Click here to switch to the map view.

The map label for this gene is wrbA [H]

Identifier: 50086168

GI number: 50086168

Start: 3095051

End: 3095650

Strand: Reverse

Name: wrbA [H]

Synonym: ACIAD3167

Alternate gene names: 50086168

Gene position: 3095650-3095051 (Counterclockwise)

Preceding gene: 50086170

Following gene: 50086167

Centisome position: 86.02

GC content: 43.83

Gene sequence:

>600_bases
ATGATGCAACCTTATATTTTAGTCCTTTATTACAGCAAATATGGCTCTACACAAAAAATGGCACATTTGATTGCCAATGG
TATCGAGTCTGAAGGAATGAATGTCAGAATCAGAACCGTTCCCAATCTGACAACAGCCATATCGACAATTGAACCCGCAA
TTCCAGAAACTGGTGATTTATACTGTAGCTTGGATGATTTGGCAAACTGTGCTGGGCTGGCAATGGGATCACCGACACGC
TTTGGCAATATGTCCAGTGAAATGAAATACTTTTGGGATCAGACCACCAGTCTTTGGTTAAATGGGGCACTTCACGATAA
GCCTGCTTGTGTTTTTACCACATCAGGTTCTATGCATGGGGGGCAGGAGAGCACATTGCTGACCATGCTTCCGCCGTTAT
TCCATCATGGCATGATGATCTTAGGCTTACCTAATTCTATTCCTGCTTTATCAAATACCAAAACGGGTGGAACGCCTTAC
GGGGCCAGTCATGTGAGCGGTCCTCGACATGATCAGGACTTAAGCCATGATGAAAAACTGCTATGCGAGGCTATGGGAAA
ACGTCTGGCAAAAATGGTCAGAAAATTATCTTCGCTATAA

Upstream 100 bases:

>100_bases
CAATTTTATAATCTTGATGTTTATTTCGTTTCAATATGAAAGCTTAGCCAAAAACCAGCACAAATATCGTATAGTTTTCT
TTTTAACAAATTTTTAAAAA

Downstream 100 bases:

>100_bases
CATCGAATATCTATGTAACGGTTGTTGCTTATAAAAAATAGAACATAGGCTTCTTTGAGTGGCAGCCTATGTCTGGACGT
TTTATGAATTATTTCGAATT

Product: tryptophan repressor binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MMQPYILVLYYSKYGSTQKMAHLIANGIESEGMNVRIRTVPNLTTAISTIEPAIPETGDLYCSLDDLANCAGLAMGSPTR
FGNMSSEMKYFWDQTTSLWLNGALHDKPACVFTTSGSMHGGQESTLLTMLPPLFHHGMMILGLPNSIPALSNTKTGGTPY
GASHVSGPRHDQDLSHDEKLLCEAMGKRLAKMVRKLSSL

Sequences:

>Translated_199_residues
MMQPYILVLYYSKYGSTQKMAHLIANGIESEGMNVRIRTVPNLTTAISTIEPAIPETGDLYCSLDDLANCAGLAMGSPTR
FGNMSSEMKYFWDQTTSLWLNGALHDKPACVFTTSGSMHGGQESTLLTMLPPLFHHGMMILGLPNSIPALSNTKTGGTPY
GASHVSGPRHDQDLSHDEKLLCEAMGKRLAKMVRKLSSL
>Mature_199_residues
MMQPYILVLYYSKYGSTQKMAHLIANGIESEGMNVRIRTVPNLTTAISTIEPAIPETGDLYCSLDDLANCAGLAMGSPTR
FGNMSSEMKYFWDQTTSLWLNGALHDKPACVFTTSGSMHGGQESTLLTMLPPLFHHGMMILGLPNSIPALSNTKTGGTPY
GASHVSGPRHDQDLSHDEKLLCEAMGKRLAKMVRKLSSL

Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787239, Length=196, Percent_Identity=36.734693877551, Blast_Score=116, Evalue=9e-28,
Organism=Saccharomyces cerevisiae, GI6319849, Length=197, Percent_Identity=32.994923857868, Blast_Score=103, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6320235, Length=198, Percent_Identity=32.3232323232323, Blast_Score=99, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6319526, Length=209, Percent_Identity=28.2296650717703, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR010089
- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 21652; Mature: 21652

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQPYILVLYYSKYGSTQKMAHLIANGIESEGMNVRIRTVPNLTTAISTIEPAIPETGDL
CCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCE
YCSLDDLANCAGLAMGSPTRFGNMSSEMKYFWDQTTSLWLNGALHDKPACVFTTSGSMHG
EECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHEEECCCCCCCCCEEEEECCCCCC
GQESTLLTMLPPLFHHGMMILGLPNSIPALSNTKTGGTPYGASHVSGPRHDQDLSHDEKL
CCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LCEAMGKRLAKMVRKLSSL
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMQPYILVLYYSKYGSTQKMAHLIANGIESEGMNVRIRTVPNLTTAISTIEPAIPETGDL
CCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCE
YCSLDDLANCAGLAMGSPTRFGNMSSEMKYFWDQTTSLWLNGALHDKPACVFTTSGSMHG
EECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHEEECCCCCCCCCEEEEECCCCCC
GQESTLLTMLPPLFHHGMMILGLPNSIPALSNTKTGGTPYGASHVSGPRHDQDLSHDEKL
CCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LCEAMGKRLAKMVRKLSSL
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA