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The map label for this gene is yadH [H]

Identifier: 50085363

GI number: 50085363

Start: 2231470

End: 2232243

Strand: Direct

Name: yadH [H]

Synonym: ACIAD2260

Alternate gene names: 50085363

Gene position: 2231470-2232243 (Clockwise)

Preceding gene: 50085362

Following gene: 50085364

Centisome position: 62.01

GC content: 38.5

Gene sequence:

>774_bases
GTGAACTTTAGTCAGCTCAAAACAGCTTTAGGCACCCTTGTTCGAAAAGAAATTCGTCGTTTTATGCGAATCTGGCCTCA
GACTCTATTACCACCTGCTATTACCATGAGCCTGTACTTTGTTATTTTTGGCAATCTGGTGGGCTCTCGTGTTGGACAAA
TGGGCGGTTTTAGCTATATGCAGTTTATCGTGCCTGGCCTCATTATGATGGCAATTATTACCAACAGTTATGCCAACGTT
TCATCAAGTTTTTTCAGTGCCAAATTTCAGAAAAGCATTGAAGAACTCATCATGAGCCCTGTTCCGCTACATTTAATTTT
ATGGGGATACGTTATCGGCGGAATATGCCGCGGTGTATTGGTCGGAATTATCGTGACCCTCATGAGCCTGTTTTTTACAG
ACCTTTATATTCATAATTGGTTTGTGACTATATATACAGTCTTTATTACCTCTTTTTTATTTTCGTTAGGTGGTTTCATT
AATGCCGTCTATGCCAAATCATTTGATGACATTTCAATTATCCCAACTTTTGTTTTAACACCCTTAACTTATTTGGGTGG
CGTTTTTTACGCTATGAGTGCTTTGAGTCCTTTCTGGCAAAATCTCTCTTTGGTCAATCCGATTGTATATATGGTCAATG
CTTTTCGTTTTGGCATATTAGGACAAAGTGATGTAAATGTTTCATTATCACTCATCGTCGTGACTTTATGCTGTGCCATT
TTATATGGAGTAGCTTATTATTTACTTTCTCGTGGTTCAGGAATGCGTGAATGA

Upstream 100 bases:

>100_bases
AAGGTATTCGTGTACGAAGTATGCGTAATAAATCTAACCGCCTGGAAGAACTGTTCGTGCGTATGGTTGAGAAGAATCTA
GAACAACAAGGAGCTGCATA

Downstream 100 bases:

>100_bases
GTGTAGAACAATCTTTATTAGGTAAAGAAACAGAATATCCAACAACTTACAGCCCAAGTGTTTTGTTTCCAATTTCTCGC
GATGCCGCTCGTGAAAAATA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNFSQLKTALGTLVRKEIRRFMRIWPQTLLPPAITMSLYFVIFGNLVGSRVGQMGGFSYMQFIVPGLIMMAIITNSYANV
SSSFFSAKFQKSIEELIMSPVPLHLILWGYVIGGICRGVLVGIIVTLMSLFFTDLYIHNWFVTIYTVFITSFLFSLGGFI
NAVYAKSFDDISIIPTFVLTPLTYLGGVFYAMSALSPFWQNLSLVNPIVYMVNAFRFGILGQSDVNVSLSLIVVTLCCAI
LYGVAYYLLSRGSGMRE

Sequences:

>Translated_257_residues
MNFSQLKTALGTLVRKEIRRFMRIWPQTLLPPAITMSLYFVIFGNLVGSRVGQMGGFSYMQFIVPGLIMMAIITNSYANV
SSSFFSAKFQKSIEELIMSPVPLHLILWGYVIGGICRGVLVGIIVTLMSLFFTDLYIHNWFVTIYTVFITSFLFSLGGFI
NAVYAKSFDDISIIPTFVLTPLTYLGGVFYAMSALSPFWQNLSLVNPIVYMVNAFRFGILGQSDVNVSLSLIVVTLCCAI
LYGVAYYLLSRGSGMRE
>Mature_257_residues
MNFSQLKTALGTLVRKEIRRFMRIWPQTLLPPAITMSLYFVIFGNLVGSRVGQMGGFSYMQFIVPGLIMMAIITNSYANV
SSSFFSAKFQKSIEELIMSPVPLHLILWGYVIGGICRGVLVGIIVTLMSLFFTDLYIHNWFVTIYTVFITSFLFSLGGFI
NAVYAKSFDDISIIPTFVLTPLTYLGGVFYAMSALSPFWQNLSLVNPIVYMVNAFRFGILGQSDVNVSLSLIVVTLCCAI
LYGVAYYLLSRGSGMRE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=249, Percent_Identity=59.4377510040161, Blast_Score=311, Evalue=2e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28699; Mature: 28699

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]