Click here to switch to the map view.

The map label for this gene is spoOJ [H]

Identifier: 50085456

GI number: 50085456

Start: 2324356

End: 2325246

Strand: Reverse

Name: spoOJ [H]

Synonym: ACIAD2366

Alternate gene names: 50085456

Gene position: 2325246-2324356 (Counterclockwise)

Preceding gene: 50085457

Following gene: 50085455

Centisome position: 64.61

GC content: 42.99

Gene sequence:

>891_bases
ATGACCATAAAAAAACGAGGACTTGCAAAAGGTCGTGGTTTGGATGCATTACTTGGTTCAATTCAGAAAGAAAAACTACA
ACTTGAAGCACAAGCAATCGATCATGGTCAGTTGAAGCAAATTGATGTCAACCTGCTAAAGCGTGGGGAATATCAGCCGC
GTCGTTTTATTCAGGAGCAGGATCTCAAAGAGCTTGCAGCTTCAATTGAAAAGCATGGTGTCATGCAGCCTATTGTGATT
CGTCCAATACAAGATGAACAGTATGCTTACGAAATTATTGCAGGTGAGCGTCGCTGGCGCGCAGCCCAGCTTGCAGGCTT
AAAAGAAGTTCCTGCGATTGTTCGTGACTTAAATGATCAGGTGGCAATTGCACTGGCATTAATTGAGAATATTCAGCGTC
AGGATTTAAATCCGATTGATCAGGCATTGGCGTTACAGCGTTTTCATGATGAATTTGGATTGAGTCATCAGGAGATTGCA
GAAACAGTAGGTAAGGCGCGTACTACTGTAAGTAACTTACTGCGTTTGTTGAGTCTTGATGATGTAATCAAGGATTTTAT
GCAGGAAGGTCAGCTCGATATGGGGCATGCCCGCGCTATTTTGGCACTCAAAGCCAAAGACCAGATTGCAATTGCTAAAG
TCGTCATTGAGAAAAATCTTTCTGTACGCCAGACCGAACAGCTTGTACGTGACTGGAATGCACCAAAACAGGAAAAACCT
AAGGCACAAGTTGCGCCTGATATCGAGCAGTTGACCCATCGTTTGTCTGAGCGTTTTGGTGCAAATGTTAAAATTGATCA
TAACAAACAAGGTAAAGGCAAGTTGGTGATTCAATACCACTCGCTAGATGAGTTGGACGGTATCCTTAATATCTGTTTGC
CAGATGTTTAG

Upstream 100 bases:

>100_bases
CCATTATCTATTTTGAGAAAAGCTCAAAGGGTGCAGTGGCTTACTTAAATCTGGCTGCCGAAATGTTGAAGAAAAGTAAA
GTGAAAAAAGGAACCAATAC

Downstream 100 bases:

>100_bases
TCATCAATTTTAACTTGTACTGAAATACGTGATTTGTACTATTTTAAATAGGGTGTCAATTGAATCATTCAGTTGATACC
CTATTTTTATGTGAAGTTCA

Product: chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTIKKRGLAKGRGLDALLGSIQKEKLQLEAQAIDHGQLKQIDVNLLKRGEYQPRRFIQEQDLKELAASIEKHGVMQPIVI
RPIQDEQYAYEIIAGERRWRAAQLAGLKEVPAIVRDLNDQVAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIA
ETVGKARTTVSNLLRLLSLDDVIKDFMQEGQLDMGHARAILALKAKDQIAIAKVVIEKNLSVRQTEQLVRDWNAPKQEKP
KAQVAPDIEQLTHRLSERFGANVKIDHNKQGKGKLVIQYHSLDELDGILNICLPDV

Sequences:

>Translated_296_residues
MTIKKRGLAKGRGLDALLGSIQKEKLQLEAQAIDHGQLKQIDVNLLKRGEYQPRRFIQEQDLKELAASIEKHGVMQPIVI
RPIQDEQYAYEIIAGERRWRAAQLAGLKEVPAIVRDLNDQVAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIA
ETVGKARTTVSNLLRLLSLDDVIKDFMQEGQLDMGHARAILALKAKDQIAIAKVVIEKNLSVRQTEQLVRDWNAPKQEKP
KAQVAPDIEQLTHRLSERFGANVKIDHNKQGKGKLVIQYHSLDELDGILNICLPDV
>Mature_295_residues
TIKKRGLAKGRGLDALLGSIQKEKLQLEAQAIDHGQLKQIDVNLLKRGEYQPRRFIQEQDLKELAASIEKHGVMQPIVIR
PIQDEQYAYEIIAGERRWRAAQLAGLKEVPAIVRDLNDQVAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIAE
TVGKARTTVSNLLRLLSLDDVIKDFMQEGQLDMGHARAILALKAKDQIAIAKVVIEKNLSVRQTEQLVRDWNAPKQEKPK
AQVAPDIEQLTHRLSERFGANVKIDHNKQGKGKLVIQYHSLDELDGILNICLPDV

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33413; Mature: 33282

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKKRGLAKGRGLDALLGSIQKEKLQLEAQAIDHGQLKQIDVNLLKRGEYQPRRFIQEQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
DLKELAASIEKHGVMQPIVIRPIQDEQYAYEIIAGERRWRAAQLAGLKEVPAIVRDLNDQ
HHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCHH
VAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIAETVGKARTTVSNLLRLLSLD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DVIKDFMQEGQLDMGHARAILALKAKDQIAIAKVVIEKNLSVRQTEQLVRDWNAPKQEKP
HHHHHHHHCCCCCCCCHHEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
KAQVAPDIEQLTHRLSERFGANVKIDHNKQGKGKLVIQYHSLDELDGILNICLPDV
CCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIKKRGLAKGRGLDALLGSIQKEKLQLEAQAIDHGQLKQIDVNLLKRGEYQPRRFIQEQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHH
DLKELAASIEKHGVMQPIVIRPIQDEQYAYEIIAGERRWRAAQLAGLKEVPAIVRDLNDQ
HHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCHH
VAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIAETVGKARTTVSNLLRLLSLD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DVIKDFMQEGQLDMGHARAILALKAKDQIAIAKVVIEKNLSVRQTEQLVRDWNAPKQEKP
HHHHHHHHCCCCCCCCHHEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
KAQVAPDIEQLTHRLSERFGANVKIDHNKQGKGKLVIQYHSLDELDGILNICLPDV
CCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]