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The map label for this gene is ybgL [C]

Identifier: 50085599

GI number: 50085599

Start: 2476637

End: 2477401

Strand: Reverse

Name: ybgL [C]

Synonym: ACIAD2520

Alternate gene names: 50085599

Gene position: 2477401-2476637 (Counterclockwise)

Preceding gene: 50085600

Following gene: 50085598

Centisome position: 68.84

GC content: 45.23

Gene sequence:

>765_bases
ATGCGTATCGACTTAAACAGTGATTTGGGTGAAAGCTATGGGTCATGGATAATGGGAAATGATGAGCAGATTTTACCCAT
GGTCAGCAGTGCCAATATTGCCTGTGGCTTTCATGCAGGTGATCCGCTTGGGATTTTTAAAACCTTAAAGCAAGCTGCTA
AACTGGGTGTAACCGTTGGTGCACATGTCTCCTATCCAGATTTGGCTGGATTTGGTCGCCGTAATATGCAGCTTTCATAT
GATGAATTACTTACCGATGTAATGTATCAAATTTCTGCATTACAGGGTTTAGCCAAAGCTGCGGGAACAACGGTCAAATA
CGTTAAGCCTCATGGCGCGCTTTACAATACCATTGCCACTGATTTGCAACAGGCTCAGGCAGTGCTTGATGCAATCAAAT
GCCTTGATTCAGATTTGATATTGGTGGGGTTAGCGGGTTCTCCACTCATCACTTTTGCACAGCAAAATGGACTAAATGTA
GTGGCTGAAGCTTTTGCAGATCGCGCCTACAATGCAGATGGTTCTTTAGTCTCACGACGCTTGGCAGGAGCGGTGCTGCA
TGATCCAGATTTTGTGGCAAAGCGTGTGGTGAAGATGATTCAGGAGGGCGGCGTGATTTCAATTGATGGTCATTTTACCC
CAATATCTGCACAAAGTATTTGCTTGCATGGTGATACGGACGGCGCGTTAAGCATGGCAGCAGCCATTCGAAATGCTTTG
CTTACCGAAGGCATTGAAATCCGATCATTCTGTGAGGTGAATTAA

Upstream 100 bases:

>100_bases
CGTTTTAGGGGTACTGACGTGTTTACTTACATGGTATATGGGGTATGTCTCTTTTAATACGATTTTCAACTATCTCAAAA
CGTTATAAGGACGAAATAAC

Downstream 100 bases:

>100_bases
ATGAATACATCCATTTTGGCACCCCCAGAATCTTTACTTGAGGCGCAGAAGGTACGGCTAGCAATCCGTGAAGGTTATGA
TCGACCTACGGCTGGCATGG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MRIDLNSDLGESYGSWIMGNDEQILPMVSSANIACGFHAGDPLGIFKTLKQAAKLGVTVGAHVSYPDLAGFGRRNMQLSY
DELLTDVMYQISALQGLAKAAGTTVKYVKPHGALYNTIATDLQQAQAVLDAIKCLDSDLILVGLAGSPLITFAQQNGLNV
VAEAFADRAYNADGSLVSRRLAGAVLHDPDFVAKRVVKMIQEGGVISIDGHFTPISAQSICLHGDTDGALSMAAAIRNAL
LTEGIEIRSFCEVN

Sequences:

>Translated_254_residues
MRIDLNSDLGESYGSWIMGNDEQILPMVSSANIACGFHAGDPLGIFKTLKQAAKLGVTVGAHVSYPDLAGFGRRNMQLSY
DELLTDVMYQISALQGLAKAAGTTVKYVKPHGALYNTIATDLQQAQAVLDAIKCLDSDLILVGLAGSPLITFAQQNGLNV
VAEAFADRAYNADGSLVSRRLAGAVLHDPDFVAKRVVKMIQEGGVISIDGHFTPISAQSICLHGDTDGALSMAAAIRNAL
LTEGIEIRSFCEVN
>Mature_254_residues
MRIDLNSDLGESYGSWIMGNDEQILPMVSSANIACGFHAGDPLGIFKTLKQAAKLGVTVGAHVSYPDLAGFGRRNMQLSY
DELLTDVMYQISALQGLAKAAGTTVKYVKPHGALYNTIATDLQQAQAVLDAIKCLDSDLILVGLAGSPLITFAQQNGLNV
VAEAFADRAYNADGSLVSRRLAGAVLHDPDFVAKRVVKMIQEGGVISIDGHFTPISAQSICLHGDTDGALSMAAAIRNAL
LTEGIEIRSFCEVN

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=245, Percent_Identity=46.530612244898, Blast_Score=218, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2520_ACIAD (Q6F9H7)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_047109.1
- ProteinModelPortal:   Q6F9H7
- SMR:   Q6F9H7
- STRING:   Q6F9H7
- GeneID:   2880535
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD2520
- NMPDR:   fig|62977.3.peg.2118
- eggNOG:   COG1540
- HOGENOM:   HBG482818
- OMA:   GRRSMAC
- PhylomeDB:   Q6F9H7
- ProtClustDB:   PRK05406
- BioCyc:   ASP62977:ACIAD2520-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26926; Mature: 26926

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDLNSDLGESYGSWIMGNDEQILPMVSSANIACGFHAGDPLGIFKTLKQAAKLGVTVG
CEECCCCCHHHHHCCCEECCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCEEC
AHVSYPDLAGFGRRNMQLSYDELLTDVMYQISALQGLAKAAGTTVKYVKPHGALYNTIAT
CCCCCCCHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHH
DLQQAQAVLDAIKCLDSDLILVGLAGSPLITFAQQNGLNVVAEAFADRAYNADGSLVSRR
HHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHH
LAGAVLHDPDFVAKRVVKMIQEGGVISIDGHFTPISAQSICLHGDTDGALSMAAAIRNAL
HHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH
LTEGIEIRSFCEVN
HHCCCCHHHEECCC
>Mature Secondary Structure
MRIDLNSDLGESYGSWIMGNDEQILPMVSSANIACGFHAGDPLGIFKTLKQAAKLGVTVG
CEECCCCCHHHHHCCCEECCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCEEC
AHVSYPDLAGFGRRNMQLSYDELLTDVMYQISALQGLAKAAGTTVKYVKPHGALYNTIAT
CCCCCCCHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHH
DLQQAQAVLDAIKCLDSDLILVGLAGSPLITFAQQNGLNVVAEAFADRAYNADGSLVSRR
HHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHH
LAGAVLHDPDFVAKRVVKMIQEGGVISIDGHFTPISAQSICLHGDTDGALSMAAAIRNAL
HHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH
LTEGIEIRSFCEVN
HHCCCCHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA