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The map label for this gene is oruR [H]

Identifier: 50085017

GI number: 50085017

Start: 1868839

End: 1869897

Strand: Direct

Name: oruR [H]

Synonym: ACIAD1875

Alternate gene names: 50085017

Gene position: 1868839-1869897 (Clockwise)

Preceding gene: 50085016

Following gene: 50085018

Centisome position: 51.93

GC content: 39.66

Gene sequence:

>1059_bases
CTGCAATATATTGGTCAAAGCAACGGATCGCGAATGAAAATAAACTCAGCCCGTCAAGAACAAGGAATACCAGGTGTTTA
TGGATTATTATTATTAGATGTTGTATCTCGCTGGGGTTATAACGATGAAACTTTATTTGCGCCTTTCCATTTAAGTAGCG
AACAATTGGCTGATCCCGAATATCGTATTCCAATTCATATTGCTAACGAACTGGTTAAACATGCCTTAAAACTGACTGGT
GAAAGTACGCTTGGCTATCACCTTGGCAATCAGATGCGTATTTCCATTCATGGATTTATTGGGTACGCCATTATGACTGC
TCATGATATTACCGATGCATTGGCCTTAGCGACTCGTTTTATACAGTTGCGTATGCCCTTTTTACAGCTTTATTTTTCAA
CCTTTGGCCCTAAAGCAACTTTGCAGCTACAGTGCGACTTCGATCTTGAACCTTTACGCACCGAAATTATTTTAAGTCTT
ACTATTGGCATTATGAGCATGGCAAAAGCATTAACGGGTTGTGATGAATTAACAGGTGAAGTTGATCTTGATTTTGAAAA
ACCAGAAGGTTTTAACAAGTATTTAGAGAAAATGAATCTAAATATGCGTTTTGATCAACCCCATCTCATTTCAAGTTTTG
ATAAGCATTATTTAGGGTTAAAAATGGTGAATGCTGACCCAATTGCCAGTCAGATTGCAATCAATCAATGCGAAACAGAA
CTTTCTGCTTTGGGTGAACGCCGTCGTTTGGCTATGCGGGTGCGTGATATCTTAACTCATTCTGAACAGCACTATCTAAG
TATCGAAAATGTAGCAGATTTGCTGCATATGTCTGATCGTACCCTAAAACGCCAGCTTGCGGCTGAAGGTACATCATTTT
CGACATTGGTTGATGAAGTTCGTTATCGACATGCTACATCGTTATTGTCCCGGACAGATTATAGTCTGGAACAGATCGCA
GATGAATTAGGTTATTCTGATGTAGCCAACTTTAGTCGTGCCTTTAAACGCTGGAGTGGTCGAAGTCCAAGTAATTGGCG
TAAAGACCCTTACCTATAA

Upstream 100 bases:

>100_bases
TGTTGTATTTAAAAGACATCCTGAAATGTAGAGATATCGCTTTGTCTAACAATTTTTATTTTTTTTAATTCAAATTCATG
CCAAGATATTTCATAGATAA

Downstream 100 bases:

>100_bases
ACTTTTATTTTGAATCAAAAACCTGTATAAACCTATCAAAATCAATAAAATTGAATGTTGAGGAGCTGCCATGAATCATC
CTTCAGAATTGAAGTATGCA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MQYIGQSNGSRMKINSARQEQGIPGVYGLLLLDVVSRWGYNDETLFAPFHLSSEQLADPEYRIPIHIANELVKHALKLTG
ESTLGYHLGNQMRISIHGFIGYAIMTAHDITDALALATRFIQLRMPFLQLYFSTFGPKATLQLQCDFDLEPLRTEIILSL
TIGIMSMAKALTGCDELTGEVDLDFEKPEGFNKYLEKMNLNMRFDQPHLISSFDKHYLGLKMVNADPIASQIAINQCETE
LSALGERRRLAMRVRDILTHSEQHYLSIENVADLLHMSDRTLKRQLAAEGTSFSTLVDEVRYRHATSLLSRTDYSLEQIA
DELGYSDVANFSRAFKRWSGRSPSNWRKDPYL

Sequences:

>Translated_352_residues
MQYIGQSNGSRMKINSARQEQGIPGVYGLLLLDVVSRWGYNDETLFAPFHLSSEQLADPEYRIPIHIANELVKHALKLTG
ESTLGYHLGNQMRISIHGFIGYAIMTAHDITDALALATRFIQLRMPFLQLYFSTFGPKATLQLQCDFDLEPLRTEIILSL
TIGIMSMAKALTGCDELTGEVDLDFEKPEGFNKYLEKMNLNMRFDQPHLISSFDKHYLGLKMVNADPIASQIAINQCETE
LSALGERRRLAMRVRDILTHSEQHYLSIENVADLLHMSDRTLKRQLAAEGTSFSTLVDEVRYRHATSLLSRTDYSLEQIA
DELGYSDVANFSRAFKRWSGRSPSNWRKDPYL
>Mature_352_residues
MQYIGQSNGSRMKINSARQEQGIPGVYGLLLLDVVSRWGYNDETLFAPFHLSSEQLADPEYRIPIHIANELVKHALKLTG
ESTLGYHLGNQMRISIHGFIGYAIMTAHDITDALALATRFIQLRMPFLQLYFSTFGPKATLQLQCDFDLEPLRTEIILSL
TIGIMSMAKALTGCDELTGEVDLDFEKPEGFNKYLEKMNLNMRFDQPHLISSFDKHYLGLKMVNADPIASQIAINQCETE
LSALGERRRLAMRVRDILTHSEQHYLSIENVADLLHMSDRTLKRQLAAEGTSFSTLVDEVRYRHATSLLSRTDYSLEQIA
DELGYSDVANFSRAFKRWSGRSPSNWRKDPYL

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787776, Length=97, Percent_Identity=31.9587628865979, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786776, Length=97, Percent_Identity=27.8350515463918, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 40046; Mature: 40046

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYIGQSNGSRMKINSARQEQGIPGVYGLLLLDVVSRWGYNDETLFAPFHLSSEQLADPE
CCCCCCCCCCEEEECCHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHCCCC
YRIPIHIANELVKHALKLTGESTLGYHLGNQMRISIHGFIGYAIMTAHDITDALALATRF
EEEHHHHHHHHHHHHHHHCCCCHHHEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
IQLRMPFLQLYFSTFGPKATLQLQCDFDLEPLRTEIILSLTIGIMSMAKALTGCDELTGE
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCC
VDLDFEKPEGFNKYLEKMNLNMRFDQPHLISSFDKHYLGLKMVNADPIASQIAINQCETE
EEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHH
LSALGERRRLAMRVRDILTHSEQHYLSIENVADLLHMSDRTLKRQLAAEGTSFSTLVDEV
HHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RYRHATSLLSRTDYSLEQIADELGYSDVANFSRAFKRWSGRSPSNWRKDPYL
HHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQYIGQSNGSRMKINSARQEQGIPGVYGLLLLDVVSRWGYNDETLFAPFHLSSEQLADPE
CCCCCCCCCCEEEECCHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHCCCC
YRIPIHIANELVKHALKLTGESTLGYHLGNQMRISIHGFIGYAIMTAHDITDALALATRF
EEEHHHHHHHHHHHHHHHCCCCHHHEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
IQLRMPFLQLYFSTFGPKATLQLQCDFDLEPLRTEIILSLTIGIMSMAKALTGCDELTGE
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCC
VDLDFEKPEGFNKYLEKMNLNMRFDQPHLISSFDKHYLGLKMVNADPIASQIAINQCETE
EEECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHH
LSALGERRRLAMRVRDILTHSEQHYLSIENVADLLHMSDRTLKRQLAAEGTSFSTLVDEV
HHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RYRHATSLLSRTDYSLEQIADELGYSDVANFSRAFKRWSGRSPSNWRKDPYL
HHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]