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The map label for this gene is ybhR [C]

Identifier: 50085719

GI number: 50085719

Start: 2603674

End: 2604804

Strand: Direct

Name: ybhR [C]

Synonym: ACIAD2650

Alternate gene names: 50085719

Gene position: 2603674-2604804 (Clockwise)

Preceding gene: 50085718

Following gene: 50085720

Centisome position: 72.35

GC content: 41.11

Gene sequence:

>1131_bases
ATGTGGGCCTGTATACGGCGTGAGTTGCTCTATCTACTTAGAAATAAGTGGGATCTTGCAATGGTGACGTTTGCCCCACT
GTTTGTGATCATTTTATTTAGCAGTATGTTTTATCAAGGTAAACCCAAGCATTTACCTATTGCAATCATTGATCAAGACC
ATAGTCAGCTCAGCCGTTTGATTGAGCGGGATTTATCGCTCAACAGTACACTCGAAATACGTTATCAACTTCAAAATCAA
GATGAAGCAGAGCAACTGTTAAATCAAACCAAAATCTGGGGCTATGTTCATATTCCAGAGGGTGCAGAGACACGTTTAGT
TAAAGCTCAGGATGCGCAGATTAGCATTGCATTTAATCAGTCATTTTTTAGCGTAGGTAATTCTATTTCTTCAGCCATGC
TGATCAGTACATTGCGTGCAATGGGAACTTTTGGCGGCGAACATTATTTCTCAAATATGATTCCTTATATAGAGCTCCCA
ACTCCGCATGTCAAAATATCAACACTATACAATCCTTCCTTAAGCTATGAGTTTTATCTTGAACCCTTCATGATTCCAGC
GATTTTGCACTTATTGCTCTGTTGTTGTGTGGCATTTTCGATTGGTCAGGAATTTAAACGTGGCACACTTAAAGACTGGG
CCAACCAGCACAATTTTATCTCTGTGCTTTTTGCAAAAAATCTGGTGTATGTTGCCATTTTCTGTATCTGGACATGGGTC
TGGATGTTTTGGCTGATTGAGATTCGCGGCTGGTTCGTTGCGGGTCACCTTAGTCTTTTATTGATGGGTCAGGTCTTTCT
ATACTTTGCCTATGCGTTAATTAGCTCAACGGTTGTGATTGCCACCCAAAGTCTGAGCCGTACTTTTGGCTTTATCGCAG
TTTATGGTGGCTCATCTTTGAGCTTCGCAGGCGTCACACTTCCGCTGAATAATGCCCCCATTTTCACTCAATTTTGGTCG
ATGATTATCCCCTACACGCCTTATGCAAAACTACAAACCGAACAGTGGGTTGTTGGCAGTGATATGAGTGTTTCTATTTG
GCCGTTACTGATTTTATGTGGGTACTGTATTTTTTATTTTGCACTCAGTCGCTTTCTTTTAAGAAAACGTATCTTAGGCG
GTGATCAATGA

Upstream 100 bases:

>100_bases
ATATTCGCAGTTTTAAGCTTCACCTGACCCCTGTACAGCCTGTTACAGATCTTAAAGTCGGCATGAGTGTGATATTCAAT
GTATTAGAGGCCAAATAAGT

Downstream 100 bases:

>100_bases
AGAAATTCTGGTATCACTATTGTCAGACATTTAAAGATATTGTCAAAAACTCATCAATCCTTACCACAGTGGTATTATCG
GTATTTTTTTATAGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transport System Permease Protein; Abc-2 Type Transporter; ABC-2 Type Transporter Family; Permease Component Of ABC Transporter; Transport-Related Membrane Protein; Export ABC Transporter Permease; ABC-2 Type Transporter Superfamily; Inner Membrane Transport Permease; ABC Multidrug Efflux Pump Inner Membrane Subunit; ABC-2 Type Transport System Permease; ABC Transporter Transmembrane Permease; Nitrate ABC Transporter Permease Protein; Daunorubicin Resistance Transmembrane Protein; Transmembrane Protein; Multidrug ABC Transporter Permease Component; ABC Transporter Inner Membrane Subunit; Conserved Transporter; ABC Transporter Permease; Multidrug ABC Transporter Permease Protein; ABC-Type Multidrug Transport System; ABC Transporter Transmembrane Protein; Export ABC Transporter Permease Protein; ABC-2 Type Transporter Family Protein; Inner Membrane Permease Protein; ABC Transporter Permease Protein; ABC-Type Multidrug Transporter Permease Component

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MWACIRRELLYLLRNKWDLAMVTFAPLFVIILFSSMFYQGKPKHLPIAIIDQDHSQLSRLIERDLSLNSTLEIRYQLQNQ
DEAEQLLNQTKIWGYVHIPEGAETRLVKAQDAQISIAFNQSFFSVGNSISSAMLISTLRAMGTFGGEHYFSNMIPYIELP
TPHVKISTLYNPSLSYEFYLEPFMIPAILHLLLCCCVAFSIGQEFKRGTLKDWANQHNFISVLFAKNLVYVAIFCIWTWV
WMFWLIEIRGWFVAGHLSLLLMGQVFLYFAYALISSTVVIATQSLSRTFGFIAVYGGSSLSFAGVTLPLNNAPIFTQFWS
MIIPYTPYAKLQTEQWVVGSDMSVSIWPLLILCGYCIFYFALSRFLLRKRILGGDQ

Sequences:

>Translated_376_residues
MWACIRRELLYLLRNKWDLAMVTFAPLFVIILFSSMFYQGKPKHLPIAIIDQDHSQLSRLIERDLSLNSTLEIRYQLQNQ
DEAEQLLNQTKIWGYVHIPEGAETRLVKAQDAQISIAFNQSFFSVGNSISSAMLISTLRAMGTFGGEHYFSNMIPYIELP
TPHVKISTLYNPSLSYEFYLEPFMIPAILHLLLCCCVAFSIGQEFKRGTLKDWANQHNFISVLFAKNLVYVAIFCIWTWV
WMFWLIEIRGWFVAGHLSLLLMGQVFLYFAYALISSTVVIATQSLSRTFGFIAVYGGSSLSFAGVTLPLNNAPIFTQFWS
MIIPYTPYAKLQTEQWVVGSDMSVSIWPLLILCGYCIFYFALSRFLLRKRILGGDQ
>Mature_376_residues
MWACIRRELLYLLRNKWDLAMVTFAPLFVIILFSSMFYQGKPKHLPIAIIDQDHSQLSRLIERDLSLNSTLEIRYQLQNQ
DEAEQLLNQTKIWGYVHIPEGAETRLVKAQDAQISIAFNQSFFSVGNSISSAMLISTLRAMGTFGGEHYFSNMIPYIELP
TPHVKISTLYNPSLSYEFYLEPFMIPAILHLLLCCCVAFSIGQEFKRGTLKDWANQHNFISVLFAKNLVYVAIFCIWTWV
WMFWLIEIRGWFVAGHLSLLLMGQVFLYFAYALISSTVVIATQSLSRTFGFIAVYGGSSLSFAGVTLPLNNAPIFTQFWS
MIIPYTPYAKLQTEQWVVGSDMSVSIWPLLILCGYCIFYFALSRFLLRKRILGGDQ

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43136; Mature: 43136

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWACIRRELLYLLRNKWDLAMVTFAPLFVIILFSSMFYQGKPKHLPIAIIDQDHSQLSRL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHH
IERDLSLNSTLEIRYQLQNQDEAEQLLNQTKIWGYVHIPEGAETRLVKAQDAQISIAFNQ
HHHHCCCCCEEEEEEEECCCHHHHHHHHHHHEEEEEECCCCCCEEEEEECCCEEEEEECC
SFFSVGNSISSAMLISTLRAMGTFGGEHYFSNMIPYIELPTPHVKISTLYNPSLSYEFYL
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCEEEEEEECCCCCEEEEE
EPFMIPAILHLLLCCCVAFSIGQEFKRGTLKDWANQHNFISVLFAKNLVYVAIFCIWTWV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
WMFWLIEIRGWFVAGHLSLLLMGQVFLYFAYALISSTVVIATQSLSRTFGFIAVYGGSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCEEEEECCCCE
SFAGVTLPLNNAPIFTQFWSMIIPYTPYAKLQTEQWVVGSDMSVSIWPLLILCGYCIFYF
EEEEEEEECCCCCHHHHHHHHHCCCCCCHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
ALSRFLLRKRILGGDQ
HHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWACIRRELLYLLRNKWDLAMVTFAPLFVIILFSSMFYQGKPKHLPIAIIDQDHSQLSRL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHH
IERDLSLNSTLEIRYQLQNQDEAEQLLNQTKIWGYVHIPEGAETRLVKAQDAQISIAFNQ
HHHHCCCCCEEEEEEEECCCHHHHHHHHHHHEEEEEECCCCCCEEEEEECCCEEEEEECC
SFFSVGNSISSAMLISTLRAMGTFGGEHYFSNMIPYIELPTPHVKISTLYNPSLSYEFYL
HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCEEEEEEECCCCCEEEEE
EPFMIPAILHLLLCCCVAFSIGQEFKRGTLKDWANQHNFISVLFAKNLVYVAIFCIWTWV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
WMFWLIEIRGWFVAGHLSLLLMGQVFLYFAYALISSTVVIATQSLSRTFGFIAVYGGSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHCCEEEEECCCCE
SFAGVTLPLNNAPIFTQFWSMIIPYTPYAKLQTEQWVVGSDMSVSIWPLLILCGYCIFYF
EEEEEEEECCCCCHHHHHHHHHCCCCCCHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
ALSRFLLRKRILGGDQ
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA