| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is fadJ [H]
Identifier: 50086010
GI number: 50086010
Start: 2920243
End: 2922378
Strand: Direct
Name: fadJ [H]
Synonym: ACIAD2989
Alternate gene names: 50086010
Gene position: 2920243-2922378 (Clockwise)
Preceding gene: 50086009
Following gene: 50086011
Centisome position: 81.15
GC content: 43.68
Gene sequence:
>2136_bases ATGAGCGCTATTAAATACGAAAAAAACGCTGACAATATTGTAATTCTTACCCTTGATTCATCGGGTCAATCTGCAAATAC CATGAATGCAGAATTTCGTGATGCTTTAAATGATGTCAGTCAAAAGCTCAAAGCTGAAACTGACTTGAAAGGGATTATTT TCCGTTCAGCCAAAAAAACCTTCTTTGCTGGTGGCGACTTAGATGAGCTGATTCAGGTTCAACCTGAACATGCCACTGAG TTTTTTAAAATGATTGAAAAGCTCAAAGCAGATTTGCGAACAATCGAGACTCTAGGTGTACCTGTGGTCGCGGCTTTAAA TGGCACAGCACTTGGTGGCGGTTGGGAGTTAGCACTCGGCTGTCATTATCGTATTGCCATCAATGATCCTAAAAGCAAAT TTGGTTTACCAGAAGTCACTTTAGGTCTACTTCCAGGTGGGGGTGGTATCGTCCGTATGGTACGTCTACTCGGTTTGCAA AATGCTTTTCCATTCTTAATGGAAGGTAAACAATTTGGTGTTGACCAAGCAAAATCTCTGGGATTAGTCCATGACACGGC TGAGAATCAACAAGAACTGTTAGATAAAGCAATTGTTTGGGTCAAAGCCAATCCGAAAAGTCAGCAGCCCTTCGATGTCA AAGGCTACAAAATTCCTGGTGGTGATCCTAAAACACCTGCTGTTGCACAAGTGCTTGCGATTGCCCCTGCCATGCTACGC GATAAAACCAAAGGCTGTTATCCTGCACCTGAAGCGATTATGGCAGCAGCGGTTGAAGGTGCTCAAGTGGATGTCGATAC CGCGTTACGTATTGAATCCCGTTACTTTACTCAATTGGCTATCGGTCAAATTGCGAAAAATATGATTGGTACATTCTGGC ATGGTCTAAATGCGATCAAGTCAGGTGCAAGCCGCCCTGCCGATGTTGCTAGATGGCAAGCCACTAAAGTCGGTGTATTG GGCGCAGGTATGATGGGTGCAGGTATTGCCTACTCAACCGCGATCAAAGGTATTCCTGTCATACTCAAAGATGTATCTGT AGAAAATGCAGAGAAAGGCAAAGCCTATTCGCAAAAGCTACTTGATAAACGTGTTTCACAAGGACGTATGACGGCGGAAA AACGTAATCAAGTCTTAGCGCTCATTACTGCTACCGCTGATGCAGCTGATTTACAAGGCTGTGATCTGATCATTGAAGCT GTATTTGAGAATCAAGAACTCAAAGCCAAGGTGACGCAAGAAGCTGAACAGTATTTAGCTGAAGGTGGCATTTTTGCATC AAATACCTCCACACTCCCCATCACAGGATTAGCAACGGCAAGTAAAGATGCCAAGAACTTTATTGGGCTACATTTCTTTA GCCCTGTCGATAAAATGCAATTGGTAGAAATCATTAAAGGCAAACAAACTTCTGCCGAAACATTGGCTAAAGCCTATGAC TTTGTCCAACAAATTGCGAAAACCCCCATCGTGGTGAATGACAGTCGGGGCTTCTTTACCAGTCGCGTTTTTGGAACATT TATTCAAGAAGGTATGCGCTTACTGGCTGAAGGTGTACACCCAGCAAAAATTGAAATGGCAGCACTCAAAGCGGGTATGC CTGTGGGGCCACTTGCGATTCAGGATGAAGTCTCTTTAACTTTAACTGAACATGTTGCAAGCGAAACGCGCAAAGCACTG CAAGCTGAAGCTAAAGACTTAGCGAAAACTCCTGTTGATGAAGTGGTTCACACCATGATTCACGAGCTCAATCGCAAAGG TAAAGCTGCTGGTGCAGGTTTTTATGAGTATCCAGAGCATGGCAAAAAGCACTTATGGCAAGGTCTTGACCGCTGGCAAA AAGATCATGATATTTCCGAACAGGAGATGATTGACCGCTTCTTGTTTGTTCAGGCACTGGACACTTTACGCTGCTATGAA GAAGGTGTACTTGAGTCTGTGATTGATGCCAATGTCGGTTCGATTTTTGGCATTGGTTTTGCCCCATGGACAGGGGGTGC TATTCAGTTCTTAAATCAAAACGGAATTGAGAGGTCACTGCAACGTTCAGAGGAATTGGCTCAAAAATATGGTGAACGTT TTAATCCACCACCGTATCTCAAAGAGAAAGCTCAGCAAAAACAAATCATTCAATAA
Upstream 100 bases:
>100_bases GAATTAGAACGTCAGGGTAAAAAACGGGGCTTAGCCACTTTATGTGTAGGCGGTGGTATGGGTATCGCGACGATCATTGA ACGAGTGTAAGGAGAATCTC
Downstream 100 bases:
>100_bases TTGTTATTTTCTATCACTCACTCCTGCCCTAGATTTAGGCAGGAGTTGCATCTATTTGAATCATCTTGATTTTAATTTTT AAAATTTTCTCTCGTTATTT
Product: 3-hydroxybutyryl-CoA epimerase
Products: NA
Alternate protein names: Enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase [H]
Number of amino acids: Translated: 711; Mature: 710
Protein sequence:
>711_residues MSAIKYEKNADNIVILTLDSSGQSANTMNAEFRDALNDVSQKLKAETDLKGIIFRSAKKTFFAGGDLDELIQVQPEHATE FFKMIEKLKADLRTIETLGVPVVAALNGTALGGGWELALGCHYRIAINDPKSKFGLPEVTLGLLPGGGGIVRMVRLLGLQ NAFPFLMEGKQFGVDQAKSLGLVHDTAENQQELLDKAIVWVKANPKSQQPFDVKGYKIPGGDPKTPAVAQVLAIAPAMLR DKTKGCYPAPEAIMAAAVEGAQVDVDTALRIESRYFTQLAIGQIAKNMIGTFWHGLNAIKSGASRPADVARWQATKVGVL GAGMMGAGIAYSTAIKGIPVILKDVSVENAEKGKAYSQKLLDKRVSQGRMTAEKRNQVLALITATADAADLQGCDLIIEA VFENQELKAKVTQEAEQYLAEGGIFASNTSTLPITGLATASKDAKNFIGLHFFSPVDKMQLVEIIKGKQTSAETLAKAYD FVQQIAKTPIVVNDSRGFFTSRVFGTFIQEGMRLLAEGVHPAKIEMAALKAGMPVGPLAIQDEVSLTLTEHVASETRKAL QAEAKDLAKTPVDEVVHTMIHELNRKGKAAGAGFYEYPEHGKKHLWQGLDRWQKDHDISEQEMIDRFLFVQALDTLRCYE EGVLESVIDANVGSIFGIGFAPWTGGAIQFLNQNGIERSLQRSEELAQKYGERFNPPPYLKEKAQQKQIIQ
Sequences:
>Translated_711_residues MSAIKYEKNADNIVILTLDSSGQSANTMNAEFRDALNDVSQKLKAETDLKGIIFRSAKKTFFAGGDLDELIQVQPEHATE FFKMIEKLKADLRTIETLGVPVVAALNGTALGGGWELALGCHYRIAINDPKSKFGLPEVTLGLLPGGGGIVRMVRLLGLQ NAFPFLMEGKQFGVDQAKSLGLVHDTAENQQELLDKAIVWVKANPKSQQPFDVKGYKIPGGDPKTPAVAQVLAIAPAMLR DKTKGCYPAPEAIMAAAVEGAQVDVDTALRIESRYFTQLAIGQIAKNMIGTFWHGLNAIKSGASRPADVARWQATKVGVL GAGMMGAGIAYSTAIKGIPVILKDVSVENAEKGKAYSQKLLDKRVSQGRMTAEKRNQVLALITATADAADLQGCDLIIEA VFENQELKAKVTQEAEQYLAEGGIFASNTSTLPITGLATASKDAKNFIGLHFFSPVDKMQLVEIIKGKQTSAETLAKAYD FVQQIAKTPIVVNDSRGFFTSRVFGTFIQEGMRLLAEGVHPAKIEMAALKAGMPVGPLAIQDEVSLTLTEHVASETRKAL QAEAKDLAKTPVDEVVHTMIHELNRKGKAAGAGFYEYPEHGKKHLWQGLDRWQKDHDISEQEMIDRFLFVQALDTLRCYE EGVLESVIDANVGSIFGIGFAPWTGGAIQFLNQNGIERSLQRSEELAQKYGERFNPPPYLKEKAQQKQIIQ >Mature_710_residues SAIKYEKNADNIVILTLDSSGQSANTMNAEFRDALNDVSQKLKAETDLKGIIFRSAKKTFFAGGDLDELIQVQPEHATEF FKMIEKLKADLRTIETLGVPVVAALNGTALGGGWELALGCHYRIAINDPKSKFGLPEVTLGLLPGGGGIVRMVRLLGLQN AFPFLMEGKQFGVDQAKSLGLVHDTAENQQELLDKAIVWVKANPKSQQPFDVKGYKIPGGDPKTPAVAQVLAIAPAMLRD KTKGCYPAPEAIMAAAVEGAQVDVDTALRIESRYFTQLAIGQIAKNMIGTFWHGLNAIKSGASRPADVARWQATKVGVLG AGMMGAGIAYSTAIKGIPVILKDVSVENAEKGKAYSQKLLDKRVSQGRMTAEKRNQVLALITATADAADLQGCDLIIEAV FENQELKAKVTQEAEQYLAEGGIFASNTSTLPITGLATASKDAKNFIGLHFFSPVDKMQLVEIIKGKQTSAETLAKAYDF VQQIAKTPIVVNDSRGFFTSRVFGTFIQEGMRLLAEGVHPAKIEMAALKAGMPVGPLAIQDEVSLTLTEHVASETRKALQ AEAKDLAKTPVDEVVHTMIHELNRKGKAAGAGFYEYPEHGKKHLWQGLDRWQKDHDISEQEMIDRFLFVQALDTLRCYEE GVLESVIDANVGSIFGIGFAPWTGGAIQFLNQNGIERSLQRSEELAQKYGERFNPPPYLKEKAQQKQIIQ
Specific function: Catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities [H]
COG id: COG1250
COG function: function code I; 3-hydroxyacyl-CoA dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the central section; belongs to the 3-hydroxyacyl- CoA dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI20127408, Length=727, Percent_Identity=31.9119669876204, Blast_Score=338, Evalue=8e-93, Organism=Homo sapiens, GI68989263, Length=709, Percent_Identity=28.9139633286319, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI261878539, Length=624, Percent_Identity=28.8461538461538, Blast_Score=209, Evalue=8e-54, Organism=Homo sapiens, GI296179429, Length=290, Percent_Identity=33.7931034482759, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI296179427, Length=307, Percent_Identity=31.5960912052117, Blast_Score=136, Evalue=7e-32, Organism=Homo sapiens, GI194097323, Length=182, Percent_Identity=29.1208791208791, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI4502327, Length=187, Percent_Identity=32.620320855615, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI213417737, Length=203, Percent_Identity=28.0788177339901, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI157694516, Length=203, Percent_Identity=28.0788177339901, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI115430219, Length=220, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=6e-11, Organism=Escherichia coli, GI1788682, Length=710, Percent_Identity=36.056338028169, Blast_Score=389, Evalue=1e-109, Organism=Escherichia coli, GI1790281, Length=713, Percent_Identity=32.5385694249649, Blast_Score=330, Evalue=2e-91, Organism=Escherichia coli, GI1787661, Length=283, Percent_Identity=31.4487632508834, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1787659, Length=173, Percent_Identity=31.2138728323699, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI221142681, Length=187, Percent_Identity=31.0160427807487, Blast_Score=76, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17508953, Length=739, Percent_Identity=33.9648173207037, Blast_Score=326, Evalue=2e-89, Organism=Caenorhabditis elegans, GI17508951, Length=741, Percent_Identity=34.0080971659919, Blast_Score=326, Evalue=3e-89, Organism=Caenorhabditis elegans, GI17558304, Length=741, Percent_Identity=30.9041835357625, Blast_Score=322, Evalue=3e-88, Organism=Caenorhabditis elegans, GI25144276, Length=624, Percent_Identity=35.0961538461538, Blast_Score=285, Evalue=6e-77, Organism=Caenorhabditis elegans, GI71985930, Length=380, Percent_Identity=26.3157894736842, Blast_Score=160, Evalue=3e-39, Organism=Caenorhabditis elegans, GI71985923, Length=385, Percent_Identity=27.2727272727273, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17553560, Length=304, Percent_Identity=32.2368421052632, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17549919, Length=289, Percent_Identity=30.1038062283737, Blast_Score=123, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17563036, Length=295, Percent_Identity=28.8135593220339, Blast_Score=112, Evalue=7e-25, Organism=Caenorhabditis elegans, GI17540714, Length=270, Percent_Identity=27.037037037037, Blast_Score=91, Evalue=3e-18, Organism=Caenorhabditis elegans, GI25145438, Length=212, Percent_Identity=32.5471698113208, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17554946, Length=182, Percent_Identity=30.7692307692308, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560910, Length=178, Percent_Identity=27.5280898876405, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI19921000, Length=743, Percent_Identity=31.7631224764468, Blast_Score=316, Evalue=4e-86, Organism=Drosophila melanogaster, GI24583077, Length=743, Percent_Identity=31.7631224764468, Blast_Score=316, Evalue=4e-86, Organism=Drosophila melanogaster, GI24583079, Length=743, Percent_Identity=31.7631224764468, Blast_Score=316, Evalue=4e-86, Organism=Drosophila melanogaster, GI24653139, Length=173, Percent_Identity=38.150289017341, Blast_Score=103, Evalue=6e-22, Organism=Drosophila melanogaster, GI20129971, Length=188, Percent_Identity=29.7872340425532, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24653477, Length=188, Percent_Identity=29.7872340425532, Blast_Score=88, Evalue=2e-17, Organism=Drosophila melanogaster, GI24583165, Length=199, Percent_Identity=28.1407035175879, Blast_Score=74, Evalue=5e-13, Organism=Drosophila melanogaster, GI45549573, Length=210, Percent_Identity=26.1904761904762, Blast_Score=70, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006180 - InterPro: IPR006176 - InterPro: IPR006108 - InterPro: IPR008927 - InterPro: IPR001753 - InterPro: IPR013328 - InterPro: IPR012802 - InterPro: IPR016040 [H]
Pfam domain/function: PF00725 3HCDH; PF02737 3HCDH_N; PF00378 ECH [H]
EC number: =4.2.1.17; =5.1.2.3; =1.1.1.35 [H]
Molecular weight: Translated: 77355; Mature: 77224
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIKYEKNADNIVILTLDSSGQSANTMNAEFRDALNDVSQKLKAETDLKGIIFRSAKKT CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHH FFAGGDLDELIQVQPEHATEFFKMIEKLKADLRTIETLGVPVVAALNGTALGGGWELALG EECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCEEEEEE CHYRIAINDPKSKFGLPEVTLGLLPGGGGIVRMVRLLGLQNAFPFLMEGKQFGVDQAKSL EEEEEEECCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHC GLVHDTAENQQELLDKAIVWVKANPKSQQPFDVKGYKIPGGDPKTPAVAQVLAIAPAMLR CCHHCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHH DKTKGCYPAPEAIMAAAVEGAQVDVDTALRIESRYFTQLAIGQIAKNMIGTFWHGLNAIK HCCCCCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGASRPADVARWQATKVGVLGAGMMGAGIAYSTAIKGIPVILKDVSVENAEKGKAYSQKL CCCCCCCHHHHHHHHHCCEEECCHHHCCHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHH LDKRVSQGRMTAEKRNQVLALITATADAADLQGCDLIIEAVFENQELKAKVTQEAEQYLA HHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH EGGIFASNTSTLPITGLATASKDAKNFIGLHFFSPVDKMQLVEIIKGKQTSAETLAKAYD CCCEEECCCCCCEEEECCCCCCCHHHHHEEHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH FVQQIAKTPIVVNDSRGFFTSRVFGTFIQEGMRLLAEGVHPAKIEMAALKAGMPVGPLAI HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEE QDEVSLTLTEHVASETRKALQAEAKDLAKTPVDEVVHTMIHELNRKGKAAGAGFYEYPEH CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH GKKHLWQGLDRWQKDHDISEQEMIDRFLFVQALDTLRCYEEGVLESVIDANVGSIFGIGF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC APWTGGAIQFLNQNGIERSLQRSEELAQKYGERFNPPPYLKEKAQQKQIIQ CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SAIKYEKNADNIVILTLDSSGQSANTMNAEFRDALNDVSQKLKAETDLKGIIFRSAKKT CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHH FFAGGDLDELIQVQPEHATEFFKMIEKLKADLRTIETLGVPVVAALNGTALGGGWELALG EECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECCCEEEEEE CHYRIAINDPKSKFGLPEVTLGLLPGGGGIVRMVRLLGLQNAFPFLMEGKQFGVDQAKSL EEEEEEECCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHC GLVHDTAENQQELLDKAIVWVKANPKSQQPFDVKGYKIPGGDPKTPAVAQVLAIAPAMLR CCHHCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHH DKTKGCYPAPEAIMAAAVEGAQVDVDTALRIESRYFTQLAIGQIAKNMIGTFWHGLNAIK HCCCCCCCCHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGASRPADVARWQATKVGVLGAGMMGAGIAYSTAIKGIPVILKDVSVENAEKGKAYSQKL CCCCCCCHHHHHHHHHCCEEECCHHHCCHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHH LDKRVSQGRMTAEKRNQVLALITATADAADLQGCDLIIEAVFENQELKAKVTQEAEQYLA HHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH EGGIFASNTSTLPITGLATASKDAKNFIGLHFFSPVDKMQLVEIIKGKQTSAETLAKAYD CCCEEECCCCCCEEEECCCCCCCHHHHHEEHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH FVQQIAKTPIVVNDSRGFFTSRVFGTFIQEGMRLLAEGVHPAKIEMAALKAGMPVGPLAI HHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEE QDEVSLTLTEHVASETRKALQAEAKDLAKTPVDEVVHTMIHELNRKGKAAGAGFYEYPEH CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH GKKHLWQGLDRWQKDHDISEQEMIDRFLFVQALDTLRCYEEGVLESVIDANVGSIFGIGF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC APWTGGAIQFLNQNGIERSLQRSEELAQKYGERFNPPPYLKEKAQQKQIIQ CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA