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The map label for this gene is yjcR [C]

Identifier: 50085718

GI number: 50085718

Start: 2602541

End: 2603671

Strand: Direct

Name: yjcR [C]

Synonym: ACIAD2649

Alternate gene names: 50085718

Gene position: 2602541-2603671 (Clockwise)

Preceding gene: 50085717

Following gene: 50085719

Centisome position: 72.32

GC content: 42.71

Gene sequence:

>1131_bases
ATGAAGCCAGATTACTCATCTTCAGATATGGAACATTCGGTTTCCTCTGCAACAGAAACTGAAAAAGATACACGATCTCA
ACAAGACCCTGAATTTTCTCATCACGCTCAAGAAAAAACAGAAAATTTAAGATCGTCTTCTAGTCAGAAATCGATAGTTA
AACTGATTGGTGTGATTATTGTTATTCTCTTAATCGCTTTGATTTTGTATGGCTTATGGAAAGCCTATCAACCGCGTAAG
GTCGCACTCCAAGGGCGTGTTGAAGCAGAAACGATATATATCAGTACCAAGGTTCCTAGCCGGGTAGATGAAATTTATGT
TCAGGAAGGACAAGCGATTAAAAAAGGAGAAGCGCTTATTCGCTTAGTCAGCCCAGAAGTCGAAGCAAAAAAACAACAGG
CTCAGGCTGCATTGCAATCAGCACTGGCTTTACAATCCACCGCAGAACGTGGCTCTCAAGAAGAAAATATCGAAACACTT
TATGCCAACTGGCAAAGCGTAAAAGCTCAGGCCGAACTGGCAGCAACCACTTATCGTCGTGGAGAAAACCTGTATAAGGA
AGGTGTCATTTCACGTCAGCGTCGCGATGAAATGTTTGCCGCGCAACGTTCTGCTCAAGCATTAACCGAAGCCGCGTATC
AACAATATGCGCGTACCAAACGTGGCAGTACACCACAGCAAAAATCTATGGCCGATGCTCAAGTCGAAATTGCACGTGCG
GCTTTAAGTGAAGCACAATCTCTTGAAGGTGAAACCAAACTGTATGCACCTGTTAACGGTACCATTTCCAAAATATATCC
AAAACCATCAGAACTTGTCGCGGCGGCTGTTCCAGTGCTGAGTATTCTGGAAGATCATGACCTTTGGATCAGTCTGAATG
TACGTGAAGACCAATATCGTTCGGTCTATCAACAAAAAACGCTCGAAGGTTATATCCCAGCTCTGGATCGAAAAGTGGAA
TTTAAAATCAAGCATATTGATGCAGAAGGTGAATTTGCAACCATTAAAACCACTCGTCAAACTGGTGGTTATGATATTCG
CAGTTTTAAGCTTCACCTGACCCCTGTACAGCCTGTTACAGATCTTAAAGTCGGCATGAGTGTGATATTCAATGTATTAG
AGGCCAAATAA

Upstream 100 bases:

>100_bases
TCGCTGGCCACATTATTACAAAGCCATGGCTCAATTGACCAATTTAAAACTTATCTCAACCAGCCAAATACGGTTTATAT
CCGTTAATTCAGAGGGAATC

Downstream 100 bases:

>100_bases
GTATGTGGGCCTGTATACGGCGTGAGTTGCTCTATCTACTTAGAAATAAGTGGGATCTTGCAATGGTGACGTTTGCCCCA
CTGTTTGTGATCATTTTATT

Product: membrane-fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKPDYSSSDMEHSVSSATETEKDTRSQQDPEFSHHAQEKTENLRSSSSQKSIVKLIGVIIVILLIALILYGLWKAYQPRK
VALQGRVEAETIYISTKVPSRVDEIYVQEGQAIKKGEALIRLVSPEVEAKKQQAQAALQSALALQSTAERGSQEENIETL
YANWQSVKAQAELAATTYRRGENLYKEGVISRQRRDEMFAAQRSAQALTEAAYQQYARTKRGSTPQQKSMADAQVEIARA
ALSEAQSLEGETKLYAPVNGTISKIYPKPSELVAAAVPVLSILEDHDLWISLNVREDQYRSVYQQKTLEGYIPALDRKVE
FKIKHIDAEGEFATIKTTRQTGGYDIRSFKLHLTPVQPVTDLKVGMSVIFNVLEAK

Sequences:

>Translated_376_residues
MKPDYSSSDMEHSVSSATETEKDTRSQQDPEFSHHAQEKTENLRSSSSQKSIVKLIGVIIVILLIALILYGLWKAYQPRK
VALQGRVEAETIYISTKVPSRVDEIYVQEGQAIKKGEALIRLVSPEVEAKKQQAQAALQSALALQSTAERGSQEENIETL
YANWQSVKAQAELAATTYRRGENLYKEGVISRQRRDEMFAAQRSAQALTEAAYQQYARTKRGSTPQQKSMADAQVEIARA
ALSEAQSLEGETKLYAPVNGTISKIYPKPSELVAAAVPVLSILEDHDLWISLNVREDQYRSVYQQKTLEGYIPALDRKVE
FKIKHIDAEGEFATIKTTRQTGGYDIRSFKLHLTPVQPVTDLKVGMSVIFNVLEAK
>Mature_376_residues
MKPDYSSSDMEHSVSSATETEKDTRSQQDPEFSHHAQEKTENLRSSSSQKSIVKLIGVIIVILLIALILYGLWKAYQPRK
VALQGRVEAETIYISTKVPSRVDEIYVQEGQAIKKGEALIRLVSPEVEAKKQQAQAALQSALALQSTAERGSQEENIETL
YANWQSVKAQAELAATTYRRGENLYKEGVISRQRRDEMFAAQRSAQALTEAAYQQYARTKRGSTPQQKSMADAQVEIARA
ALSEAQSLEGETKLYAPVNGTISKIYPKPSELVAAAVPVLSILEDHDLWISLNVREDQYRSVYQQKTLEGYIPALDRKVE
FKIKHIDAEGEFATIKTTRQTGGYDIRSFKLHLTPVQPVTDLKVGMSVIFNVLEAK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790519, Length=224, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1789900, Length=249, Percent_Identity=27.710843373494, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 42036; Mature: 42036

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDYSSSDMEHSVSSATETEKDTRSQQDPEFSHHAQEKTENLRSSSSQKSIVKLIGVII
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VILLIALILYGLWKAYQPRKVALQGRVEAETIYISTKVPSRVDEIYVQEGQAIKKGEALI
HHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHE
RLVSPEVEAKKQQAQAALQSALALQSTAERGSQEENIETLYANWQSVKAQAELAATTYRR
EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GENLYKEGVISRQRRDEMFAAQRSAQALTEAAYQQYARTKRGSTPQQKSMADAQVEIARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALSEAQSLEGETKLYAPVNGTISKIYPKPSELVAAAVPVLSILEDHDLWISLNVREDQYR
HHHHHHHCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
SVYQQKTLEGYIPALDRKVEFKIKHIDAEGEFATIKTTRQTGGYDIRSFKLHLTPVQPVT
HHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHH
DLKVGMSVIFNVLEAK
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPDYSSSDMEHSVSSATETEKDTRSQQDPEFSHHAQEKTENLRSSSSQKSIVKLIGVII
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VILLIALILYGLWKAYQPRKVALQGRVEAETIYISTKVPSRVDEIYVQEGQAIKKGEALI
HHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHE
RLVSPEVEAKKQQAQAALQSALALQSTAERGSQEENIETLYANWQSVKAQAELAATTYRR
EECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GENLYKEGVISRQRRDEMFAAQRSAQALTEAAYQQYARTKRGSTPQQKSMADAQVEIARA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ALSEAQSLEGETKLYAPVNGTISKIYPKPSELVAAAVPVLSILEDHDLWISLNVREDQYR
HHHHHHHCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
SVYQQKTLEGYIPALDRKVEFKIKHIDAEGEFATIKTTRQTGGYDIRSFKLHLTPVQPVT
HHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHH
DLKVGMSVIFNVLEAK
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]