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The map label for this gene is ygaY [H]

Identifier: 50084853

GI number: 50084853

Start: 1703579

End: 1704781

Strand: Direct

Name: ygaY [H]

Synonym: ACIAD1698

Alternate gene names: 50084853

Gene position: 1703579-1704781 (Clockwise)

Preceding gene: 50084852

Following gene: 50084855

Centisome position: 47.34

GC content: 39.57

Gene sequence:

>1203_bases
ATGAATAGAATAATTCCATCCAGTGCAGATCATATGCAGCTCTCTAAAGGTTTGGTGTTTATACTGGCGATGACCTGTGG
TATTTGTGCTGGATCGAATTATTATAATCAACCGTTAATCTATTCAATTGCGCATGCGTTAGGGGTAAATCCAGAACAAG
CGGCTCTGGTGATTGTAATTGGTCAGTTATCTTATGCAGTTGGGCTGTTTTTACTCGTGCCTATGGGGGATTTTTTTGAG
AAAAGATCATATATCGCCATTTTAATGTCCTGTACAGGATTTGCTCAAATCGGACTATCACTGAGTCCTAATCTGGCAAC
TTTATATAGTCTCACGTTTCTATCCACTTTTTTCTCTGTATCTACACAAGTTTTAGTACCATTTGCAGCAGGTTTGGCTT
CACCTCAAAAAAGCCCGCAAGTTGTAGGTACTTTGATGAGTGGGCTGTTTATGGGGATTCTACTGGCGCGTTCAATAGCA
GGACTATTATCTACAATCTGGTCGTGGCATGCGGTGTATTTGATTAGTGGTTGTTTAATTCTATGTTTCGCAGGAATTGT
CTGGAATAAGTTACCTGTAAGTCGAAATTCAGGACAACTCAAAGTCTGGCAGATTTATACTTCGCTGTTTTCCTTGGCTA
CGCATGAACCTCACCTGATTAGACGTGGCTTAGTGGGTGGAATTGGTTTTGGTATATTGGCTCTGATTTTTACCACGATG
ACATTTTTGCTGGCCAATGCACCTTATTATTTTAATGATTTTCAAATAGGCTTATTTGGCATTGTAGGATTGGCTGGTGT
ATTTGCAACTCCTTGGGCAGGTAAAAATATTGCAGGGCAAAGAGAAAATATCACTTCGCTCGTGAGTCTTGCTTTATTAG
TTTTGGCGTGGGTTCCATTGTTTTTTGCCCAAAAGTTTTTAGTTTTATATGCAATTGGTGTGATTCTCGCTTATTTTGGT
TTATCTGCATTACACGTATTGAACCAGAATCTGGTGTATCGTATTTCACCTCAAGCACGCTCACGTATTAATTCAATTTA
TATGACATTATATTTTGGCGGAGCAGCAATAGGGTCTTTTGTGGCTGTGTATGCTTGGAAACACTGGGGATGGAGTGCAT
GCGTGGTCATTGGCTCAATGATGGCGGTGATCTGTTTTATCATTGATCGTTATGATTTTTATAAAATGAGACAGCTTAAA
TGA

Upstream 100 bases:

>100_bases
TCATCAAGGAGAGCGAAAAGTATTTGATGGCCGTAAAGCAGATGTATCGCGTATCAACTTCGTGTCAATGTACAAGTTTT
AAAAAGGAGATTGATACGAA

Downstream 100 bases:

>100_bases
ATTGATTAAGCCATAACGACTTAATCAATAATAAAATTTAGCGCCGTATAATCATAAATGTAGCAGATGCAAAAGCATAA
ATTTTGCCTTGCTCATCTAA

Product: MFS family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNRIIPSSADHMQLSKGLVFILAMTCGICAGSNYYNQPLIYSIAHALGVNPEQAALVIVIGQLSYAVGLFLLVPMGDFFE
KRSYIAILMSCTGFAQIGLSLSPNLATLYSLTFLSTFFSVSTQVLVPFAAGLASPQKSPQVVGTLMSGLFMGILLARSIA
GLLSTIWSWHAVYLISGCLILCFAGIVWNKLPVSRNSGQLKVWQIYTSLFSLATHEPHLIRRGLVGGIGFGILALIFTTM
TFLLANAPYYFNDFQIGLFGIVGLAGVFATPWAGKNIAGQRENITSLVSLALLVLAWVPLFFAQKFLVLYAIGVILAYFG
LSALHVLNQNLVYRISPQARSRINSIYMTLYFGGAAIGSFVAVYAWKHWGWSACVVIGSMMAVICFIIDRYDFYKMRQLK

Sequences:

>Translated_400_residues
MNRIIPSSADHMQLSKGLVFILAMTCGICAGSNYYNQPLIYSIAHALGVNPEQAALVIVIGQLSYAVGLFLLVPMGDFFE
KRSYIAILMSCTGFAQIGLSLSPNLATLYSLTFLSTFFSVSTQVLVPFAAGLASPQKSPQVVGTLMSGLFMGILLARSIA
GLLSTIWSWHAVYLISGCLILCFAGIVWNKLPVSRNSGQLKVWQIYTSLFSLATHEPHLIRRGLVGGIGFGILALIFTTM
TFLLANAPYYFNDFQIGLFGIVGLAGVFATPWAGKNIAGQRENITSLVSLALLVLAWVPLFFAQKFLVLYAIGVILAYFG
LSALHVLNQNLVYRISPQARSRINSIYMTLYFGGAAIGSFVAVYAWKHWGWSACVVIGSMMAVICFIIDRYDFYKMRQLK
>Mature_400_residues
MNRIIPSSADHMQLSKGLVFILAMTCGICAGSNYYNQPLIYSIAHALGVNPEQAALVIVIGQLSYAVGLFLLVPMGDFFE
KRSYIAILMSCTGFAQIGLSLSPNLATLYSLTFLSTFFSVSTQVLVPFAAGLASPQKSPQVVGTLMSGLFMGILLARSIA
GLLSTIWSWHAVYLISGCLILCFAGIVWNKLPVSRNSGQLKVWQIYTSLFSLATHEPHLIRRGLVGGIGFGILALIFTTM
TFLLANAPYYFNDFQIGLFGIVGLAGVFATPWAGKNIAGQRENITSLVSLALLVLAWVPLFFAQKFLVLYAIGVILAYFG
LSALHVLNQNLVYRISPQARSRINSIYMTLYFGGAAIGSFVAVYAWKHWGWSACVVIGSMMAVICFIIDRYDFYKMRQLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=366, Percent_Identity=20.7650273224044, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43736; Mature: 43736

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]