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The map label for this gene is yfdE [H]

Identifier: 50086006

GI number: 50086006

Start: 2915918

End: 2917036

Strand: Reverse

Name: yfdE [H]

Synonym: ACIAD2985

Alternate gene names: 50086006

Gene position: 2917036-2915918 (Counterclockwise)

Preceding gene: 50086008

Following gene: 50086005

Centisome position: 81.06

GC content: 41.73

Gene sequence:

>1119_bases
ATGACAACTCCATTAAACGGATTAAAAGTTCTCGATTTTTCAACCTTGCTACCTGGTCCTTTTGCAACGCTATATCTAGC
AGATTTAGGCGCAGAAGTCATACATATTGAATCTCCAACACGACCAGATCTGGTTCGAATTATGCCGCCTTATGCCAATG
GACAGGCAACGGCACATAGCTATCTCAATCGCAATAAACAGTCGATTGCACTTGACCTCAAAGATCCAGCCAGTATTGAG
CTGATCAGATCTAGAATTTCAGAATTTGATATTGTGATTGAGCAGTTTCGTCCAGATGTCATGAAACGTCTGGGGCTTGA
TTACGCAATGTTAACCAAGATCAATCCACGCCTGATTTACTGTTCAATTACAGGGTATGGTCAAACAGGTGTTTATAAAG
ATCGAGCTGGACATGATATTAATTATCTCGCACTTTCTGGCGTTGCGGGTCATAGTGGACGCCTTGAAGATGGTCCTCCA
CCGTTAGGTATTCAAATTGCTGATGTTGCGGGTGGCTCTTTGCATGCAGTGATTGCAATTCTGGCAGCAGTGCTAGAACG
TACGCAAAGTGGGATAGGGCAATATATTGATATTTCGATGACAGATTGTACTGCAAGCTTAAACGCGATGTCTGCGGCAG
CAAGTTTGGCAGCAGATGTGAAACAACAACCAGAAACAGAAATTCTTAATGGTGGCAGTTTTTATGACTATTATCAGACT
CAAGATCATCGTTATATTTCGATAGGAAGTCTTGAACCACAATTTATGCAAGGTTTAGCGATGGTGCTTGAGCTTCCGAT
TTTACTTGAAAAAGGAGCATCCTTTGATCATGAAGATCGTCTAATGGTTAAAGCTGCACTCAAAGCAAAAATTAAAACTA
AGACATGGCAACAATGGCAGGAGATTTTTGCAGGATTAGATCTGTGTGTGGAACCTGTGCTATATCTCGAAGAAGCACTG
AACTCGCCTCTTGCCAAAGAGCGTCAATGGATTGTGGACATACCATTATCACATGAGAGTGATCAAACTCAGCCTCAACT
TGCTTGCCCAATCAAATTTTCACGTTCCACCTTAAGATATGATTTTATTGGACAACCGCTTGGGAAAGGAAATTGGTAA

Upstream 100 bases:

>100_bases
TTGCCGAAATGATCAAGGTAAATGGCTGAACATGACATTGTGCTCTCTTTTATCTGTTTTTAATATGAATAAAAATACAT
AAACGAAGCCTAGGATAAAC

Downstream 100 bases:

>100_bases
CTCAAAATACTTGCAAAAAATGATCACTTGTAAGATATTTTTCATAAAAGGTGTAAAAATAACAGCAAAAATGACATTTT
TATAAGGTGATTGATTAAAA

Product: acyl-CoA transferase/carnitine dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTTPLNGLKVLDFSTLLPGPFATLYLADLGAEVIHIESPTRPDLVRIMPPYANGQATAHSYLNRNKQSIALDLKDPASIE
LIRSRISEFDIVIEQFRPDVMKRLGLDYAMLTKINPRLIYCSITGYGQTGVYKDRAGHDINYLALSGVAGHSGRLEDGPP
PLGIQIADVAGGSLHAVIAILAAVLERTQSGIGQYIDISMTDCTASLNAMSAAASLAADVKQQPETEILNGGSFYDYYQT
QDHRYISIGSLEPQFMQGLAMVLELPILLEKGASFDHEDRLMVKAALKAKIKTKTWQQWQEIFAGLDLCVEPVLYLEEAL
NSPLAKERQWIVDIPLSHESDQTQPQLACPIKFSRSTLRYDFIGQPLGKGNW

Sequences:

>Translated_372_residues
MTTPLNGLKVLDFSTLLPGPFATLYLADLGAEVIHIESPTRPDLVRIMPPYANGQATAHSYLNRNKQSIALDLKDPASIE
LIRSRISEFDIVIEQFRPDVMKRLGLDYAMLTKINPRLIYCSITGYGQTGVYKDRAGHDINYLALSGVAGHSGRLEDGPP
PLGIQIADVAGGSLHAVIAILAAVLERTQSGIGQYIDISMTDCTASLNAMSAAASLAADVKQQPETEILNGGSFYDYYQT
QDHRYISIGSLEPQFMQGLAMVLELPILLEKGASFDHEDRLMVKAALKAKIKTKTWQQWQEIFAGLDLCVEPVLYLEEAL
NSPLAKERQWIVDIPLSHESDQTQPQLACPIKFSRSTLRYDFIGQPLGKGNW
>Mature_371_residues
TTPLNGLKVLDFSTLLPGPFATLYLADLGAEVIHIESPTRPDLVRIMPPYANGQATAHSYLNRNKQSIALDLKDPASIEL
IRSRISEFDIVIEQFRPDVMKRLGLDYAMLTKINPRLIYCSITGYGQTGVYKDRAGHDINYLALSGVAGHSGRLEDGPPP
LGIQIADVAGGSLHAVIAILAAVLERTQSGIGQYIDISMTDCTASLNAMSAAASLAADVKQQPETEILNGGSFYDYYQTQ
DHRYISIGSLEPQFMQGLAMVLELPILLEKGASFDHEDRLMVKAALKAKIKTKTWQQWQEIFAGLDLCVEPVLYLEEALN
SPLAKERQWIVDIPLSHESDQTQPQLACPIKFSRSTLRYDFIGQPLGKGNW

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI266456254, Length=332, Percent_Identity=36.7469879518072, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI42794625, Length=332, Percent_Identity=36.7469879518072, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI266458393, Length=302, Percent_Identity=36.0927152317881, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI266458397, Length=269, Percent_Identity=37.546468401487, Blast_Score=174, Evalue=9e-44,
Organism=Homo sapiens, GI300863124, Length=326, Percent_Identity=31.9018404907975, Blast_Score=166, Evalue=2e-41,
Organism=Homo sapiens, GI300863128, Length=326, Percent_Identity=31.9018404907975, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI300863126, Length=146, Percent_Identity=44.5205479452055, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI13376042, Length=326, Percent_Identity=29.1411042944785, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI266458395, Length=144, Percent_Identity=41.6666666666667, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI42822893, Length=144, Percent_Identity=41.6666666666667, Blast_Score=114, Evalue=2e-25,
Organism=Escherichia coli, GI87082093, Length=334, Percent_Identity=31.437125748503, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1788717, Length=208, Percent_Identity=35.5769230769231, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786222, Length=356, Percent_Identity=26.4044943820225, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI32564160, Length=349, Percent_Identity=31.5186246418338, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI115535051, Length=320, Percent_Identity=32.1875, Blast_Score=156, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24585488, Length=317, Percent_Identity=38.801261829653, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24648431, Length=362, Percent_Identity=31.767955801105, Blast_Score=159, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 41019; Mature: 40887

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPLNGLKVLDFSTLLPGPFATLYLADLGAEVIHIESPTRPDLVRIMPPYANGQATAHS
CCCCCCCEEEEEHHHHCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCHHHHH
YLNRNKQSIALDLKDPASIELIRSRISEFDIVIEQFRPDVMKRLGLDYAMLTKINPRLIY
HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEEECCCCEEEE
CSITGYGQTGVYKDRAGHDINYLALSGVAGHSGRLEDGPPPLGIQIADVAGGSLHAVIAI
EEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHH
LAAVLERTQSGIGQYIDISMTDCTASLNAMSAAASLAADVKQQPETEILNGGSFYDYYQT
HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCEEECEEC
QDHRYISIGSLEPQFMQGLAMVLELPILLEKGASFDHEDRLMVKAALKAKIKTKTWQQWQ
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EIFAGLDLCVEPVLYLEEALNSPLAKERQWIVDIPLSHESDQTQPQLACPIKFSRSTLRY
HHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEECCCCCCCCCCCCEECCEEECCCEEEE
DFIGQPLGKGNW
EECCCCCCCCCC
>Mature Secondary Structure 
TTPLNGLKVLDFSTLLPGPFATLYLADLGAEVIHIESPTRPDLVRIMPPYANGQATAHS
CCCCCCEEEEEHHHHCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCHHHHH
YLNRNKQSIALDLKDPASIELIRSRISEFDIVIEQFRPDVMKRLGLDYAMLTKINPRLIY
HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEEECCCCEEEE
CSITGYGQTGVYKDRAGHDINYLALSGVAGHSGRLEDGPPPLGIQIADVAGGSLHAVIAI
EEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHH
LAAVLERTQSGIGQYIDISMTDCTASLNAMSAAASLAADVKQQPETEILNGGSFYDYYQT
HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCEEECEEC
QDHRYISIGSLEPQFMQGLAMVLELPILLEKGASFDHEDRLMVKAALKAKIKTKTWQQWQ
CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EIFAGLDLCVEPVLYLEEALNSPLAKERQWIVDIPLSHESDQTQPQLACPIKFSRSTLRY
HHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEEECCCCCCCCCCCCEECCEEECCCEEEE
DFIGQPLGKGNW
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]