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The map label for this gene is soj [C]

Identifier: 50085457

GI number: 50085457

Start: 2325243

End: 2326025

Strand: Reverse

Name: soj [C]

Synonym: ACIAD2367

Alternate gene names: 50085457

Gene position: 2326025-2325243 (Counterclockwise)

Preceding gene: 50085458

Following gene: 50085456

Centisome position: 64.64

GC content: 41.38

Gene sequence:

>783_bases
ATGGCTCAGATTATTGCAATTGCAAACCAGAAAGGTGGCGTAGGTAAAACGACGACAGCTGTGAATCTGGCTGCCTCTTT
AGCTGTATTGAAAAAGCGTGTGTTATTGGTGGATATGGATTCTCAAGGGAATGCCACCATGGGTTCTGGCATTCAGAAAA
ATGATCTACTTTATTCTGTTACAGATGTTTTATTGGGGGAGGTTCCCATTGAAACAGCGATTACCAAAGCTGAAGTCGGT
TACAAGGTTTTAGGTTCTAACCGTGATCTCGCAGGCGTAGAATTGGCGATTGCCGATCAGGATGGACGAGAGTTTATTTT
AAAAAAGGCTTTGGCTCAGGTTCGTGATAACTTTGATTATATCATCATTGATTGTGCACCAAGTTTAAGTTTGATCACTG
TCAATGCATTGGCTGCAGTAGATGGTGTGATGATTCCAATGCAATGCGAATATTATGCACTTGAAGGATTGGCTGATCTA
ACTCAGACGATTGATCGAATTCAGCAGGCACTTAATCCAGATTTGCGGATTATTGGTGTGTTGCGTACCATGTATGATGC
GCGTAATGCATTGACACGTGATGTTTCGGCGGAGTTAGAGCAATTTTTTGGTAAAAAGCTTTATGATACTGTGATACCAC
GTAATGTACGTTTGGCAGAAGCACCTGCACACGGTTTACCCATTATCTATTTTGAGAAAAGCTCAAAGGGTGCAGTGGCT
TACTTAAATCTGGCTGCCGAAATGTTGAAGAAAAGTAAAGTGAAAAAAGGAACCAATACATGA

Upstream 100 bases:

>100_bases
GAATTTTCTTGTCAGGTCATTGGATTGCAAGTTCCGCGTTTGGATGAGCAGCGTCATTTGCTTTTACTTCAACAAATAAA
AAATTAAGTTTGGGGTTATC

Downstream 100 bases:

>100_bases
CCATAAAAAAACGAGGACTTGCAAAAGGTCGTGGTTTGGATGCATTACTTGGTTCAATTCAGAAAGAAAAACTACAACTT
GAAGCACAAGCAATCGATCA

Product: chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MAQIIAIANQKGGVGKTTTAVNLAASLAVLKKRVLLVDMDSQGNATMGSGIQKNDLLYSVTDVLLGEVPIETAITKAEVG
YKVLGSNRDLAGVELAIADQDGREFILKKALAQVRDNFDYIIIDCAPSLSLITVNALAAVDGVMIPMQCEYYALEGLADL
TQTIDRIQQALNPDLRIIGVLRTMYDARNALTRDVSAELEQFFGKKLYDTVIPRNVRLAEAPAHGLPIIYFEKSSKGAVA
YLNLAAEMLKKSKVKKGTNT

Sequences:

>Translated_260_residues
MAQIIAIANQKGGVGKTTTAVNLAASLAVLKKRVLLVDMDSQGNATMGSGIQKNDLLYSVTDVLLGEVPIETAITKAEVG
YKVLGSNRDLAGVELAIADQDGREFILKKALAQVRDNFDYIIIDCAPSLSLITVNALAAVDGVMIPMQCEYYALEGLADL
TQTIDRIQQALNPDLRIIGVLRTMYDARNALTRDVSAELEQFFGKKLYDTVIPRNVRLAEAPAHGLPIIYFEKSSKGAVA
YLNLAAEMLKKSKVKKGTNT
>Mature_259_residues
AQIIAIANQKGGVGKTTTAVNLAASLAVLKKRVLLVDMDSQGNATMGSGIQKNDLLYSVTDVLLGEVPIETAITKAEVGY
KVLGSNRDLAGVELAIADQDGREFILKKALAQVRDNFDYIIIDCAPSLSLITVNALAAVDGVMIPMQCEYYALEGLADLT
QTIDRIQQALNPDLRIIGVLRTMYDARNALTRDVSAELEQFFGKKLYDTVIPRNVRLAEAPAHGLPIIYFEKSSKGAVAY
LNLAAEMLKKSKVKKGTNT

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis soj [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28103; Mature: 27972

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIIAIANQKGGVGKTTTAVNLAASLAVLKKRVLLVDMDSQGNATMGSGIQKNDLLYSV
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCHHHHH
TDVLLGEVPIETAITKAEVGYKVLGSNRDLAGVELAIADQDGREFILKKALAQVRDNFDY
HHHHHCCCCHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCE
IIIDCAPSLSLITVNALAAVDGVMIPMQCEYYALEGLADLTQTIDRIQQALNPDLRIIGV
EEEECCCCCEEEEHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LRTMYDARNALTRDVSAELEQFFGKKLYDTVIPRNVRLAEAPAHGLPIIYFEKSSKGAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCEE
YLNLAAEMLKKSKVKKGTNT
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AQIIAIANQKGGVGKTTTAVNLAASLAVLKKRVLLVDMDSQGNATMGSGIQKNDLLYSV
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCHHHHH
TDVLLGEVPIETAITKAEVGYKVLGSNRDLAGVELAIADQDGREFILKKALAQVRDNFDY
HHHHHCCCCHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCE
IIIDCAPSLSLITVNALAAVDGVMIPMQCEYYALEGLADLTQTIDRIQQALNPDLRIIGV
EEEECCCCCEEEEHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LRTMYDARNALTRDVSAELEQFFGKKLYDTVIPRNVRLAEAPAHGLPIIYFEKSSKGAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCEE
YLNLAAEMLKKSKVKKGTNT
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]