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The map label for this gene is soxA [H]

Identifier: 50085613

GI number: 50085613

Start: 2493631

End: 2494989

Strand: Reverse

Name: soxA [H]

Synonym: ACIAD2536

Alternate gene names: 50085613

Gene position: 2494989-2493631 (Counterclockwise)

Preceding gene: 50085614

Following gene: 50085612

Centisome position: 69.33

GC content: 38.7

Gene sequence:

>1359_bases
ATGAATTGTATCGCCCATCAATCTCCTGGATTATGGCGTCATCCTCAAGATCGCTCTACACAATATAAAGATATTGAATA
CTGGACTGATCTTTCAAAAATTTTAGAGAAAGGATTATTTGACGGTATTTTTATTGCAGATGTTTTAGGAATTTACGACG
TTTATCATAATAGTGCAGAGCATGCCCTTACGGGTGCTGTGCAAGTTCCTGTCAATGATCCCTTACAAATTATACCTGCA
ATGGCTGCTGTAACGAAGCATCTGGGCTTTGGACTCACAACGTCTATTTCTTTTGAGCATCCTTATCCTTTCGCCCGCCG
AATCAGTACTTTAGATCATCTGACTAAAGGGCGTGTGGGCTGGAATATTGTCACATCTTATCTTGAAAGTGGTTCTAAAA
ATCTGGGATTAAAAACTCAGGTTAATCATGACAATCGTTATGATATTGCAGATGAATATTTAGAGGTTCTCTATAAATTG
TGGGAAGGATCTTGGGAGAACGATGCAGTATTGCGTGATAAAGAAAAGGGTATTTTTGCCGATCATCGCAAGGTCCATCC
AATTGATCATCAAGGAAAATACTTTACAGTACCGGGTATTCATATTTGTGAGCCGTCGCCACAACGTACACCTGTACTTT
ATCAAGCAGGCGCATCTACGCGCGGACAAAAATTTGCAAGCCAGAATGCCGAATGCGTGTTTATTGCAGCGCCTTCAAAA
GTTGCAGCAAAGAAAGTTGTACAAGGTATTCGAAAAAAATTGATTGAAGAAGGGCGTGATCCTTACTCGGTCAAAATTTA
TACCTTACTTTCTATTGTTACAGATGAAACAGACCTTAAGGCTCATGAAAAGTTTAAAGAATATCAGTCTTATGGTAGTT
ATGATGGTGCATTGACCTTGCTCTCAGGCTGGTCTGGTGTCGATTTTTCACAATATCAACCAGCCGATAAGGTAGAGTAT
ATTCATACCAATGCGATTCAGTCGTTGCTGGATTCTTATGTAAATGCTGATCCTGATCGAGTTTGGACCATTGAGGAAAT
TGCAAATTGGAATAGTCTTGGAGGTAATGGCCCAGTTGTTGTTGGTTCAGCCAGCACCGTTGCAGATCATTTGCAGCAAT
GGATTGAAGATACCGATATTGATGGTTTTAATTTGGCCTATATTTTAGCGCATCAAAGTTTTATTGATGTTGTTGATTAT
ATTGTTCCTGAATTACAAAAACGTGGTGTATATAAAACTGAATATCGTGAGGGAACTTTACGCGAAAAATTATTTGGAAA
TAGTGCACATTTACCCAATAACCATAAAGGGGCTTCTTATCGCTATAATCATTCAATCCAATTTTCTCATGCAGTTTAA

Upstream 100 bases:

>100_bases
TTATGATAAAAAAGTGATAAAAAATAATTTAAGATGAAATCAAGTTGTTTAATTTAAAAAATCAATTATGTCTAAGCAAA
TTAGTTTTAATGCATTTGAA

Downstream 100 bases:

>100_bases
CGAATGATTAATTAAATAAAAACAAGGACGTTAAATTTAATTATAGAAAATGATTAAATCATAAAAATGAATTTATTATA
AATTTTTAATTATTTTATTT

Product: coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MNCIAHQSPGLWRHPQDRSTQYKDIEYWTDLSKILEKGLFDGIFIADVLGIYDVYHNSAEHALTGAVQVPVNDPLQIIPA
MAAVTKHLGFGLTTSISFEHPYPFARRISTLDHLTKGRVGWNIVTSYLESGSKNLGLKTQVNHDNRYDIADEYLEVLYKL
WEGSWENDAVLRDKEKGIFADHRKVHPIDHQGKYFTVPGIHICEPSPQRTPVLYQAGASTRGQKFASQNAECVFIAAPSK
VAAKKVVQGIRKKLIEEGRDPYSVKIYTLLSIVTDETDLKAHEKFKEYQSYGSYDGALTLLSGWSGVDFSQYQPADKVEY
IHTNAIQSLLDSYVNADPDRVWTIEEIANWNSLGGNGPVVVGSASTVADHLQQWIEDTDIDGFNLAYILAHQSFIDVVDY
IVPELQKRGVYKTEYREGTLREKLFGNSAHLPNNHKGASYRYNHSIQFSHAV

Sequences:

>Translated_452_residues
MNCIAHQSPGLWRHPQDRSTQYKDIEYWTDLSKILEKGLFDGIFIADVLGIYDVYHNSAEHALTGAVQVPVNDPLQIIPA
MAAVTKHLGFGLTTSISFEHPYPFARRISTLDHLTKGRVGWNIVTSYLESGSKNLGLKTQVNHDNRYDIADEYLEVLYKL
WEGSWENDAVLRDKEKGIFADHRKVHPIDHQGKYFTVPGIHICEPSPQRTPVLYQAGASTRGQKFASQNAECVFIAAPSK
VAAKKVVQGIRKKLIEEGRDPYSVKIYTLLSIVTDETDLKAHEKFKEYQSYGSYDGALTLLSGWSGVDFSQYQPADKVEY
IHTNAIQSLLDSYVNADPDRVWTIEEIANWNSLGGNGPVVVGSASTVADHLQQWIEDTDIDGFNLAYILAHQSFIDVVDY
IVPELQKRGVYKTEYREGTLREKLFGNSAHLPNNHKGASYRYNHSIQFSHAV
>Mature_452_residues
MNCIAHQSPGLWRHPQDRSTQYKDIEYWTDLSKILEKGLFDGIFIADVLGIYDVYHNSAEHALTGAVQVPVNDPLQIIPA
MAAVTKHLGFGLTTSISFEHPYPFARRISTLDHLTKGRVGWNIVTSYLESGSKNLGLKTQVNHDNRYDIADEYLEVLYKL
WEGSWENDAVLRDKEKGIFADHRKVHPIDHQGKYFTVPGIHICEPSPQRTPVLYQAGASTRGQKFASQNAECVFIAAPSK
VAAKKVVQGIRKKLIEEGRDPYSVKIYTLLSIVTDETDLKAHEKFKEYQSYGSYDGALTLLSGWSGVDFSQYQPADKVEY
IHTNAIQSLLDSYVNADPDRVWTIEEIANWNSLGGNGPVVVGSASTVADHLQQWIEDTDIDGFNLAYILAHQSFIDVVDY
IVPELQKRGVYKTEYREGTLREKLFGNSAHLPNNHKGASYRYNHSIQFSHAV

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=275, Percent_Identity=25.8181818181818, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 50933; Mature: 50933

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCIAHQSPGLWRHPQDRSTQYKDIEYWTDLSKILEKGLFDGIFIADVLGIYDVYHNSAE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH
HALTGAVQVPVNDPLQIIPAMAAVTKHLGFGLTTSISFEHPYPFARRISTLDHLTKGRVG
HHEECEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCH
WNIVTSYLESGSKNLGLKTQVNHDNRYDIADEYLEVLYKLWEGSWENDAVLRDKEKGIFA
HHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
DHRKVHPIDHQGKYFTVPGIHICEPSPQRTPVLYQAGASTRGQKFASQNAECVFIAAPSK
CCCCCCCCCCCCCEEECCCEEEECCCCCCCCEEEECCCCCCCHHHHCCCCCEEEEECCHH
VAAKKVVQGIRKKLIEEGRDPYSVKIYTLLSIVTDETDLKAHEKFKEYQSYGSYDGALTL
HHHHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEE
LSGWSGVDFSQYQPADKVEYIHTNAIQSLLDSYVNADPDRVWTIEEIANWNSLGGNGPVV
ECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCCCCEE
VGSASTVADHLQQWIEDTDIDGFNLAYILAHQSFIDVVDYIVPELQKRGVYKTEYREGTL
EECHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHCCCHH
REKLFGNSAHLPNNHKGASYRYNHSIQFSHAV
HHHHCCCCCCCCCCCCCCCEEECCEEEEECCC
>Mature Secondary Structure
MNCIAHQSPGLWRHPQDRSTQYKDIEYWTDLSKILEKGLFDGIFIADVLGIYDVYHNSAE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH
HALTGAVQVPVNDPLQIIPAMAAVTKHLGFGLTTSISFEHPYPFARRISTLDHLTKGRVG
HHEECEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCH
WNIVTSYLESGSKNLGLKTQVNHDNRYDIADEYLEVLYKLWEGSWENDAVLRDKEKGIFA
HHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
DHRKVHPIDHQGKYFTVPGIHICEPSPQRTPVLYQAGASTRGQKFASQNAECVFIAAPSK
CCCCCCCCCCCCCEEECCCEEEECCCCCCCCEEEECCCCCCCHHHHCCCCCEEEEECCHH
VAAKKVVQGIRKKLIEEGRDPYSVKIYTLLSIVTDETDLKAHEKFKEYQSYGSYDGALTL
HHHHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEE
LSGWSGVDFSQYQPADKVEYIHTNAIQSLLDSYVNADPDRVWTIEEIANWNSLGGNGPVV
ECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCCCCEE
VGSASTVADHLQQWIEDTDIDGFNLAYILAHQSFIDVVDYIVPELQKRGVYKTEYREGTL
EECHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHCCCHH
REKLFGNSAHLPNNHKGASYRYNHSIQFSHAV
HHHHCCCCCCCCCCCCCCCEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]