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The map label for this gene is cyoC [H]

Identifier: 50085512

GI number: 50085512

Start: 2394521

End: 2395141

Strand: Direct

Name: cyoC [H]

Synonym: ACIAD2427

Alternate gene names: 50085512

Gene position: 2394521-2395141 (Clockwise)

Preceding gene: 50085511

Following gene: 50085513

Centisome position: 66.54

GC content: 39.61

Gene sequence:

>621_bases
ATGGCTGAAGTACTTCATCACGACAACCACGGACACGATGGTCATCATGAACATGATGATACCGATTTAACAGTCTTTGG
TTTCTGGACTTACTTGATGAGTGACTTGATTTTATTCGGTACACTCTTCATCGCGTTCGCTGTATTAAGCAGTCATGTTC
CACCAGGTACTCCAACTGCACATGATTTGTTCAGTGAATCATTAGGTTTTGTTTTAACAGAAACTTTTGCGCTCTTGATC
TCTTCTGTGACTTTCGGTTTTGCAGTTCTGGCTTCATACAAGAAAAATGTTAACCAAGTAATTATGTGGCTTTTTATCAC
ATTTGTTTTTGGTGCAACATTCATTGGTATGGAACTTTATGAATTCCATCATTTAGTTCATTCAGGGCATGGACCTGGTA
CGAGTGCATTTTTATCTGCATTCTTTACTTTGGTTGGGACACACGGTATCCACGTAACTTCTGGTTTGGTCTGGATGCTT
GTTTTGATATATCAAATCAAAACTAAAGGTCTAACCTTACCAACCACACGTCGTCTAGCTTGTCTAAGCTTGTTCTGGCA
CTTCCTTGACATCGTATGGATCTGTGTATTCAGCGTCGTATACTTAATGGGAGTTCTCTAA

Upstream 100 bases:

>100_bases
ACAAAAGAAGTGGATTACTATGTACCAGCAGCAGAAGTTGAGCGCATTGAAAATGAACGCTATGCGTTACTTGAAAAACA
CTTGAAGAAGGACTAAGGAT

Downstream 100 bases:

>100_bases
TGAGTCATGATCATAATTCTGCTGGCGCATCACATGGTAACTTCAAGCAGTATACGATTGGTTTCATTTTATCAGTCGTA
TTAACTATCATTCCTTTTGG

Product: cytochrome o ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III; Ubiquinol oxidase chain C [H]

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MAEVLHHDNHGHDGHHEHDDTDLTVFGFWTYLMSDLILFGTLFIAFAVLSSHVPPGTPTAHDLFSESLGFVLTETFALLI
SSVTFGFAVLASYKKNVNQVIMWLFITFVFGATFIGMELYEFHHLVHSGHGPGTSAFLSAFFTLVGTHGIHVTSGLVWML
VLIYQIKTKGLTLPTTRRLACLSLFWHFLDIVWICVFSVVYLMGVL

Sequences:

>Translated_206_residues
MAEVLHHDNHGHDGHHEHDDTDLTVFGFWTYLMSDLILFGTLFIAFAVLSSHVPPGTPTAHDLFSESLGFVLTETFALLI
SSVTFGFAVLASYKKNVNQVIMWLFITFVFGATFIGMELYEFHHLVHSGHGPGTSAFLSAFFTLVGTHGIHVTSGLVWML
VLIYQIKTKGLTLPTTRRLACLSLFWHFLDIVWICVFSVVYLMGVL
>Mature_205_residues
AEVLHHDNHGHDGHHEHDDTDLTVFGFWTYLMSDLILFGTLFIAFAVLSSHVPPGTPTAHDLFSESLGFVLTETFALLIS
SVTFGFAVLASYKKNVNQVIMWLFITFVFGATFIGMELYEFHHLVHSGHGPGTSAFLSAFFTLVGTHGIHVTSGLVWMLV
LIYQIKTKGLTLPTTRRLACLSLFWHFLDIVWICVFSVVYLMGVL

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=201, Percent_Identity=59.7014925373134, Blast_Score=231, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 23049; Mature: 22918

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVLHHDNHGHDGHHEHDDTDLTVFGFWTYLMSDLILFGTLFIAFAVLSSHVPPGTPTA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
HDLFSESLGFVLTETFALLISSVTFGFAVLASYKKNVNQVIMWLFITFVFGATFIGMELY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFHHLVHSGHGPGTSAFLSAFFTLVGTHGIHVTSGLVWMLVLIYQIKTKGLTLPTTRRLA
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
CLSLFWHFLDIVWICVFSVVYLMGVL
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AEVLHHDNHGHDGHHEHDDTDLTVFGFWTYLMSDLILFGTLFIAFAVLSSHVPPGTPTA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
HDLFSESLGFVLTETFALLISSVTFGFAVLASYKKNVNQVIMWLFITFVFGATFIGMELY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFHHLVHSGHGPGTSAFLSAFFTLVGTHGIHVTSGLVWMLVLIYQIKTKGLTLPTTRRLA
HHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
CLSLFWHFLDIVWICVFSVVYLMGVL
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]