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The map label for this gene is yqaJ [H]

Identifier: 50085849

GI number: 50085849

Start: 2745769

End: 2746221

Strand: Reverse

Name: yqaJ [H]

Synonym: ACIAD2799

Alternate gene names: 50085849

Gene position: 2746221-2745769 (Counterclockwise)

Preceding gene: 50085850

Following gene: 50085844

Centisome position: 76.31

GC content: 44.81

Gene sequence:

>453_bases
ATGTCGATGCTGGAACTATGGATGATCAAGACAGGCCGGATGCAACAAAGTATTGAAGATAAAAGTACAAGTTATGCACC
TTTATATTGGGGTAAACAGCTTGAACCTTTAATTGCTGAATACTACAGCCTGCACACCAATAGCAAAGTTAGACGAGTCA
ATGCAGTCCTGCAACATCCAGATCCAGACAACCACTTTATGCTGGCTAATCTGGATTACGCTGTGGTCGGCAGTGATGAG
GTACAGATTCTGGAATGCAAAAGCGTGGGAGAACATGGTGCCAGACGCTGGCGTGATGGTATTCCACTGTATGTGCTCTG
TCAGGTACAGCAGGATTTTATCAGGAGGCTCTGGATCATGTGGCACGTCAAGGTTATGCCAATGGCAGATTTGAGGTGGA
TGGTGAAGAGGGTTTGGATATTGTTGAGGAGTTTTATTCGGATGAATCAATAA

Upstream 100 bases:

>100_bases
GGCAAATACCCGAAAGCTGAGCTATCAACAATGGCTAGAGATTCGCAAATAAGGCATTGGTAGTAGTGATGCTGCTACGG
CTTGTGGACTAAATCCCTAC

Downstream 100 bases:

>100_bases
TAGAGCAATATCAATAAACCCATGATTTCACTCATGTTCAGGATATTCAGAAAGGATTGCAGCAGTTGGTGCAGGCTTTG
AATTGAATAATAAAGGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSMLELWMIKTGRMQQSIEDKSTSYAPLYWGKQLEPLIAEYYSLHTNSKVRRVNAVLQHPDPDNHFMLANLDYAVVGSDE
VQILECKSVGEHGARRWRDGIPLYVLCQVQQDFIRRLWIMWHVKVMPMADLRWMVKRVWILLRSFIRMNQ

Sequences:

>Translated_150_residues
MSMLELWMIKTGRMQQSIEDKSTSYAPLYWGKQLEPLIAEYYSLHTNSKVRRVNAVLQHPDPDNHFMLANLDYAVVGSDE
VQILECKSVGEHGARRWRDGIPLYVLCQVQQDFIRRLWIMWHVKVMPMADLRWMVKRVWILLRSFIRMNQ
>Mature_149_residues
SMLELWMIKTGRMQQSIEDKSTSYAPLYWGKQLEPLIAEYYSLHTNSKVRRVNAVLQHPDPDNHFMLANLDYAVVGSDEV
QILECKSVGEHGARRWRDGIPLYVLCQVQQDFIRRLWIMWHVKVMPMADLRWMVKRVWILLRSFIRMNQ

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011604
- InterPro:   IPR017482
- InterPro:   IPR011335
- InterPro:   IPR019080 [H]

Pfam domain/function: PF09588 YqaJ [H]

EC number: NA

Molecular weight: Translated: 17893; Mature: 17762

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLELWMIKTGRMQQSIEDKSTSYAPLYWGKQLEPLIAEYYSLHTNSKVRRVNAVLQHP
CCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCC
DPDNHFMLANLDYAVVGSDEVQILECKSVGEHGARRWRDGIPLYVLCQVQQDFIRRLWIM
CCCCCEEEEECCEEEECCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
WHVKVMPMADLRWMVKRVWILLRSFIRMNQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMLELWMIKTGRMQQSIEDKSTSYAPLYWGKQLEPLIAEYYSLHTNSKVRRVNAVLQHP
CHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCC
DPDNHFMLANLDYAVVGSDEVQILECKSVGEHGARRWRDGIPLYVLCQVQQDFIRRLWIM
CCCCCEEEEECCEEEECCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
WHVKVMPMADLRWMVKRVWILLRSFIRMNQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]