Click here to switch to the map view.

The map label for this gene is comE [C]

Identifier: 50086300

GI number: 50086300

Start: 3219769

End: 3220278

Strand: Reverse

Name: comE [C]

Synonym: ACIAD3315

Alternate gene names: 50086300

Gene position: 3220278-3219769 (Counterclockwise)

Preceding gene: 50086301

Following gene: 50086299

Centisome position: 89.49

GC content: 36.86

Gene sequence:

>510_bases
ATGCAGCATCACAGACAGGGTTTTACGCTGATTGAATTGATGGTCGTAGTTGTGATTATTGCAATTTTTGCTGCCATTGC
GATTCCTAGCTATCAGGAATATATACGTCGTTCAAATCTAGCAATGGCTCAACAGGAAATGCAAAAACTAGCAGAACAGC
TTGAGCGTTATCGCTCTAGAAATTTTTCCTATAAAGGGTTTGATGCAACGTATTTATATCAAGATAAAAGTGGTCAAACC
CTTGCAAAATTTGATAGTACAAAACAGATTGTACAGCTACCATTAGATACATCAAATACAAAGTATACTTTGGCTGTTGT
AGATACAACAACCAATAATCCGTTACTAACTTCAGCAAATGCTATTGGACAGGGCTGGGCGATTAAGGCAATGAGTGCAG
ATAATAATAATTATTCATTATTGCTCACAAATACAGGATTTAGCTGTAAAAATAAAACATGGGCTAATATTAGTTCAAGC
TCCTGTGGTACAGGCTCGGAGAGTTGGTAA

Upstream 100 bases:

>100_bases
ATCGTACCATTAAAATGGTATGAGCAAAGCACCCCTTAATCTGAAAATCGCCATACTGAATGATGATTTGGTATGGCGTT
AATGCTCAATGGAGAACATA

Downstream 100 bases:

>100_bases
TGAGAGTAAGACATGGCTTTACATTGATTGAACTCATGATTGTAGTTGCTATTATTGGAATTTTAGCAGCAATTGCTTAT
CCCTCTTATCAAAACTATAA

Product: pilin like competence factor

Products: NA

Alternate protein names: Pilin Protein PilE; ComE Protein

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MQHHRQGFTLIELMVVVVIIAIFAAIAIPSYQEYIRRSNLAMAQQEMQKLAEQLERYRSRNFSYKGFDATYLYQDKSGQT
LAKFDSTKQIVQLPLDTSNTKYTLAVVDTTTNNPLLTSANAIGQGWAIKAMSADNNNYSLLLTNTGFSCKNKTWANISSS
SCGTGSESW

Sequences:

>Translated_169_residues
MQHHRQGFTLIELMVVVVIIAIFAAIAIPSYQEYIRRSNLAMAQQEMQKLAEQLERYRSRNFSYKGFDATYLYQDKSGQT
LAKFDSTKQIVQLPLDTSNTKYTLAVVDTTTNNPLLTSANAIGQGWAIKAMSADNNNYSLLLTNTGFSCKNKTWANISSS
SCGTGSESW
>Mature_169_residues
MQHHRQGFTLIELMVVVVIIAIFAAIAIPSYQEYIRRSNLAMAQQEMQKLAEQLERYRSRNFSYKGFDATYLYQDKSGQT
LAKFDSTKQIVQLPLDTSNTKYTLAVVDTTTNNPLLTSANAIGQGWAIKAMSADNNNYSLLLTNTGFSCKNKTWANISSS
SCGTGSESW

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18883; Mature: 18883

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHHRQGFTLIELMVVVVIIAIFAAIAIPSYQEYIRRSNLAMAQQEMQKLAEQLERYRSR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NFSYKGFDATYLYQDKSGQTLAKFDSTKQIVQLPLDTSNTKYTLAVVDTTTNNPLLTSAN
CCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCCEEECCC
AIGQGWAIKAMSADNNNYSLLLTNTGFSCKNKTWANISSSSCGTGSESW
CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQHHRQGFTLIELMVVVVIIAIFAAIAIPSYQEYIRRSNLAMAQQEMQKLAEQLERYRSR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NFSYKGFDATYLYQDKSGQTLAKFDSTKQIVQLPLDTSNTKYTLAVVDTTTNNPLLTSAN
CCCCCCCCEEEEEECCCCCCHHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCCEEECCC
AIGQGWAIKAMSADNNNYSLLLTNTGFSCKNKTWANISSSSCGTGSESW
CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA