| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is engD [H]
Identifier: 50085194
GI number: 50085194
Start: 2054819
End: 2055922
Strand: Direct
Name: engD [H]
Synonym: ACIAD2071
Alternate gene names: 50085194
Gene position: 2054819-2055922 (Clockwise)
Preceding gene: 50085193
Following gene: 50085195
Centisome position: 57.1
GC content: 43.12
Gene sequence:
>1104_bases GTGAGTCATTTCATGGGTTTTAATTGCGGTATTGTCGGTCTGCCAAACGTTGGTAAATCAACTCTGTTTAATGCATTGAC CAAAGCAGCGATTGCAGCAGAAAACTTTCCATTTTGTACCATTGAGCCAAATACTGGGATTGTTCCTGTACCTGATGCAC GCTTAGACAAACTTGCAGCAATTGTAAAACCTCAGCGAATCTTACCTACCACAATGGAATTTGTGGATATTGCGGGTCTG GTGGCTGGTGCATCGAAAGGTGAAGGTCTTGGTAACCAGTTTCTTGCCAATATTCGTGAAACCGATGCGATTGCCCACGT GGTACGTTGTTTTGAAGATGAAAATGTCATTCACGTGAATGGCAAAATCGATCCACTTGATGATATCGCAACCATCAACA CTGAGCTTGCATTGGCCGATTTAGATACTGTCGCAAAAGCTCTTCTCCGTTTGACCAAAGTTGCAAAAAGTGGTGATAAG GAAGCTTTAGCAACCAAAGCCGTATTGGAAAAAATTCAGCCATTACTGGATGAAGGCAAACCAGCACGAGCAGCAGACCT GAGCGATGATGAACGTAAATTGATTCGTGGCTTTGGTTTAATGACGTTAAAACCAACCATGTATATTGCAAATGTGGCAG AAGACGGTTTTGAAAACAATCCACATTTAGATGCTGTAAAAAAATTAGCTGCCGAAGAAAATGCGATTGTCGTTCCACTC TGTAACCAAATTGAAGCTGAAATTTCATTGCTGGAAGATGAAGATCGTGCAGAGTTTCTTGAAGCAATGGGAATGGAAGA ACCAGGCCTAAACGTCGTGATCCGTGCTGGTTATGCGCTACTTGGCTTACAAACATACTTTACTGCAGGCGTGCAAGAAG TTCGTGCTTGGACAGTAAAAGTAGGTGCAACTGCCCCACAAGCTGCTGGTGTGATTCATACCGATTTTGAGAAAGGCTTT ATTCGCGCTGAATGTGTTGCATATGATGACTTTGTTCAATACAACGGCGAGGCAGGTGCAAAAGAAGCAGGTAAATGGCG CTTAGAAGGCAAAACTTACGTGGTTCAAGATGGTGATGTGCTGCATTTCCGCTTTAACGTTTAA
Upstream 100 bases:
>100_bases ACGTAAAATCTAAACTTCTTTATGATTCACACCATGCCATGACCTGACTTTGTCATGGCTTTCATGTAAAATCAGCCTCA ATTTTTAATTTACATTTTTT
Downstream 100 bases:
>100_bases AAAATTTAATAAAAAGGCCAGCGAAAGCTGGCTTTTTTATTAGAAATACAAAAAATTAAATAAAAAAGATAATAATAATG ATTATCAATATATTTACATA
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSHFMGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDARLDKLAAIVKPQRILPTTMEFVDIAGL VAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDPLDDIATINTELALADLDTVAKALLRLTKVAKSGDK EALATKAVLEKIQPLLDEGKPARAADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPL CNQIEAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGATAPQAAGVIHTDFEKGF IRAECVAYDDFVQYNGEAGAKEAGKWRLEGKTYVVQDGDVLHFRFNV
Sequences:
>Translated_367_residues MSHFMGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDARLDKLAAIVKPQRILPTTMEFVDIAGL VAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDPLDDIATINTELALADLDTVAKALLRLTKVAKSGDK EALATKAVLEKIQPLLDEGKPARAADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPL CNQIEAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGATAPQAAGVIHTDFEKGF IRAECVAYDDFVQYNGEAGAKEAGKWRLEGKTYVVQDGDVLHFRFNV >Mature_366_residues SHFMGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDARLDKLAAIVKPQRILPTTMEFVDIAGLV AGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDPLDDIATINTELALADLDTVAKALLRLTKVAKSGDKE ALATKAVLEKIQPLLDEGKPARAADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPLC NQIEAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVKVGATAPQAAGVIHTDFEKGFI RAECVAYDDFVQYNGEAGAKEAGKWRLEGKTYVVQDGDVLHFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=365, Percent_Identity=44.6575342465753, Blast_Score=315, Evalue=6e-86, Organism=Homo sapiens, GI58761502, Length=225, Percent_Identity=39.5555555555556, Blast_Score=162, Evalue=3e-40, Organism=Escherichia coli, GI1787454, Length=363, Percent_Identity=70.7988980716253, Blast_Score=538, Evalue=1e-154, Organism=Escherichia coli, GI1789574, Length=139, Percent_Identity=28.7769784172662, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17509631, Length=362, Percent_Identity=40.8839779005525, Blast_Score=288, Evalue=3e-78, Organism=Saccharomyces cerevisiae, GI6319499, Length=369, Percent_Identity=39.0243902439024, Blast_Score=249, Evalue=6e-67, Organism=Saccharomyces cerevisiae, GI6321773, Length=391, Percent_Identity=31.9693094629156, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6321649, Length=224, Percent_Identity=34.375, Blast_Score=87, Evalue=3e-18, Organism=Drosophila melanogaster, GI24640873, Length=363, Percent_Identity=42.9752066115703, Blast_Score=294, Evalue=5e-80, Organism=Drosophila melanogaster, GI24640877, Length=363, Percent_Identity=42.9752066115703, Blast_Score=294, Evalue=5e-80, Organism=Drosophila melanogaster, GI24640875, Length=363, Percent_Identity=42.9752066115703, Blast_Score=294, Evalue=5e-80, Organism=Drosophila melanogaster, GI24640879, Length=328, Percent_Identity=39.6341463414634, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24585318, Length=172, Percent_Identity=29.0697674418605, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 39682; Mature: 39551
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFMGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDARLDKLAA CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHH IVKPQRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVN HHCCCHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEC GKIDPLDDIATINTELALADLDTVAKALLRLTKVAKSGDKEALATKAVLEKIQPLLDEGK CCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC PARAADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPL CCCCCCCCHHHHHHHHHCCCEEECCHHEEEEHHHCCCCCCCCHHHHHHHHCCCCEEEEEC CNQIEAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVK CCCHHHHHHEECCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEE VGATAPQAAGVIHTDFEKGFIRAECVAYDDFVQYNGEAGAKEAGKWRLEGKTYVVQDGDV ECCCCCCCCCCEEECCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCEEECCEEEEEECCCE LHFRFNV EEEEECC >Mature Secondary Structure SHFMGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDARLDKLAA CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCHHHHHHHH IVKPQRILPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVN HHCCCHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEC GKIDPLDDIATINTELALADLDTVAKALLRLTKVAKSGDKEALATKAVLEKIQPLLDEGK CCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC PARAADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLDAVKKLAAEENAIVVPL CCCCCCCCHHHHHHHHHCCCEEECCHHEEEEHHHCCCCCCCCHHHHHHHHCCCCEEEEEC CNQIEAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYALLGLQTYFTAGVQEVRAWTVK CCCHHHHHHEECCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHEEEEEE VGATAPQAAGVIHTDFEKGFIRAECVAYDDFVQYNGEAGAKEAGKWRLEGKTYVVQDGDV ECCCCCCCCCCEEECCCCCCEEEEEEEEHHHHHCCCCCCCCCCCCEEECCEEEEEECCCE LHFRFNV EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA