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The map label for this gene is pcaC

Identifier: 50084864

GI number: 50084864

Start: 1715372

End: 1715776

Strand: Direct

Name: pcaC

Synonym: ACIAD1710

Alternate gene names: 50084864

Gene position: 1715372-1715776 (Clockwise)

Preceding gene: 50084863

Following gene: 50084865

Centisome position: 47.67

GC content: 42.72

Gene sequence:

>405_bases
ATGAATGATGAACAACGTTATAAACAAGGGCTGGAAGTCCGTACAGAAGTTCTGGGTGAAAAGCATGTTAACCGTTCACT
TGAGAACCTAAACGACTTCAATCAGGATTTTCAAAACTTTATTAGCCGTTTTGCATGGGGAGAGGTTTGGTCTCGTCCTG
GACTTCCTCGTCATACGCGTAGTTTGGTCACAATTGCAGTGTTGTTGGCGCTTGGGCGTGAAGATGAGCTGCGTATGCAT
TTACGTGCCTGTTTCAACAATGGTGTGACCAAAGATGAATTAAAAGAGTTGATTCTACATTGTTCACTTTATGCAGGCTT
ACCCGCTTCAAATGCTGCGATGCATATGGCAGAAGAGGTCTTTAAGGACTTGGGAATTGCACCTGAAAAAGTAAACAAGG
ATTAA

Upstream 100 bases:

>100_bases
CCTGAGCATGTTGATTATTCCTGCTGCTGCCGCTGCAATTGCAATTTTTGTTAAATCCCTTGTTGCACATACAGATGCAA
CTTGATGTGAGGTTTCTCTT

Downstream 100 bases:

>100_bases
TGGATTTAGAGGGAGTAGAAAATGTCTCAAATTATTTGGGGAGCTTACGCTCAGCGTAATACCGAAGATCATCCGCCAGC
TTATGCACCAGGTTATAAAA

Product: gamma-carboxymuconolactone decarboxylase (CMD)

Products: NA

Alternate protein names: CMD

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNDEQRYKQGLEVRTEVLGEKHVNRSLENLNDFNQDFQNFISRFAWGEVWSRPGLPRHTRSLVTIAVLLALGREDELRMH
LRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEVFKDLGIAPEKVNKD

Sequences:

>Translated_134_residues
MNDEQRYKQGLEVRTEVLGEKHVNRSLENLNDFNQDFQNFISRFAWGEVWSRPGLPRHTRSLVTIAVLLALGREDELRMH
LRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEVFKDLGIAPEKVNKD
>Mature_134_residues
MNDEQRYKQGLEVRTEVLGEKHVNRSLENLNDFNQDFQNFISRFAWGEVWSRPGLPRHTRSLVTIAVLLALGREDELRMH
LRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEVFKDLGIAPEKVNKD

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DC4C_ACIAD (P20370)

Other databases:

- EMBL:   L05770
- EMBL:   CR543861
- PIR:   B35119
- RefSeq:   YP_046374.1
- ProteinModelPortal:   P20370
- SMR:   P20370
- STRING:   P20370
- GeneID:   2879433
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD1710
- NMPDR:   fig|62977.3.peg.1636
- eggNOG:   COG0599
- HOGENOM:   HBG466022
- OMA:   EMITRHA
- ProtClustDB:   CLSK707360
- BioCyc:   ASP62977:ACIAD1710-MONOMER
- InterPro:   IPR003779
- InterPro:   IPR012788
- TIGRFAMs:   TIGR02425

Pfam domain/function: PF02627 CMD

EC number: =4.1.1.44

Molecular weight: Translated: 15365; Mature: 15365

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDEQRYKQGLEVRTEVLGEKHVNRSLENLNDFNQDFQNFISRFAWGEVWSRPGLPRHTR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
SLVTIAVLLALGREDELRMHLRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEV
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FKDLGIAPEKVNKD
HHHHCCCCCCCCCC
>Mature Secondary Structure
MNDEQRYKQGLEVRTEVLGEKHVNRSLENLNDFNQDFQNFISRFAWGEVWSRPGLPRHTR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
SLVTIAVLLALGREDELRMHLRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEV
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FKDLGIAPEKVNKD
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704