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The map label for this gene is comF [C]

Identifier: 50086299

GI number: 50086299

Start: 3219335

End: 3219769

Strand: Reverse

Name: comF [C]

Synonym: ACIAD3314

Alternate gene names: 50086299

Gene position: 3219769-3219335 (Counterclockwise)

Preceding gene: 50086300

Following gene: 50086298

Centisome position: 89.47

GC content: 40.92

Gene sequence:

>435_bases
ATGAGAGTAAGACATGGCTTTACATTGATTGAACTCATGATTGTAGTTGCTATTATTGGAATTTTAGCAGCAATTGCTTA
TCCCTCTTATCAAAACTATAAAATTAGAGTGAATCGTAGCGATGTACAGTCTGAGCTGATTCGGGTTTCACAGCAATTGC
AAAGTTATAAAATGGTGAATCATGGTTATGCCAATGCTTCACTTGCTGGACTTGGCAATGCAGCCAGTTATCCTGTAACT
GGCACAGCATTTTACACACTAAATTTGGCGGTAGATTCAGATAATCAGGGATATGTACTCACAGCAACACCTATATCGAG
CACAATGCAAGCTGGTAATGGCATTATCTGTCTGAATCAGGATGGGCAAAAATTTTGGAGCAAAGCCGCAACGGCATGTA
GCCTGAGTAGCAACTCGACTTGGGATGGGCGTTAA

Upstream 100 bases:

>100_bases
ATTATTCATTATTGCTCACAAATACAGGATTTAGCTGTAAAAATAAAACATGGGCTAATATTAGTTCAAGCTCCTGTGGT
ACAGGCTCGGAGAGTTGGTA

Downstream 100 bases:

>100_bases
ATGCAAATTCAAAACTGTGGATAAGCCAAAATTTAATCTTTCATTCACTTTAAATTTGACGTAGAATATCGCCCTCTATG
AAAGGGGTTTGAAGTGTTGC

Product: pilin like competence factor

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein PilE; Competence Protein ComF

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MRVRHGFTLIELMIVVAIIGILAAIAYPSYQNYKIRVNRSDVQSELIRVSQQLQSYKMVNHGYANASLAGLGNAASYPVT
GTAFYTLNLAVDSDNQGYVLTATPISSTMQAGNGIICLNQDGQKFWSKAATACSLSSNSTWDGR

Sequences:

>Translated_144_residues
MRVRHGFTLIELMIVVAIIGILAAIAYPSYQNYKIRVNRSDVQSELIRVSQQLQSYKMVNHGYANASLAGLGNAASYPVT
GTAFYTLNLAVDSDNQGYVLTATPISSTMQAGNGIICLNQDGQKFWSKAATACSLSSNSTWDGR
>Mature_144_residues
MRVRHGFTLIELMIVVAIIGILAAIAYPSYQNYKIRVNRSDVQSELIRVSQQLQSYKMVNHGYANASLAGLGNAASYPVT
GTAFYTLNLAVDSDNQGYVLTATPISSTMQAGNGIICLNQDGQKFWSKAATACSLSSNSTWDGR

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15587; Mature: 15587

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVRHGFTLIELMIVVAIIGILAAIAYPSYQNYKIRVNRSDVQSELIRVSQQLQSYKMVN
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
HGYANASLAGLGNAASYPVTGTAFYTLNLAVDSDNQGYVLTATPISSTMQAGNGIICLNQ
CCCCCCEEECCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCHHHHHCCCCEEEECC
DGQKFWSKAATACSLSSNSTWDGR
CHHHHHHHHHHEEECCCCCCCCCC
>Mature Secondary Structure
MRVRHGFTLIELMIVVAIIGILAAIAYPSYQNYKIRVNRSDVQSELIRVSQQLQSYKMVN
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH
HGYANASLAGLGNAASYPVTGTAFYTLNLAVDSDNQGYVLTATPISSTMQAGNGIICLNQ
CCCCCCEEECCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCHHHHHCCCCEEEECC
DGQKFWSKAATACSLSSNSTWDGR
CHHHHHHHHHHEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA