| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is 50086314
Identifier: 50086314
GI number: 50086314
Start: 3234267
End: 3235172
Strand: Reverse
Name: 50086314
Synonym: ACIAD3333
Alternate gene names: NA
Gene position: 3235172-3234267 (Counterclockwise)
Preceding gene: 50086315
Following gene: 50086306
Centisome position: 89.9
GC content: 36.75
Gene sequence:
>906_bases TTGGGCTGTAAAAGTGTATATGCCGATTCTTGCTGGATCTCATCACCTACATTAAATTTTGGCTCTGTCAACACGCAACA AGTGTCATCCAAAACTGATCTGGATGTAACGTGTAATCAATATAACAATGTCAAAACCTCATTCAACTTATGTTTTTATA TTGAAGATAATTCTCCTTTAGGGATCAATCCAAGACGCCTCATTTCATTATCATGGCCATTTGATTATTTAAATTATGAT CTATATTACGATCCGTCTTTTTCTCGAATGATTGATAATAAAGCTGCGCCTAATAACTTGCTCTGTAAGTCGCTACAGAT AGAAAATAACGGCCAGCAGACAGTCCAAATCCCGATTTATGGCAAGGTATATGCCAATCAGAATGTTAAGGCTGATAATT ATCAAAGTTATAACATGACAGTTAAGTTGCTTTATAAAAGCAAAACAGGTGATGTCGTACCTTCTGTTGAGGAAACATTA GCGCAACAGAATATGGTGCAAAACTATATGAAAACAACCACAAAATTTGAAAATAGCTGTGCAGTGGTTGGCGTAAACAC ACTGGATTTTGGAAGTATTATAAGTTTGAATCAACCCATATATGGGCAAACCAGTATTCAGTTGAAATGTCCTACCAATA CTGCTTTAAAGGTGGGTTTGGATACAGGGTTATATGCCAGTGGTACTCAACGGCGTATGACCAATGCAGGGCAATTTATT CAATATGATTTATATCAAGATAGTGCATATAGTATAGCTTGGGGAACTTCTGACAATTCTGTACTCAAGTTGGATACCTA CCAGCCTGTGTTTACCATTCCTGTATATGGACGAATTCTGCCACAAAATCAAAATCTAAAAGCTGGGGAATACCGCGATA CCATTACTATTAAGCTGACTTATTAG
Upstream 100 bases:
>100_bases TGGGGAAAGTCACATGTCAATAATTCACAGCAATTGTATAATCGCTCAGATTTCCAAAAATGCATATTTATTTAGGAGCC TTGTTGTTGTGCTGCTTTGT
Downstream 100 bases:
>100_bases TACGTTACAATGGCGGTTACGGTATCAAGATATTGACCCGCGGGTACGGCAGTATCCTGAGCATCAACTTTACCCCAGAT CTTGATCATTTGGGTTTCGC
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MGCKSVYADSCWISSPTLNFGSVNTQQVSSKTDLDVTCNQYNNVKTSFNLCFYIEDNSPLGINPRRLISLSWPFDYLNYD LYYDPSFSRMIDNKAAPNNLLCKSLQIENNGQQTVQIPIYGKVYANQNVKADNYQSYNMTVKLLYKSKTGDVVPSVEETL AQQNMVQNYMKTTTKFENSCAVVGVNTLDFGSIISLNQPIYGQTSIQLKCPTNTALKVGLDTGLYASGTQRRMTNAGQFI QYDLYQDSAYSIAWGTSDNSVLKLDTYQPVFTIPVYGRILPQNQNLKAGEYRDTITIKLTY
Sequences:
>Translated_301_residues MGCKSVYADSCWISSPTLNFGSVNTQQVSSKTDLDVTCNQYNNVKTSFNLCFYIEDNSPLGINPRRLISLSWPFDYLNYD LYYDPSFSRMIDNKAAPNNLLCKSLQIENNGQQTVQIPIYGKVYANQNVKADNYQSYNMTVKLLYKSKTGDVVPSVEETL AQQNMVQNYMKTTTKFENSCAVVGVNTLDFGSIISLNQPIYGQTSIQLKCPTNTALKVGLDTGLYASGTQRRMTNAGQFI QYDLYQDSAYSIAWGTSDNSVLKLDTYQPVFTIPVYGRILPQNQNLKAGEYRDTITIKLTY >Mature_300_residues GCKSVYADSCWISSPTLNFGSVNTQQVSSKTDLDVTCNQYNNVKTSFNLCFYIEDNSPLGINPRRLISLSWPFDYLNYDL YYDPSFSRMIDNKAAPNNLLCKSLQIENNGQQTVQIPIYGKVYANQNVKADNYQSYNMTVKLLYKSKTGDVVPSVEETLA QQNMVQNYMKTTTKFENSCAVVGVNTLDFGSIISLNQPIYGQTSIQLKCPTNTALKVGLDTGLYASGTQRRMTNAGQFIQ YDLYQDSAYSIAWGTSDNSVLKLDTYQPVFTIPVYGRILPQNQNLKAGEYRDTITIKLTY
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33870; Mature: 33739
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCKSVYADSCWISSPTLNFGSVNTQQVSSKTDLDVTCNQYNNVKTSFNLCFYIEDNSPL CCCCCEECCCEEECCCCCCCCCCCHHHCCCCCCCEEEECCCCCEEEEEEEEEEEECCCCC GINPRRLISLSWPFDYLNYDLYYDPSFSRMIDNKAAPNNLLCKSLQIENNGQQTVQIPIY CCCCCEEEEEECCHHHHCEEEEECCCHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEEE GKVYANQNVKADNYQSYNMTVKLLYKSKTGDVVPSVEETLAQQNMVQNYMKTTTKFENSC EEEEECCCCCCCCEEEECEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE AVVGVNTLDFGSIISLNQPIYGQTSIQLKCPTNTALKVGLDTGLYASGTQRRMTNAGQFI EEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCEEEEECCCCEECCCCHHHHCCCCCEE QYDLYQDSAYSIAWGTSDNSVLKLDTYQPVFTIPVYGRILPQNQNLKAGEYRDTITIKLT EEEEECCCEEEEEECCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEE Y C >Mature Secondary Structure GCKSVYADSCWISSPTLNFGSVNTQQVSSKTDLDVTCNQYNNVKTSFNLCFYIEDNSPL CCCCEECCCEEECCCCCCCCCCCHHHCCCCCCCEEEECCCCCEEEEEEEEEEEECCCCC GINPRRLISLSWPFDYLNYDLYYDPSFSRMIDNKAAPNNLLCKSLQIENNGQQTVQIPIY CCCCCEEEEEECCHHHHCEEEEECCCHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEEE GKVYANQNVKADNYQSYNMTVKLLYKSKTGDVVPSVEETLAQQNMVQNYMKTTTKFENSC EEEEECCCCCCCCEEEECEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCE AVVGVNTLDFGSIISLNQPIYGQTSIQLKCPTNTALKVGLDTGLYASGTQRRMTNAGQFI EEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCEEEEECCCCEECCCCHHHHCCCCCEE QYDLYQDSAYSIAWGTSDNSVLKLDTYQPVFTIPVYGRILPQNQNLKAGEYRDTITIKLT EEEEECCCEEEEEECCCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEE Y C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA