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The map label for this gene is ydeM [H]

Identifier: 50085016

GI number: 50085016

Start: 1868323

End: 1868769

Strand: Direct

Name: ydeM [H]

Synonym: ACIAD1874

Alternate gene names: 50085016

Gene position: 1868323-1868769 (Clockwise)

Preceding gene: 50085015

Following gene: 50085017

Centisome position: 51.92

GC content: 40.04

Gene sequence:

>447_bases
ATGTTGTATCTTGAAGATCTTAAAATTGGCGATCGTTTTATAAGTCGTGATTATGAAATGACCCTAGAAGAAATTAAGCA
ATTTGCCAGCCTGTATGATCCACAACCTTTTCATCTAGATGAAGAAAAAGCCAGTAAACATCCTATTTTCAAAGGTATCG
CAGCAAGTGGCTGGCATACTTCAGCCGTTACCATGCGACTTTGGACAGAATGCTTTCCTGTCGCTGGAGGGCTGATTGGC
TCTGACTCTAATTTACGATGGCCACGCCCGACTCGACCAGGCGATAAAATTCATGTCGAAGTAGAAATAGCATCCATTAC
TTTATCAAAAACCAAGCCTGATCGTGGAATTGTGAGCTATATCACACAAGCGTTAAACCAATATGGAGATGTTTTATTGA
TCTCCACAACCAAGATTGTTGTATTTAAAAGACATCCTGAAATGTAG

Upstream 100 bases:

>100_bases
ATGATGAACTCATTGAAAAAGATGGTTTGTATGCTCATTTATGGAAAAGACAGACGGGTGGCTTTTTAGTCGATGAGTTT
GAAATTGAGGAAAAACAATA

Downstream 100 bases:

>100_bases
AGATATCGCTTTGTCTAACAATTTTTATTTTTTTTAATTCAAATTCATGCCAAGATATTTCATAGATAACTGCAATATAT
TGGTCAAAGCAACGGATCGC

Product: dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLYLEDLKIGDRFISRDYEMTLEEIKQFASLYDPQPFHLDEEKASKHPIFKGIAASGWHTSAVTMRLWTECFPVAGGLIG
SDSNLRWPRPTRPGDKIHVEVEIASITLSKTKPDRGIVSYITQALNQYGDVLLISTTKIVVFKRHPEM

Sequences:

>Translated_148_residues
MLYLEDLKIGDRFISRDYEMTLEEIKQFASLYDPQPFHLDEEKASKHPIFKGIAASGWHTSAVTMRLWTECFPVAGGLIG
SDSNLRWPRPTRPGDKIHVEVEIASITLSKTKPDRGIVSYITQALNQYGDVLLISTTKIVVFKRHPEM
>Mature_148_residues
MLYLEDLKIGDRFISRDYEMTLEEIKQFASLYDPQPFHLDEEKASKHPIFKGIAASGWHTSAVTMRLWTECFPVAGGLIG
SDSNLRWPRPTRPGDKIHVEVEIASITLSKTKPDRGIVSYITQALNQYGDVLLISTTKIVVFKRHPEM

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 16849; Mature: 16849

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLEDLKIGDRFISRDYEMTLEEIKQFASLYDPQPFHLDEEKASKHPIFKGIAASGWHT
CEEECCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
SAVTMRLWTECFPVAGGLIGSDSNLRWPRPTRPGDKIHVEVEIASITLSKTKPDRGIVSY
HHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHH
ITQALNQYGDVLLISTTKIVVFKRHPEM
HHHHHHHHCCEEEEEEEEEEEEECCCCC
>Mature Secondary Structure
MLYLEDLKIGDRFISRDYEMTLEEIKQFASLYDPQPFHLDEEKASKHPIFKGIAASGWHT
CEEECCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
SAVTMRLWTECFPVAGGLIGSDSNLRWPRPTRPGDKIHVEVEIASITLSKTKPDRGIVSY
HHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCHHHHH
ITQALNQYGDVLLISTTKIVVFKRHPEM
HHHHHHHHCCEEEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]