325456

End: 3327336

Strand: Reverse

Name: trkD

Synonym: ACIAD3412

Alternate gene names: 50086384

Gene position: 3327336-3325456 (Counterclockwise)

Preceding gene: 50086386

Following gene: 50086382

Centisome position: 92.46

GC content: 44.98

Gene sequence:

>1881_bases
ATGCAAAGTTCTGCAAAAAAAGTTGCGCTACCCGCGATGACTTTAGCCGCGTTAGGGGTTGTATTTGGGGATATTGGGAC
AAGTCCCCTATATGCCTTTGCTCAGACATTCACCAGTGCGCATGTGAATATCTCTGAAGCGACAGTTTTTGGAATTTTAT
CTTTAATTTTCTGGTGTATCACACTTTCCATCAGCTTTAAGTATGTGAGCATTGTGATGCGTGCAGATAATAATGGCGAA
GGCGGTATCATGTCGCTTTTGGCATTATTACTGCGGATCAAGCAACTCGATTCCAACAAGAAAATTTATCTGATTGCGCT
GGGTTTTGTGGGAGCATCACTTTTCTTTGGTGATGGCATTATTACACCCGCAATTTCAGTGCTTTCTGCTATTGAAGGTC
TGAGTATTGCCACACCAGCCTTTGACCGTTGGCTCATTCCAATTGGCTTGGGTATCTTGACTGCGCTATTTATGGTGCAG
CGCCACGGGACGGCCACCATGGGTAAGTTCTTTGGCCCAATTACGATGCTCTGGTTTATCTCGATTGGTGCACTTGGGCT
GTACAGTATTATCCAGACACCACATATCCTATGGTTTATCAATCCGATTTGGGCAATTGAGTTTGCGATCCATCAGCCGT
TTGTTGCTTTCGTTGCCATGGGCTCAGTAGTACTGACCATGACGGGCGGTGAAGCACTATATGCAGATATGGGGCACTTT
GGGCGCATGCCTATCCGTCTGGCGTGGTTCATTGTGGTGTGTCCAAGCTTGATGCTGAATTATGCAGGTCAGGGCGCTTT
GCTACTGCGTGATCCACAGGCTGTTTCTAATCCATTTTATTTGCTGGTACCAGAATGGGCACTGTTTCCCATGATTGGGC
TGGCAACTGCTGCGGCCGTGATTGCATCGCAAGCTGTAATTACAGGTGTATTCTCAATGGTCAATCAGGCCATCCAGTTA
CGTTATTTACCACGTTTAACCGTCATTCATACGTCTGATGTTGAGCAGGGGCAGATCTATGTACCGTTTATTAACTGGGT
ACTGTATATCTCGGTATTTTTCCTGATTATTCTGTTTGAAAGTAGTAGTAATCTGGCCAGTGCCTATGGTGTGGCTGTCA
CCATGACCATGTTATGTGTCACCATTTTAATTTCTGTATTGGCCTATGGGGCCTGGGGATGGCCGTGGTGGAAAGTGACT
TTGTTTGCAGTTCCTTTTCTGGCGTTAGATGGAATTTTTGTGGCGTCAACATCGCTTAAGATTTTATCTGGTGGCTGGGT
ACCATTTGTGATTGGTGTGGTGGTGTTTACCATTTTGATGACTTGGAAGCGTGGTCGCGAGATAGTCTTTAATCGCCTTG
AAACAGATGCATTGCCTATTAGCCTGTTTATCAAGAGTATCGGCTCAAGCGCTGAAACACATTTTGTGCCAGGGGATGCA
GTTTTCTTAACCGGTAATCCAAATATTGTTCCGCATGCGATGCTGCATAACATTAAACACAATAAGGTATTGCATAGCCG
TAATATTATGGTGACGGTTTATACCGAAGATATTCCTTATGTGGCCAAAGAGCAGCGTGTTCAGTTAGAAAAAATGGATG
AGCATTTTTACCGAATCTCGATGTATTACGGTTTCAAGGATCAGCCAAACATTCCACAAGCATTGGAGCAGGCTTATCAA
GCGCTTGATCTTGAGTTTGACATGATGCAGATCAGCTTCTTTATTTCACGGGATCGTTTGATTCATACTGTGGGTGATGG
CATGTCGCCTTGGCGAGAAAAGCTGTTTATTTCGATGCAGCGCAATACCAGCCCTGTAAGCGACTTTTATCAAATTCCAC
CAAACCGCGTGGTTGAGATGGGCAGCCAAATCGAAATCTAG

Upstream 100 bases:

>100_bases
ATTTTGTATTCTGCCAAGCAGGAAACAATTGATTTGAACAAAAAGATTTTGCTTGATGTTAATATTGCGGAAAAATACTG
TTCCAAATTGAAGACAATAT

Downstream 100 bases:

>100_bases
ACGCTATGACGACGCAAGTTAGCTCAGTAAAAAACCAAGGCAAAAGGCCTTGGTTTTTTATGGGTATATTAGATTTTATT
CGGCAGCAGGTGGCATAGGT

Product: KUP family potassium transport system low affinity

Products: K (I) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MQSSAKKVALPAMTLAALGVVFGDIGTSPLYAFAQTFTSAHVNISEATVFGILSLIFWCITLSISFKYVSIVMRADNNGE
GGIMSLLALLLRIKQLDSNKKIYLIALGFVGASLFFGDGIITPAISVLSAIEGLSIATPAFDRWLIPIGLGILTALFMVQ
RHGTATMGKFFGPITMLWFISIGALGLYSIIQTPHILWFINPIWAIEFAIHQPFVAFVAMGSVVLTMTGGEALYADMGHF
GRMPIRLAWFIVVCPSLMLNYAGQGALLLRDPQAVSNPFYLLVPEWALFPMIGLATAAAVIASQAVITGVFSMVNQAIQL
RYLPRLTVIHTSDVEQGQIYVPFINWVLYISVFFLIILFESSSNLASAYGVAVTMTMLCVTILISVLAYGAWGWPWWKVT
LFAVPFLALDGIFVASTSLKILSGGWVPFVIGVVVFTILMTWKRGREIVFNRLETDALPISLFIKSIGSSAETHFVPGDA
VFLTGNPNIVPHAMLHNIKHNKVLHSRNIMVTVYTEDIPYVAKEQRVQLEKMDEHFYRISMYYGFKDQPNIPQALEQAYQ
ALDLEFDMMQISFFISRDRLIHTVGDGMSPWREKLFISMQRNTSPVSDFYQIPPNRVVEMGSQIEI

Sequences:

>Translated_626_residues
MQSSAKKVALPAMTLAALGVVFGDIGTSPLYAFAQTFTSAHVNISEATVFGILSLIFWCITLSISFKYVSIVMRADNNGE
GGIMSLLALLLRIKQLDSNKKIYLIALGFVGASLFFGDGIITPAISVLSAIEGLSIATPAFDRWLIPIGLGILTALFMVQ
RHGTATMGKFFGPITMLWFISIGALGLYSIIQTPHILWFINPIWAIEFAIHQPFVAFVAMGSVVLTMTGGEALYADMGHF
GRMPIRLAWFIVVCPSLMLNYAGQGALLLRDPQAVSNPFYLLVPEWALFPMIGLATAAAVIASQAVITGVFSMVNQAIQL
RYLPRLTVIHTSDVEQGQIYVPFINWVLYISVFFLIILFESSSNLASAYGVAVTMTMLCVTILISVLAYGAWGWPWWKVT
LFAVPFLALDGIFVASTSLKILSGGWVPFVIGVVVFTILMTWKRGREIVFNRLETDALPISLFIKSIGSSAETHFVPGDA
VFLTGNPNIVPHAMLHNIKHNKVLHSRNIMVTVYTEDIPYVAKEQRVQLEKMDEHFYRISMYYGFKDQPNIPQALEQAYQ
ALDLEFDMMQISFFISRDRLIHTVGDGMSPWREKLFISMQRNTSPVSDFYQIPPNRVVEMGSQIEI
>Mature_626_residues
MQSSAKKVALPAMTLAALGVVFGDIGTSPLYAFAQTFTSAHVNISEATVFGILSLIFWCITLSISFKYVSIVMRADNNGE
GGIMSLLALLLRIKQLDSNKKIYLIALGFVGASLFFGDGIITPAISVLSAIEGLSIATPAFDRWLIPIGLGILTALFMVQ
RHGTATMGKFFGPITMLWFISIGALGLYSIIQTPHILWFINPIWAIEFAIHQPFVAFVAMGSVVLTMTGGEALYADMGHF
GRMPIRLAWFIVVCPSLMLNYAGQGALLLRDPQAVSNPFYLLVPEWALFPMIGLATAAAVIASQAVITGVFSMVNQAIQL
RYLPRLTVIHTSDVEQGQIYVPFINWVLYISVFFLIILFESSSNLASAYGVAVTMTMLCVTILISVLAYGAWGWPWWKVT
LFAVPFLALDGIFVASTSLKILSGGWVPFVIGVVVFTILMTWKRGREIVFNRLETDALPISLFIKSIGSSAETHFVPGDA
VFLTGNPNIVPHAMLHNIKHNKVLHSRNIMVTVYTEDIPYVAKEQRVQLEKMDEHFYRISMYYGFKDQPNIPQALEQAYQ
ALDLEFDMMQISFFISRDRLIHTVGDGMSPWREKLFISMQRNTSPVSDFYQIPPNRVVEMGSQIEI

Specific function: Transport of potassium into the cell

COG id: COG3158

COG function: function code P; K+ transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family

Homologues:

Organism=Escherichia coli, GI48994960, Length=632, Percent_Identity=47.7848101265823, Blast_Score=608, Evalue=1e-175,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KUP_ACIAD (Q6F793)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_047894.1
- STRING:   Q6F793
- GeneID:   2880727
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD3412
- NMPDR:   fig|62977.3.peg.3087
- eggNOG:   COG3158
- HOGENOM:   HBG351154
- OMA:   FILMTTW
- PhylomeDB:   Q6F793
- ProtClustDB:   CLSK707872
- BioCyc:   ASP62977:ACIAD3412-MONOMER
- HAMAP:   MF_01522
- InterPro:   IPR003855
- InterPro:   IPR023051

Pfam domain/function: PF02705 K_trans

EC number: NA

Molecular weight: Translated: 69411; Mature: 69411

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1b121ca0)-; HASH(0x1b0ff554)-; HASH(0x19966118)-; HASH(0x1b0ff2a8)-; HASH(0x19b8afe8)-; HASH(0x1b5c1b7c)-; HASH(0x1b504a8c)-; HASH(0x1a81ba4c)-; HASH(0x1aeee1d8)-; HASH(0x1ae7dc88)-; HASH(0x1aa9390c)-; HASH(0x1ad70580)-; HASH(0x1b4b82d4)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSAKKVALPAMTLAALGVVFGDIGTSPLYAFAQTFTSAHVNISEATVFGILSLIFWCI
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHH
TLSISFKYVSIVMRADNNGEGGIMSLLALLLRIKQLDSNKKIYLIALGFVGASLFFGDGI
HHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHCCCH
ITPAISVLSAIEGLSIATPAFDRWLIPIGLGILTALFMVQRHGTATMGKFFGPITMLWFI
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SIGALGLYSIIQTPHILWFINPIWAIEFAIHQPFVAFVAMGSVVLTMTGGEALYADMGHF
HHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEHHHHHCC
GRMPIRLAWFIVVCPSLMLNYAGQGALLLRDPQAVSNPFYLLVPEWALFPMIGLATAAAV
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCEEEEECCHHHHHHHHHHHHHHH
IASQAVITGVFSMVNQAIQLRYLPRLTVIHTSDVEQGQIYVPFINWVLYISVFFLIILFE
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCC
SSSNLASAYGVAVTMTMLCVTILISVLAYGAWGWPWWKVTLFAVPFLALDGIFVASTSLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCEE
ILSGGWVPFVIGVVVFTILMTWKRGREIVFNRLETDALPISLFIKSIGSSAETHFVPGDA
EEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCCCE
VFLTGNPNIVPHAMLHNIKHNKVLHSRNIMVTVYTEDIPYVAKEQRVQLEKMDEHFYRIS
EEECCCCCCCHHHHHHCCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEE
MYYGFKDQPNIPQALEQAYQALDLEFDMMQISFFISRDRLIHTVGDGMSPWREKLFISMQ
EEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHEEEEEC
RNTSPVSDFYQIPPNRVVEMGSQIEI
CCCCCCHHHHHCCCHHHHHCCCCCCH
>Mature Secondary Structure
MQSSAKKVALPAMTLAALGVVFGDIGTSPLYAFAQTFTSAHVNISEATVFGILSLIFWCI
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHH
TLSISFKYVSIVMRADNNGEGGIMSLLALLLRIKQLDSNKKIYLIALGFVGASLFFGDGI
HHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHCCCH
ITPAISVLSAIEGLSIATPAFDRWLIPIGLGILTALFMVQRHGTATMGKFFGPITMLWFI
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SIGALGLYSIIQTPHILWFINPIWAIEFAIHQPFVAFVAMGSVVLTMTGGEALYADMGHF
HHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEHHHHHCC
GRMPIRLAWFIVVCPSLMLNYAGQGALLLRDPQAVSNPFYLLVPEWALFPMIGLATAAAV
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCEEEEECCHHHHHHHHHHHHHHH
IASQAVITGVFSMVNQAIQLRYLPRLTVIHTSDVEQGQIYVPFINWVLYISVFFLIILFE
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCC
SSSNLASAYGVAVTMTMLCVTILISVLAYGAWGWPWWKVTLFAVPFLALDGIFVASTSLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCEE
ILSGGWVPFVIGVVVFTILMTWKRGREIVFNRLETDALPISLFIKSIGSSAETHFVPGDA
EEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCCCE
VFLTGNPNIVPHAMLHNIKHNKVLHSRNIMVTVYTEDIPYVAKEQRVQLEKMDEHFYRIS
EEECCCCCCCHHHHHHCCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEE
MYYGFKDQPNIPQALEQAYQALDLEFDMMQISFFISRDRLIHTVGDGMSPWREKLFISMQ
EEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHEEEEEC
RNTSPVSDFYQIPPNRVVEMGSQIEI
CCCCCCHHHHHCCCHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA