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The map label for this gene is cyoA [H]

Identifier: 50085510

GI number: 50085510

Start: 2391463

End: 2392524

Strand: Direct

Name: cyoA [H]

Synonym: ACIAD2425

Alternate gene names: 50085510

Gene position: 2391463-2392524 (Clockwise)

Preceding gene: 50085509

Following gene: 50085511

Centisome position: 66.45

GC content: 40.68

Gene sequence:

>1062_bases
ATGAGACAAACGATTTTAGCTGTATTGTCTTTATCTACGATTGCTGCACTCTTAACTGGGTGTGGTGGTGATATGGTACT
TCTAAACTCAAAAGGTCCAGTAGGTCAAGGTCAAAGTAACTTGATGATGACTGCGATCTACCTTATGTTATTGGTGGTCA
TTCCATCAGTAATCATGGCATTATGGTTTAGTTGGAAATATCGCGCGTCGAATAAAGATGCAGACTATAAACCTACATGG
GCGCACTCTACTGCAATTGAAATTGTAGTTTGGGGTGTCCCTGTCATTATTATTGGTATTCTAGCTTGGTTAACTTGGTG
GGGCTCCCACAAGTACGACCCTTACCGTCCTTTAGAATCAGATAAAGCACCTTTAACTATTCAGGTTATTGCTGAACAGT
TTAAATGGATTTTTGTCTATCCTGAACAAAACATCGCAACGGTAAATGAAGTACGCTTCCCAGAAAAAACCCCGTTAAGC
TTTAAGATCACTTCTAACTTTACAATGAACTCTTTTTTCATTCCACAGTTAGGCGGTCAGATCTATGCGATGGCTGGCAT
GCAAACTCACTTACACTTAATGGCAGATCAGCCAGGTGTTTTCCGTGGCATGTCATCTAACTATTCAGGTTATGGTTTCT
CACAAATGCATTTTAAAGCATATAGTGTGACTGAAGCTGAATTTACACAATGGGTAGATGCAGTTAAAGCAGGTAAAGGT
ACTGGTGTTAATCCTGAAGCAATTCAGAAAGGTATACTTGATCAAGCTGAACTTGCAACGCTTAAAGACGGTGATCGTTC
TAAGCATCAAATTGAAGCGCTTGTACATCGTGCACAAGCTGCAGGTGATGCAGAAGCCTTAGCGAAAGCTGAAGCAATGA
AACCGTTCCCGAATAAGCCACATCCTGTGACTTACTATTCTTCAGTTGAACCAAAATTGTTTGAAACTGTCATTAACAGA
TATATGAGCAACTATCACGGAGCTGATCATTCAGCTACTGCTGAACATGGTTCACAAGCTCATGCTGCTAATGCACATGC
AACTGCTTCTGTAGAGGAATAA

Upstream 100 bases:

>100_bases
CTTTCTATATTCAATAGAAAAGATTCTTCTCCATCATGCGACACTTTTATCGCTATCCCGAATTTTATGAGGGAATGGGA
CTCTTCACCGAGGTTGTAAA

Downstream 100 bases:

>100_bases
GCCATGTTGTTATTAGGTAAACTCGGATGGGACTCAATCCCTAAAGAGCCAATTGTACTAGTGACAATGGTCTTAATGGC
TATTGGTGCAATTGCAGTTC

Product: cytochrome o ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MRQTILAVLSLSTIAALLTGCGGDMVLLNSKGPVGQGQSNLMMTAIYLMLLVVIPSVIMALWFSWKYRASNKDADYKPTW
AHSTAIEIVVWGVPVIIIGILAWLTWWGSHKYDPYRPLESDKAPLTIQVIAEQFKWIFVYPEQNIATVNEVRFPEKTPLS
FKITSNFTMNSFFIPQLGGQIYAMAGMQTHLHLMADQPGVFRGMSSNYSGYGFSQMHFKAYSVTEAEFTQWVDAVKAGKG
TGVNPEAIQKGILDQAELATLKDGDRSKHQIEALVHRAQAAGDAEALAKAEAMKPFPNKPHPVTYYSSVEPKLFETVINR
YMSNYHGADHSATAEHGSQAHAANAHATASVEE

Sequences:

>Translated_353_residues
MRQTILAVLSLSTIAALLTGCGGDMVLLNSKGPVGQGQSNLMMTAIYLMLLVVIPSVIMALWFSWKYRASNKDADYKPTW
AHSTAIEIVVWGVPVIIIGILAWLTWWGSHKYDPYRPLESDKAPLTIQVIAEQFKWIFVYPEQNIATVNEVRFPEKTPLS
FKITSNFTMNSFFIPQLGGQIYAMAGMQTHLHLMADQPGVFRGMSSNYSGYGFSQMHFKAYSVTEAEFTQWVDAVKAGKG
TGVNPEAIQKGILDQAELATLKDGDRSKHQIEALVHRAQAAGDAEALAKAEAMKPFPNKPHPVTYYSSVEPKLFETVINR
YMSNYHGADHSATAEHGSQAHAANAHATASVEE
>Mature_353_residues
MRQTILAVLSLSTIAALLTGCGGDMVLLNSKGPVGQGQSNLMMTAIYLMLLVVIPSVIMALWFSWKYRASNKDADYKPTW
AHSTAIEIVVWGVPVIIIGILAWLTWWGSHKYDPYRPLESDKAPLTIQVIAEQFKWIFVYPEQNIATVNEVRFPEKTPLS
FKITSNFTMNSFFIPQLGGQIYAMAGMQTHLHLMADQPGVFRGMSSNYSGYGFSQMHFKAYSVTEAEFTQWVDAVKAGKG
TGVNPEAIQKGILDQAELATLKDGDRSKHQIEALVHRAQAAGDAEALAKAEAMKPFPNKPHPVTYYSSVEPKLFETVINR
YMSNYHGADHSATAEHGSQAHAANAHATASVEE

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=353, Percent_Identity=43.6260623229462, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 38956; Mature: 38956

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQTILAVLSLSTIAALLTGCGGDMVLLNSKGPVGQGQSNLMMTAIYLMLLVVIPSVIMA
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LWFSWKYRASNKDADYKPTWAHSTAIEIVVWGVPVIIIGILAWLTWWGSHKYDPYRPLES
HHHCCEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DKAPLTIQVIAEQFKWIFVYPEQNIATVNEVRFPEKTPLSFKITSNFTMNSFFIPQLGGQ
CCCCEEHEEEHHHCCEEEEECCCCCCCHHHCCCCCCCCEEEEEECCCEECEEECCCCCCE
IYAMAGMQTHLHLMADQPGVFRGMSSNYSGYGFSQMHFKAYSVTEAEFTQWVDAVKAGKG
EEEEECCCEEEEEEECCCCCEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCC
TGVNPEAIQKGILDQAELATLKDGDRSKHQIEALVHRAQAAGDAEALAKAEAMKPFPNKP
CCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
HPVTYYSSVEPKLFETVINRYMSNYHGADHSATAEHGSQAHAANAHATASVEE
CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRQTILAVLSLSTIAALLTGCGGDMVLLNSKGPVGQGQSNLMMTAIYLMLLVVIPSVIMA
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LWFSWKYRASNKDADYKPTWAHSTAIEIVVWGVPVIIIGILAWLTWWGSHKYDPYRPLES
HHHCCEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DKAPLTIQVIAEQFKWIFVYPEQNIATVNEVRFPEKTPLSFKITSNFTMNSFFIPQLGGQ
CCCCEEHEEEHHHCCEEEEECCCCCCCHHHCCCCCCCCEEEEEECCCEECEEECCCCCCE
IYAMAGMQTHLHLMADQPGVFRGMSSNYSGYGFSQMHFKAYSVTEAEFTQWVDAVKAGKG
EEEEECCCEEEEEEECCCCCEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCC
TGVNPEAIQKGILDQAELATLKDGDRSKHQIEALVHRAQAAGDAEALAKAEAMKPFPNKP
CCCCHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
HPVTYYSSVEPKLFETVINRYMSNYHGADHSATAEHGSQAHAANAHATASVEE
CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]