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The map label for this gene is ybeQ [H]

Identifier: 50084871

GI number: 50084871

Start: 1723656

End: 1724834

Strand: Reverse

Name: ybeQ [H]

Synonym: ACIAD1717

Alternate gene names: 50084871

Gene position: 1724834-1723656 (Counterclockwise)

Preceding gene: 50084872

Following gene: 50084857

Centisome position: 47.93

GC content: 29.52

Gene sequence:

>1179_bases
ATGGGTACCAATATATCTGGAATGATTTTTAAATGTTCTAGCGACCAAGATGATATTGAAAATTTAGTTCATAAATGGAT
AAAAGATGAAGATTCATTTTTTGATCAACAATCAACTATACATATTGAATTTTTAAATAATAATTTAATTCTTATTCATA
ATCATGAGATTTTTGAGTCTGCAAAAAATAATCCTAAATTATGGGAAAAACTACTACTCAATTTAAAGGAATCGGAGTGG
ACAGTTTTCTTTAAATGTGTCGATAGCTTTGAATCATTTAGTTATATCATATATCAAAATCGTAAAGAAATACGTAAAGT
AATCCAATATCAGGGATCAAATCTTTATCAAACTGGCCAACCTTTGAATTGCGAAAAATCTTGGCTGAATTTTACTATTT
TTTATGAACGAGAAAGTTACACTGATGGTTCTTATAAAATTGAAAGATATGAGATTCCAGATCTAAATGATGAGAGCAAT
CCAGATATTCAATATCACAAGTACTATTATATTATAGAAAAAAGCTTATCTTTTTATCATCATTACCTTGCTCGTGCACT
TTTAGTAGAAGTGCTTCAATATCACTTAGGTTTTGATATTATTGATAGCGACTACAATACATCTCAATCTTTAATTATCA
ACTGTGAAGATATTCCAAACTTTAAACGAACATTAAAACAAGCTCAAGAAGGATGTATCAAGGCTCAAAATCAATTAGCA
TCTATGTATCTAAATGGTTTAGATGTTACTCAAAATATGTCTTTAGCGCTTTTTTGGTATGAAAAAACGGCGTCTCAAAA
TGATCCTGAAGGAGAACTAAATCTAGGTAAACTCTATTTGAACGGCCTAGGGATAGAAAAAAATTATGAGTTAGGATTAA
CTTGGATTAAAAAATCAGTAAAGCAGAATTATCCAGATGCCTATTTTACCTTGGCGGAGTTGTATGAAAAAGGTCATATT
GTTCAAAAAGATATTCAACAAGCTTTAATATTTTATAAAAAGGCTGCAAATCTTAGACATGCAACTTCCGCTTATAGATT
AGGCCAAATATTTGAATTAGGTCAAGGAGTTACCCTAGATTTAAAATTAGCTAAAAGGTTTTATCATCAAGCAGCAAGTA
ACTTTAGCTCAGAGGCCAAAAATCGTTTAGATATTTTAGATCAGTTGATAAATAAGTAG

Upstream 100 bases:

>100_bases
TTTAATAAGAAAGAAAATATTTAGATATATAATCAATCAACTTGTAAAAAATAAAGCAACTTATTAGTAAATTATTTTAT
AGAAATTTTAAGAGAAATAT

Downstream 100 bases:

>100_bases
AAAAATTATTTAGAAAATATATAGTAAGAATAAAAGGGACTCCTGAGAGTCCCTTTTTTTTAAGCGATTGAATTATTTTT
CAAGGGCATATGCAATCACG

Product: regulatory protein (PobS)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MGTNISGMIFKCSSDQDDIENLVHKWIKDEDSFFDQQSTIHIEFLNNNLILIHNHEIFESAKNNPKLWEKLLLNLKESEW
TVFFKCVDSFESFSYIIYQNRKEIRKVIQYQGSNLYQTGQPLNCEKSWLNFTIFYERESYTDGSYKIERYEIPDLNDESN
PDIQYHKYYYIIEKSLSFYHHYLARALLVEVLQYHLGFDIIDSDYNTSQSLIINCEDIPNFKRTLKQAQEGCIKAQNQLA
SMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKNYELGLTWIKKSVKQNYPDAYFTLAELYEKGHI
VQKDIQQALIFYKKAANLRHATSAYRLGQIFELGQGVTLDLKLAKRFYHQAASNFSSEAKNRLDILDQLINK

