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The map label for this gene is 50085008

Identifier: 50085008

GI number: 50085008

Start: 1859557

End: 1860123

Strand: Direct

Name: 50085008

Synonym: ACIAD1864

Alternate gene names: NA

Gene position: 1859557-1860123 (Clockwise)

Preceding gene: 50085006

Following gene: 50085009

Centisome position: 51.67

GC content: 34.57

Gene sequence:

>567_bases
ATGTCGAAAAAAGATGACATTATCAATACCGCCTTGCGTCTTTTCAACTCTAACAGTTACAACTCTGTTGGAATTGATCG
GATCATCCTAGAATCAGGTGTTGCCAAGATGACATTTTATAAATATTTTCCATCAAAAGCGAAATTGATTGAAGAATGCT
TAAATCAACGTAATATGAATTTACAAGAATCCTTGACCGCTTCTCTAGAGGCGTGTGATCCAAATTCTCCATTAGATCGA
ATTAAAGCAATTTATATGTGGTACTCGGCATGGTTTCATACGGATGACTTTAACGGCTGTATGTTTCAGAAAGCGGTTGA
AGAGATTTTTAAAATTTATCCTTCTACTATCAAACCTGCAATTGAGTATAAAGAATGGCTAACTGAACGCATTCTTGAAT
TACTTGATCAAATGAAAATTAAAAATCCTGAACATCTTGCTACATTGCTGGTCAGTATTTTAGATGGTATGACCATGCAT
GCCCAAATTGACAAACACTCGGTTAATATTAATGAATATTGGTCACGCGTCGAAAGATTAATTAAATTTGAGCTACCAAA
AGACTAA

Upstream 100 bases:

>100_bases
CTTCAATGCTATAATGAATTTGCTCAAGTTTCATCTCATATGAAATCTTTCACTAAAATGACCATGTATACACAAATGTC
TTTGGCAGGAACTTTTAAAC

Downstream 100 bases:

>100_bases
AAAAATAAGCGTGACTGCTATTATTTTTATCTTCACGCTTGCGTCTGAAGTCCTCTTTACTGACCATTAAAATTACTTTT
GATGGTCAGTAATTACATGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Bacterial Regulatory Protein; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; Bacterial Regulatory Protein TetR Family Protein; Transcriptional Regulator Protein; Regulatory Protein TetR; LOW QUALITY PROTEIN TetR Family Transcriptional Regulator; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcription Regulator TetR; TetR-Family Protein Transcriptional Regulator; LOW QUALITY PROTEIN Transcriptional Regulator; Regulatory Protein Tetr; LOW QUALITY PROTEIN Bacterial Regulatory Protein; Transcriptional Regulator Tetr Family; TerR Family Transcriptional Regulator; TetR-Family Transcriptional Regulator; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; TetR/AcrR-Family Trancriptional Regulatory Protein

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSKKDDIINTALRLFNSNSYNSVGIDRIILESGVAKMTFYKYFPSKAKLIEECLNQRNMNLQESLTASLEACDPNSPLDR
IKAIYMWYSAWFHTDDFNGCMFQKAVEEIFKIYPSTIKPAIEYKEWLTERILELLDQMKIKNPEHLATLLVSILDGMTMH
AQIDKHSVNINEYWSRVERLIKFELPKD

Sequences:

>Translated_188_residues
MSKKDDIINTALRLFNSNSYNSVGIDRIILESGVAKMTFYKYFPSKAKLIEECLNQRNMNLQESLTASLEACDPNSPLDR
IKAIYMWYSAWFHTDDFNGCMFQKAVEEIFKIYPSTIKPAIEYKEWLTERILELLDQMKIKNPEHLATLLVSILDGMTMH
AQIDKHSVNINEYWSRVERLIKFELPKD
>Mature_187_residues
SKKDDIINTALRLFNSNSYNSVGIDRIILESGVAKMTFYKYFPSKAKLIEECLNQRNMNLQESLTASLEACDPNSPLDRI
KAIYMWYSAWFHTDDFNGCMFQKAVEEIFKIYPSTIKPAIEYKEWLTERILELLDQMKIKNPEHLATLLVSILDGMTMHA
QIDKHSVNINEYWSRVERLIKFELPKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22010; Mature: 21878

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKDDIINTALRLFNSNSYNSVGIDRIILESGVAKMTFYKYFPSKAKLIEECLNQRNMN
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCC
LQESLTASLEACDPNSPLDRIKAIYMWYSAWFHTDDFNGCMFQKAVEEIFKIYPSTIKPA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHH
IEYKEWLTERILELLDQMKIKNPEHLATLLVSILDGMTMHAQIDKHSVNINEYWSRVERL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHH
IKFELPKD
HHHCCCCC
>Mature Secondary Structure 
SKKDDIINTALRLFNSNSYNSVGIDRIILESGVAKMTFYKYFPSKAKLIEECLNQRNMN
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHCCCC
LQESLTASLEACDPNSPLDRIKAIYMWYSAWFHTDDFNGCMFQKAVEEIFKIYPSTIKPA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHH
IEYKEWLTERILELLDQMKIKNPEHLATLLVSILDGMTMHAQIDKHSVNINEYWSRVERL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHH
IKFELPKD
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA