Click here to switch to the map view.

The map label for this gene is ycsG [H]

Identifier: 50085600

GI number: 50085600

Start: 2477414

End: 2478640

Strand: Reverse

Name: ycsG [H]

Synonym: ACIAD2521

Alternate gene names: 50085600

Gene position: 2478640-2477414 (Counterclockwise)

Preceding gene: 50085601

Following gene: 50085599

Centisome position: 68.88

GC content: 43.36

Gene sequence:

>1227_bases
ATGGAAAAAAAATCTTTTTTTAGTGAACGGCAATGGGCGATTGTTGCTTCGATTTTTTTAATGGCAACGTCAGCCATGGG
GCCAGGGTTTCTTACCCAAACAGCAACCTTTACTGTAAAAATGGGTGCTGCTTTCGGTTTTGGAATTTTACTCTCAATCA
TCATTGATTATGTGGTGCAGCAGAATATCTGGCGTGTCGTGACGCTGACACAAAAGTGCGCGCCAGATGTAGCCAATTTA
GCATTGCCAGGTAGTGGTTATGTACTGGCCGTTTTGGTGATTTTTGGCGGCTTCTTTTTTAATATTGGAAACATCGCCGG
TGCAGCGTTGGGATTAAATGCTTTATTTGGACTAGATACCAAGTGGGGAGGTGTGATTAGTGGTGCTTTAGCCATTCTGA
TTTTTGCGTCGCGTAAAGCCAGTCTGGTTGTAGACAAAAGCATGATTATTCTGGGTATTTTAAAAATTGCAATTATTGTG
ATTGTCGCGTTTATTGTCGCACCACCAATGGCGGATGCCTTTCATCAAACCATTCTGCCCAGTCATATCGATTTTGCCAG
TATTACCACCATTGTAGGGGGAACAGTGGGTGGATATATCTGCTATGCCGGTGCGCACCGTTTACTCGATAAAGGGACAG
TGGGGCCTGAACATATTGACGAAGTTGCCCGTGCTGCCACCAAAGGCATTGTGGTGGTGGGTATTATGCGTTATGTCCTG
TTTTTGGCGATTTTGGGTGTAGTCGTCAGTGGTGCAACAATTGATCTGGCTTCACATAATGCCAATCCAGCCGCACAGGC
ATTTCAGTATGCGGCAGGTGAGTTTGGATTTAAACTTTTTGGTTTGATCTTCTGGGCTGCGGGTATCAGTAGCTCAATTG
GTGCTGCCTATACCTCAGTATCATTCTTTACAGTATTTAAAAAAGATCTCAATCTGAAGCAACGTAATGTATGTACCATT
ATTTTTATTGCACTGGCACTTCTCATTTATGTACTGATTGGTGCAACGCCAGCCAGCCTGTTGGTGTTCGTTGGGGGCTT
AAACGGTTTGGTATTACCGATTGGTCTCACCTTATTTGTATATGTGGCAGCGTGTCGTAAAGATCTGCTGGGAGGCTATC
ACTATCCAATCTGGTTAACCGTTTTAGGGGTACTGACGTGTTTACTTACATGGTATATGGGGTATGTCTCTTTTAATACG
ATTTTCAACTATCTCAAAACGTTATAA

Upstream 100 bases:

>100_bases
AATTAAATAAAAGCCACAAGCTGTATCACAGCTTAAAACTGCTTCTACTTTAGGTCAGAGAGCTTCTGGTTTCAGGCACA
GCAAAGAGCGAACATATTCT

Downstream 100 bases:

>100_bases
GGACGAAATAACATGCGTATCGACTTAAACAGTGATTTGGGTGAAAGCTATGGGTCATGGATAATGGGAAATGATGAGCA
GATTTTACCCATGGTCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MEKKSFFSERQWAIVASIFLMATSAMGPGFLTQTATFTVKMGAAFGFGILLSIIIDYVVQQNIWRVVTLTQKCAPDVANL
ALPGSGYVLAVLVIFGGFFFNIGNIAGAALGLNALFGLDTKWGGVISGALAILIFASRKASLVVDKSMIILGILKIAIIV
IVAFIVAPPMADAFHQTILPSHIDFASITTIVGGTVGGYICYAGAHRLLDKGTVGPEHIDEVARAATKGIVVVGIMRYVL
FLAILGVVVSGATIDLASHNANPAAQAFQYAAGEFGFKLFGLIFWAAGISSSIGAAYTSVSFFTVFKKDLNLKQRNVCTI
IFIALALLIYVLIGATPASLLVFVGGLNGLVLPIGLTLFVYVAACRKDLLGGYHYPIWLTVLGVLTCLLTWYMGYVSFNT
IFNYLKTL

Sequences:

>Translated_408_residues
MEKKSFFSERQWAIVASIFLMATSAMGPGFLTQTATFTVKMGAAFGFGILLSIIIDYVVQQNIWRVVTLTQKCAPDVANL
ALPGSGYVLAVLVIFGGFFFNIGNIAGAALGLNALFGLDTKWGGVISGALAILIFASRKASLVVDKSMIILGILKIAIIV
IVAFIVAPPMADAFHQTILPSHIDFASITTIVGGTVGGYICYAGAHRLLDKGTVGPEHIDEVARAATKGIVVVGIMRYVL
FLAILGVVVSGATIDLASHNANPAAQAFQYAAGEFGFKLFGLIFWAAGISSSIGAAYTSVSFFTVFKKDLNLKQRNVCTI
IFIALALLIYVLIGATPASLLVFVGGLNGLVLPIGLTLFVYVAACRKDLLGGYHYPIWLTVLGVLTCLLTWYMGYVSFNT
IFNYLKTL
>Mature_408_residues
MEKKSFFSERQWAIVASIFLMATSAMGPGFLTQTATFTVKMGAAFGFGILLSIIIDYVVQQNIWRVVTLTQKCAPDVANL
ALPGSGYVLAVLVIFGGFFFNIGNIAGAALGLNALFGLDTKWGGVISGALAILIFASRKASLVVDKSMIILGILKIAIIV
IVAFIVAPPMADAFHQTILPSHIDFASITTIVGGTVGGYICYAGAHRLLDKGTVGPEHIDEVARAATKGIVVVGIMRYVL
FLAILGVVVSGATIDLASHNANPAAQAFQYAAGEFGFKLFGLIFWAAGISSSIGAAYTSVSFFTVFKKDLNLKQRNVCTI
IFIALALLIYVLIGATPASLLVFVGGLNGLVLPIGLTLFVYVAACRKDLLGGYHYPIWLTVLGVLTCLLTWYMGYVSFNT
IFNYLKTL

Specific function: Unknown

COG id: COG1914

COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NRAMP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001046 [H]

Pfam domain/function: PF01566 Nramp [H]

EC number: NA

Molecular weight: Translated: 43425; Mature: 43425

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKSFFSERQWAIVASIFLMATSAMGPGFLTQTATFTVKMGAAFGFGILLSIIIDYVVQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECHHHHHHHHHHHHHHHHHH
QNIWRVVTLTQKCAPDVANLALPGSGYVLAVLVIFGGFFFNIGNIAGAALGLNALFGLDT
HHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KWGGVISGALAILIFASRKASLVVDKSMIILGILKIAIIVIVAFIVAPPMADAFHQTILP
CCHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
SHIDFASITTIVGGTVGGYICYAGAHRLLDKGTVGPEHIDEVARAATKGIVVVGIMRYVL
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
FLAILGVVVSGATIDLASHNANPAAQAFQYAAGEFGFKLFGLIFWAAGISSSIGAAYTSV
HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SFFTVFKKDLNLKQRNVCTIIFIALALLIYVLIGATPASLLVFVGGLNGLVLPIGLTLFV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
YVAACRKDLLGGYHYPIWLTVLGVLTCLLTWYMGYVSFNTIFNYLKTL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKKSFFSERQWAIVASIFLMATSAMGPGFLTQTATFTVKMGAAFGFGILLSIIIDYVVQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECHHHHHHHHHHHHHHHHHH
QNIWRVVTLTQKCAPDVANLALPGSGYVLAVLVIFGGFFFNIGNIAGAALGLNALFGLDT
HHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KWGGVISGALAILIFASRKASLVVDKSMIILGILKIAIIVIVAFIVAPPMADAFHQTILP
CCHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
SHIDFASITTIVGGTVGGYICYAGAHRLLDKGTVGPEHIDEVARAATKGIVVVGIMRYVL
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
FLAILGVVVSGATIDLASHNANPAAQAFQYAAGEFGFKLFGLIFWAAGISSSIGAAYTSV
HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SFFTVFKKDLNLKQRNVCTIIFIALALLIYVLIGATPASLLVFVGGLNGLVLPIGLTLFV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH
YVAACRKDLLGGYHYPIWLTVLGVLTCLLTWYMGYVSFNTIFNYLKTL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 8969502 [H]