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The map label for this gene is pcaC [H]

Identifier: 50085615

GI number: 50085615

Start: 2496859

End: 2497248

Strand: Reverse

Name: pcaC [H]

Synonym: ACIAD2538

Alternate gene names: 50085615

Gene position: 2497248-2496859 (Counterclockwise)

Preceding gene: 50085616

Following gene: 50085614

Centisome position: 69.39

GC content: 42.56

Gene sequence:

>390_bases
ATGATGAGCAATGACAGATTTGAGAAGGGTTTAAGTATTCGTAAACAAGTCTTGGGCGAAGAATACGTCAACAATTCGAT
CAATAATGCAGACGATTTTAATCTGCCGTTGCAGGAACTCGTTACTGAGTATTGCTGGGGTGCAGTTTGGGGGCGAGAAG
AACTGTCGAAGCCAGAAAGAAGTTTGATTAATCTGGCGATGATTTCTGCACTGAATCGGCCACATGAATTAAAACTGCAT
GTGAAGGGCGCGCTACGTAATGGTGTGCCCAAAGAAAAAATTCGTGAAGTATTGCTACAAGTCGCGATTTACTGTGGCGT
ACCCGCAGCTGTGGATAGTTTTCGTATTGCCAAAGAAGCAATTAAGGAATACGAAGCAGAAAATATTTGA

Upstream 100 bases:

>100_bases
CACCTTTTGGTGGAATCAAGCATTCTGGTCTGGGGCGTGAAGGCTCAAAATATGGCATCGAAGATTATCTTGAAATCAAG
TACACACTATTTGGAGGATT

Downstream 100 bases:

>100_bases
AATGAGTTGTAGCGTGCAAATCTAGCTCAGCGATATCAAATTATCTTATTTATGGTGAGATCAGAATCTTTTGCTTAACT
TAAGGGAAGAAGGTTCTGCA

Product: gamma-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MMSNDRFEKGLSIRKQVLGEEYVNNSINNADDFNLPLQELVTEYCWGAVWGREELSKPERSLINLAMISALNRPHELKLH
VKGALRNGVPKEKIREVLLQVAIYCGVPAAVDSFRIAKEAIKEYEAENI

Sequences:

>Translated_129_residues
MMSNDRFEKGLSIRKQVLGEEYVNNSINNADDFNLPLQELVTEYCWGAVWGREELSKPERSLINLAMISALNRPHELKLH
VKGALRNGVPKEKIREVLLQVAIYCGVPAAVDSFRIAKEAIKEYEAENI
>Mature_129_residues
MMSNDRFEKGLSIRKQVLGEEYVNNSINNADDFNLPLQELVTEYCWGAVWGREELSKPERSLINLAMISALNRPHELKLH
VKGALRNGVPKEKIREVLLQVAIYCGVPAAVDSFRIAKEAIKEYEAENI

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14656; Mature: 14656

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSNDRFEKGLSIRKQVLGEEYVNNSINNADDFNLPLQELVTEYCWGAVWGREELSKPER
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHH
SLINLAMISALNRPHELKLHVKGALRNGVPKEKIREVLLQVAIYCGVPAAVDSFRIAKEA
HHHHHHHHHHHCCCCHHHEEEHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IKEYEAENI
HHHHHCCCC
>Mature Secondary Structure
MMSNDRFEKGLSIRKQVLGEEYVNNSINNADDFNLPLQELVTEYCWGAVWGREELSKPER
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHH
SLINLAMISALNRPHELKLHVKGALRNGVPKEKIREVLLQVAIYCGVPAAVDSFRIAKEA
HHHHHHHHHHHCCCCHHHEEEHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IKEYEAENI
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]