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The map label for this gene is oprB [H]

Identifier: 50086005

GI number: 50086005

Start: 2914520

End: 2915770

Strand: Reverse

Name: oprB [H]

Synonym: ACIAD2984

Alternate gene names: 50086005

Gene position: 2915770-2914520 (Counterclockwise)

Preceding gene: 50086006

Following gene: 50086004

Centisome position: 81.02

GC content: 41.09

Gene sequence:

>1251_bases
ATGAAATTAGGGAAGACTTTGGCCATCTCTTGCATCTCAATGTTGTCATTGAGTATTTGGACGCAACAGGTAAGTGCTGC
TTCTGCTTTTGATCCATCAAGTGAATGGATGCTCGGGGACTGGAATGGGGAACGGACTGCATTAAAACAAAAAGGGTACG
ATTTCAGTATCGGTTATACAGGCGAAATGGCGACTGTTCTGGATTCAAAAGATACTTCGCGTCATGGTACAGAATACGCA
GGTCAGGTTGCACTTGGTACACATTTTGATCTTAATAAGATTCTGGGTTGGCAAGATACCGAAGCTCAAATTACATTAAC
CCATCGCGATGGACACGATATTAAGAATAAAGCTGCTGCTTTAGAGGGTCAATTAAGTTCAACCCAGGAAGTCTATGGTC
GTGGTCAAACAACACGCTTAACAGACCTATGGATTAAAAAGAAATTTTTTGATCAAGCCCTGGATATTAAAGTGGGTCGT
TTTGGTGAAAGCGAAGATTTCAACCCTGCTGCATGCGATTTCCAAAATTTGGCGCTATGTGGCGATCAAATGGGCAATTG
GAACGCTGGCGATCAAATTCATAACTGGCCAGTCAGCCAGTGGGCTGCGCGTGTAAAATACAACGTTACACCTGAAGTAT
TTGCACAAGTTGGTGTTTATGAATATAACCCAGAAAACCTCAAGCGTAGTAAAGGCTTTAATTTAAGCACAGATGGTTCC
AAAGGCGCTGTGATCCCTGTTGAAGTCGTTTGGCAACCAAAGTCTGGATTAATAAATGGTTTAGCGGGTGAATATCGTGC
CGGTTATTATTATAGTACGGCAGATGCGAATGAAATCAACAGCACCAATAAAGATCATGGGCAAGGCGGATGGTTATCAT
TTATACAGCAATTAACGGCTGTAAATGGTGATACTTCTCGTGGTTTAAAAGTTGTAGGTCAAGCTACATTTTTTGATGAA
GCAACAAGCCGTGTAAAAAACACACAAAGTCTTGCATTTGCTTATAAGGGTTTAGTTGATACTCGTCCAAAAGATGAATT
GGCAATTGGCTTCTCTCGAATCAACCTAAATGATGATGCATATTTGGGTAAAGATGTAGATAGTGAATATAACTCAGAAA
TTTACTACGGAATTGAGGCTACCAACTGGCTCACTGTTCGGCCAAACGTGCAATATGTTCGTCATGTGGGTGCACTTAAA
GATGGTAATAATGCATGGGTAGGTGGCATAAAATTCCAAACTGTATTCTAA

Upstream 100 bases:

>100_bases
AAGGTGTAAAAATAACAGCAAAAATGACATTTTTATAAGGTGATTGATTAAAATAACTCGTAACACAACTTCACACAACG
ACATAAAAGGTTACGTAAGT

Downstream 100 bases:

>100_bases
TTTAAACGTATATTTTCAGAATTTTCTGTTGGGTCATGGAAAGCTTTCTGTGATTCAACTGAGATAAAGTTGTTATACGA
AGCATATCGCTCTCACTCAT

Product: glucose-sensitive porin (OprB-like )

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKLGKTLAISCISMLSLSIWTQQVSAASAFDPSSEWMLGDWNGERTALKQKGYDFSIGYTGEMATVLDSKDTSRHGTEYA
GQVALGTHFDLNKILGWQDTEAQITLTHRDGHDIKNKAAALEGQLSSTQEVYGRGQTTRLTDLWIKKKFFDQALDIKVGR
FGESEDFNPAACDFQNLALCGDQMGNWNAGDQIHNWPVSQWAARVKYNVTPEVFAQVGVYEYNPENLKRSKGFNLSTDGS
KGAVIPVEVVWQPKSGLINGLAGEYRAGYYYSTADANEINSTNKDHGQGGWLSFIQQLTAVNGDTSRGLKVVGQATFFDE
ATSRVKNTQSLAFAYKGLVDTRPKDELAIGFSRINLNDDAYLGKDVDSEYNSEIYYGIEATNWLTVRPNVQYVRHVGALK
DGNNAWVGGIKFQTVF

Sequences:

>Translated_416_residues
MKLGKTLAISCISMLSLSIWTQQVSAASAFDPSSEWMLGDWNGERTALKQKGYDFSIGYTGEMATVLDSKDTSRHGTEYA
GQVALGTHFDLNKILGWQDTEAQITLTHRDGHDIKNKAAALEGQLSSTQEVYGRGQTTRLTDLWIKKKFFDQALDIKVGR
FGESEDFNPAACDFQNLALCGDQMGNWNAGDQIHNWPVSQWAARVKYNVTPEVFAQVGVYEYNPENLKRSKGFNLSTDGS
KGAVIPVEVVWQPKSGLINGLAGEYRAGYYYSTADANEINSTNKDHGQGGWLSFIQQLTAVNGDTSRGLKVVGQATFFDE
ATSRVKNTQSLAFAYKGLVDTRPKDELAIGFSRINLNDDAYLGKDVDSEYNSEIYYGIEATNWLTVRPNVQYVRHVGALK
DGNNAWVGGIKFQTVF
>Mature_416_residues
MKLGKTLAISCISMLSLSIWTQQVSAASAFDPSSEWMLGDWNGERTALKQKGYDFSIGYTGEMATVLDSKDTSRHGTEYA
GQVALGTHFDLNKILGWQDTEAQITLTHRDGHDIKNKAAALEGQLSSTQEVYGRGQTTRLTDLWIKKKFFDQALDIKVGR
FGESEDFNPAACDFQNLALCGDQMGNWNAGDQIHNWPVSQWAARVKYNVTPEVFAQVGVYEYNPENLKRSKGFNLSTDGS
KGAVIPVEVVWQPKSGLINGLAGEYRAGYYYSTADANEINSTNKDHGQGGWLSFIQQLTAVNGDTSRGLKVVGQATFFDE
ATSRVKNTQSLAFAYKGLVDTRPKDELAIGFSRINLNDDAYLGKDVDSEYNSEIYYGIEATNWLTVRPNVQYVRHVGALK
DGNNAWVGGIKFQTVF

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 46024; Mature: 46024

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGKTLAISCISMLSLSIWTQQVSAASAFDPSSEWMLGDWNGERTALKQKGYDFSIGYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEECCC
GEMATVLDSKDTSRHGTEYAGQVALGTHFDLNKILGWQDTEAQITLTHRDGHDIKNKAAA
CCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCEEEEEEECCCCCHHHHHHH
LEGQLSSTQEVYGRGQTTRLTDLWIKKKFFDQALDIKVGRFGESEDFNPAACDFQNLALC
HHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHH
GDQMGNWNAGDQIHNWPVSQWAARVKYNVTPEVFAQVGVYEYNPENLKRSKGFNLSTDGS
CCCCCCCCCCCCCCCCCHHHHHHHEEECCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCC
KGAVIPVEVVWQPKSGLINGLAGEYRAGYYYSTADANEINSTNKDHGQGGWLSFIQQLTA
CCCEEEEEEEECCCCCCHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
VNGDTSRGLKVVGQATFFDEATSRVKNTQSLAFAYKGLVDTRPKDELAIGFSRINLNDDA
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCC
YLGKDVDSEYNSEIYYGIEATNWLTVRPNVQYVRHVGALKDGNNAWVGGIKFQTVF
CCCCCCCCCCCCEEEEEEEECEEEEECCCHHHHHHHCCEECCCCEEECCEEEEEEC
>Mature Secondary Structure
MKLGKTLAISCISMLSLSIWTQQVSAASAFDPSSEWMLGDWNGERTALKQKGYDFSIGYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHCCCEEEECCC
GEMATVLDSKDTSRHGTEYAGQVALGTHFDLNKILGWQDTEAQITLTHRDGHDIKNKAAA
CCEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCEEEEEEECCCCCHHHHHHH
LEGQLSSTQEVYGRGQTTRLTDLWIKKKFFDQALDIKVGRFGESEDFNPAACDFQNLALC
HHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCHHHHHHH
GDQMGNWNAGDQIHNWPVSQWAARVKYNVTPEVFAQVGVYEYNPENLKRSKGFNLSTDGS
CCCCCCCCCCCCCCCCCHHHHHHHEEECCCHHHHHHCCCEEECHHHHHHHCCCCCCCCCC
KGAVIPVEVVWQPKSGLINGLAGEYRAGYYYSTADANEINSTNKDHGQGGWLSFIQQLTA
CCCEEEEEEEECCCCCCHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
VNGDTSRGLKVVGQATFFDEATSRVKNTQSLAFAYKGLVDTRPKDELAIGFSRINLNDDA
CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCC
YLGKDVDSEYNSEIYYGIEATNWLTVRPNVQYVRHVGALKDGNNAWVGGIKFQTVF
CCCCCCCCCCCCEEEEEEEECEEEEECCCHHHHHHHCCEECCCCEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]