Sequences:

>Translated_392_residues
MGTNISGMIFKCSSDQDDIENLVHKWIKDEDSFFDQQSTIHIEFLNNNLILIHNHEIFESAKNNPKLWEKLLLNLKESEW
TVFFKCVDSFESFSYIIYQNRKEIRKVIQYQGSNLYQTGQPLNCEKSWLNFTIFYERESYTDGSYKIERYEIPDLNDESN
PDIQYHKYYYIIEKSLSFYHHYLARALLVEVLQYHLGFDIIDSDYNTSQSLIINCEDIPNFKRTLKQAQEGCIKAQNQLA
SMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKNYELGLTWIKKSVKQNYPDAYFTLAELYEKGHI
VQKDIQQALIFYKKAANLRHATSAYRLGQIFELGQGVTLDLKLAKRFYHQAASNFSSEAKNRLDILDQLINK
>Mature_391_residues
GTNISGMIFKCSSDQDDIENLVHKWIKDEDSFFDQQSTIHIEFLNNNLILIHNHEIFESAKNNPKLWEKLLLNLKESEWT
VFFKCVDSFESFSYIIYQNRKEIRKVIQYQGSNLYQTGQPLNCEKSWLNFTIFYERESYTDGSYKIERYEIPDLNDESNP
DIQYHKYYYIIEKSLSFYHHYLARALLVEVLQYHLGFDIIDSDYNTSQSLIINCEDIPNFKRTLKQAQEGCIKAQNQLAS
MYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKNYELGLTWIKKSVKQNYPDAYFTLAELYEKGHIV
QKDIQQALIFYKKAANLRHATSAYRLGQIFELGQGVTLDLKLAKRFYHQAASNFSSEAKNRLDILDQLINK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=224, Percent_Identity=29.4642857142857, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI151301150, Length=145, Percent_Identity=30.3448275862069, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87081769, Length=163, Percent_Identity=31.2883435582822, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786867, Length=96, Percent_Identity=35.4166666666667, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17563256, Length=249, Percent_Identity=27.3092369477912, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 45980; Mature: 45849

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTNISGMIFKCSSDQDDIENLVHKWIKDEDSFFDQQSTIHIEFLNNNLILIHNHEIFES
CCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHCCCCCEEEEEEECCCEEEEECHHHHHH
AKNNPKLWEKLLLNLKESEWTVFFKCVDSFESFSYIIYQNRKEIRKVIQYQGSNLYQTGQ
CCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCCCC
PLNCEKSWLNFTIFYERESYTDGSYKIERYEIPDLNDESNPDIQYHKYYYIIEKSLSFYH
CCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEEHHHHHHH
HYLARALLVEVLQYHLGFDIIDSDYNTSQSLIINCEDIPNFKRTLKQAQEGCIKAQNQLA
HHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKNYELGLTWIKKSV
HHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHH
KQNYPDAYFTLAELYEKGHIVQKDIQQALIFYKKAANLRHATSAYRLGQIFELGQGVTLD
HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEE
LKLAKRFYHQAASNFSSEAKNRLDILDQLINK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GTNISGMIFKCSSDQDDIENLVHKWIKDEDSFFDQQSTIHIEFLNNNLILIHNHEIFES
CCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHCCCCCEEEEEEECCCEEEEECHHHHHH
AKNNPKLWEKLLLNLKESEWTVFFKCVDSFESFSYIIYQNRKEIRKVIQYQGSNLYQTGQ
CCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCCCC
PLNCEKSWLNFTIFYERESYTDGSYKIERYEIPDLNDESNPDIQYHKYYYIIEKSLSFYH
CCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEEHHHHHHH
HYLARALLVEVLQYHLGFDIIDSDYNTSQSLIINCEDIPNFKRTLKQAQEGCIKAQNQLA
HHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKNYELGLTWIKKSV
HHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHH
KQNYPDAYFTLAELYEKGHIVQKDIQQALIFYKKAANLRHATSAYRLGQIFELGQGVTLD
HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEE
LKLAKRFYHQAASNFSSEAKNRLDILDQLINK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]