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The map label for this gene is soxC [H]

Identifier: 50085614

GI number: 50085614

Start: 2495185

End: 2496498

Strand: Reverse

Name: soxC [H]

Synonym: ACIAD2537

Alternate gene names: 50085614

Gene position: 2496498-2495185 (Counterclockwise)

Preceding gene: 50085615

Following gene: 50085613

Centisome position: 69.37

GC content: 38.74

Gene sequence:

>1314_bases
TTGGAATATATAATGACCAATCTAAATGTTCACGCTTTTATCACAGAGCTTTCGCATCAGCCTGAATTAGACACCGCAAC
CATTTATCGTGTATGGGGGGAACCAGTTTCAGATCGTTATGATGATTTAGCACAACATTTCCGTCCCGTATTTCAAAAAA
TAAAACAGGGTACTTTAGCCAGAGAGCAGACACATCAATTACCATTTGAACAGTTAGCATGGCTTAAAGACAGTGGATTT
ACTCGTTTGCGTTTGCCTAAACAATATGGCGGTTTTGAGGCGAGTATACCTGAATTATTTGCCCTATTAATTGAGCTTGC
CGAAGCAGATTCCAATTTACCGCAAATTTTACGTATTCACTTTGGTTTTACCGAAGATGTACTTATCTCCAAAAACCAAA
AGTTTAAACAACGCTGGCTAAAGCGTATAGCACGTGGTGAAACCATTGGTAGTGCTTGGTCCGAAGGTGGTCAGCAATCA
ATTCATCAGTTTCAAACGCATTTAAGTAAAGATCATGATGATCAAATTCTGGTGACGGGAAAAAAATACTATACTACTGG
GAGTTTGTTTGCCGATTGGATCGACGTTGGAGTAACCGATTTTGAGGGCGAATCGGCATCTGTCATTATTGCAAGAGAAG
CAAAAGGCGTCGAAATTATAGATGATTGGAATGGATTTGGTCAGCAGTTGACTGCAAGTGGTACGGCTATTTTTAAAGAG
GTACAGATAGATGCTAACGAAATTTTGAATGATGAATTACGTTTTAAATATTCGTCTGCCTTTTATCAATTGGTACAGCT
TGCCATTATCACTGGCTTGGCACGTGCAGCAACCTATGATGTTTCTGCTGCTGTTGCTAAACGAACCCGTAACTACTCTC
ATGCCAATAGTCAATTTATTCAAAATGATCCACAAATTTTGCAAGTGGTAGGACAAGTTCGTACCGCTGCATACAGTGCT
GGGGTTTTAGTTGAAAAAGTTGCTCAAAGTTTACAGCGTACGTATTTAGCTGCATTGCAAGATAATGAACAAAAAGAAGC
CGATCTAAATGCATTGACAGAATTAGAAAGTGCTCAAGCACAAGGTGTTATTACCACATTGGTGCTTAATGCATCTACAC
TTTTATTTGATGCACTGGGGGCATCAGCATCAGATAAAAAATATGGTTTTGATCGCTATTGGCGTAATGTGAGAACCTTG
TCTTCACATAATCCTCGTATTTTTAAAGAACGAATTATTGGAGATTTTAGTGTCAATGGGAAATTACCTCCTTATCAATG
GCGAATTGGGAATGCAATAGAACTAAATAAATAG

Upstream 100 bases:

>100_bases
AGAGAAATTTTCTATTTTTTATGAGAAAAAAAGCTTTTCATAGATTTTTTTGTTTTTTTGAAGTTCATACATTTTAAATA
TGATAAAAAAATTATGAATT

Downstream 100 bases:

>100_bases
AAAAATATAGAATTAAAATGAATATCATGATCCATTATTAAGATAATGGATCTATTTGTTATTATAGTTTGATATATGAA
TAAGCTCAGAAATTATTATG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MEYIMTNLNVHAFITELSHQPELDTATIYRVWGEPVSDRYDDLAQHFRPVFQKIKQGTLAREQTHQLPFEQLAWLKDSGF
TRLRLPKQYGGFEASIPELFALLIELAEADSNLPQILRIHFGFTEDVLISKNQKFKQRWLKRIARGETIGSAWSEGGQQS
IHQFQTHLSKDHDDQILVTGKKYYTTGSLFADWIDVGVTDFEGESASVIIAREAKGVEIIDDWNGFGQQLTASGTAIFKE
VQIDANEILNDELRFKYSSAFYQLVQLAIITGLARAATYDVSAAVAKRTRNYSHANSQFIQNDPQILQVVGQVRTAAYSA
GVLVEKVAQSLQRTYLAALQDNEQKEADLNALTELESAQAQGVITTLVLNASTLLFDALGASASDKKYGFDRYWRNVRTL
SSHNPRIFKERIIGDFSVNGKLPPYQWRIGNAIELNK

Sequences:

>Translated_437_residues
MEYIMTNLNVHAFITELSHQPELDTATIYRVWGEPVSDRYDDLAQHFRPVFQKIKQGTLAREQTHQLPFEQLAWLKDSGF
TRLRLPKQYGGFEASIPELFALLIELAEADSNLPQILRIHFGFTEDVLISKNQKFKQRWLKRIARGETIGSAWSEGGQQS
IHQFQTHLSKDHDDQILVTGKKYYTTGSLFADWIDVGVTDFEGESASVIIAREAKGVEIIDDWNGFGQQLTASGTAIFKE
VQIDANEILNDELRFKYSSAFYQLVQLAIITGLARAATYDVSAAVAKRTRNYSHANSQFIQNDPQILQVVGQVRTAAYSA
GVLVEKVAQSLQRTYLAALQDNEQKEADLNALTELESAQAQGVITTLVLNASTLLFDALGASASDKKYGFDRYWRNVRTL
SSHNPRIFKERIIGDFSVNGKLPPYQWRIGNAIELNK
>Mature_437_residues
MEYIMTNLNVHAFITELSHQPELDTATIYRVWGEPVSDRYDDLAQHFRPVFQKIKQGTLAREQTHQLPFEQLAWLKDSGF
TRLRLPKQYGGFEASIPELFALLIELAEADSNLPQILRIHFGFTEDVLISKNQKFKQRWLKRIARGETIGSAWSEGGQQS
IHQFQTHLSKDHDDQILVTGKKYYTTGSLFADWIDVGVTDFEGESASVIIAREAKGVEIIDDWNGFGQQLTASGTAIFKE
VQIDANEILNDELRFKYSSAFYQLVQLAIITGLARAATYDVSAAVAKRTRNYSHANSQFIQNDPQILQVVGQVRTAAYSA
GVLVEKVAQSLQRTYLAALQDNEQKEADLNALTELESAQAQGVITTLVLNASTLLFDALGASASDKKYGFDRYWRNVRTL
SSHNPRIFKERIIGDFSVNGKLPPYQWRIGNAIELNK

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 49299; Mature: 49299

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYIMTNLNVHAFITELSHQPELDTATIYRVWGEPVSDRYDDLAQHFRPVFQKIKQGTLA
CCEEEECCCHHHHHHHHCCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHH
REQTHQLPFEQLAWLKDSGFTRLRLPKQYGGFEASIPELFALLIELAEADSNLPQILRIH
HHHHHCCCHHHHHHHHCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
FGFTEDVLISKNQKFKQRWLKRIARGETIGSAWSEGGQQSIHQFQTHLSKDHDDQILVTG
CCCCCHHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEC
KKYYTTGSLFADWIDVGVTDFEGESASVIIAREAKGVEIIDDWNGFGQQLTASGTAIFKE
CEEEECHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHHCCCHHHHHH
VQIDANEILNDELRFKYSSAFYQLVQLAIITGLARAATYDVSAAVAKRTRNYSHANSQFI
HCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
QNDPQILQVVGQVRTAAYSAGVLVEKVAQSLQRTYLAALQDNEQKEADLNALTELESAQA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QGVITTLVLNASTLLFDALGASASDKKYGFDRYWRNVRTLSSHNPRIFKERIIGDFSVNG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEECCC
KLPPYQWRIGNAIELNK
CCCCCEEECCCEEECCC
>Mature Secondary Structure
MEYIMTNLNVHAFITELSHQPELDTATIYRVWGEPVSDRYDDLAQHFRPVFQKIKQGTLA
CCEEEECCCHHHHHHHHCCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHH
REQTHQLPFEQLAWLKDSGFTRLRLPKQYGGFEASIPELFALLIELAEADSNLPQILRIH
HHHHHCCCHHHHHHHHCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
FGFTEDVLISKNQKFKQRWLKRIARGETIGSAWSEGGQQSIHQFQTHLSKDHDDQILVTG
CCCCCHHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEC
KKYYTTGSLFADWIDVGVTDFEGESASVIIAREAKGVEIIDDWNGFGQQLTASGTAIFKE
CEEEECHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHHCCCHHHHHH
VQIDANEILNDELRFKYSSAFYQLVQLAIITGLARAATYDVSAAVAKRTRNYSHANSQFI
HCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
QNDPQILQVVGQVRTAAYSAGVLVEKVAQSLQRTYLAALQDNEQKEADLNALTELESAQA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QGVITTLVLNASTLLFDALGASASDKKYGFDRYWRNVRTLSSHNPRIFKERIIGDFSVNG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEECCC
KLPPYQWRIGNAIELNK
CCCCCEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]