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The map label for this gene is acdB [H]

Identifier: 50084855

GI number: 50084855

Start: 1705546

End: 1707348

Strand: Direct

Name: acdB [H]

Synonym: ACIAD1700

Alternate gene names: 50084855

Gene position: 1705546-1707348 (Clockwise)

Preceding gene: 50084853

Following gene: 50084856

Centisome position: 47.39

GC content: 40.27

Gene sequence:

>1803_bases
ATGCCACTCTATAAAGCGCCACTTCGTGATATGCAATTTGTGTTGTATGAGTTGTTAAATATTGAACAGCGTTATCAGCA
GTTTCCAGAGTATGCAGATCAAATGAATATGGATGTCGTTAATCAGTATCTGGAAGTGGCCGCGGATTTTTGTGAAAATG
AAATTGCACCGCTTAATCAAAATGGTGATCAAGAAGGATGTCATTTTGAACAAGGCAAAGTTACGACACCAAGAGGCTTT
AAAGAGGCCCATCAAAAATATGCAGAACTTGGTTTTACCTCTTTAACTGCCGATCCTAAATATGGTGGTCAAGGTATGCC
AACTTTATTGCGTATAGCGATTTCAGAAATGTTGTGTGGCTCAAACTGGTCTTGGGCAATGTATCAAGGGCTTTCACACG
GAGCAATGCGTACACTGGAACACCATGGTACCGAACAACAAAAGCAAACATTTTTGACAAAACTTGTTGCAGGCATCTGG
ACAGGAACCATGTGTTTGACTGAATCACATGCAGGCTCCGATCTGGGTTTGATTCGTACCAGAGCCGAACCTCAGGCTGA
TGGCAGCTACGCGATTACAGGTGAGAAAATTTTTATCTCTGCTGGTGAGCATGATTTGGCTGAAAATATTATCCATATTG
TATTGGCTCGTTTACCCAATGCACCCGCAGGTACCAAAGGGATTTCGTTATTTATCGTACCAAAATTTAATGTTGATGAA
TTTGGCCATCTTCTAGAACGTAATCACGTAGTTTGTAGTGCCATTGAACATAAAATGGGAATTCATGGTAATGCAACTTG
TGTGATGAATTTCGATGCAGCTCAAGGCTTTCTGATTGGCCCAGAAAACCGTGGACTGAATTGCATGTTTACCTTTATGA
ATACAGCACGGATTGGTACAGCCGTTCAGGGACTGGCGGCTTCACAAATCGCTTTTCAGGGCGCACTTGAATATGCCAGG
GATCGTTTGGCTATGCGAGCTTTAAGTGGCATACAGTATCCAGAGAAGAATGCAGATCCAATTATTGTCCATCCTGCGGT
ACGCAGTATGTTGATGACCCAAAAAGCCTTTGCTGAAGGTGGGCGGGCACTGGCGTATTTTTTAGCGCAACATGCAGATA
TTGTTGAAAAAACAAAAGACCCACAACAAAAACAAGCTTCAGATGAACTTTTGGCTTTTCTCACTCCAATTGCCAAGGCA
TTTCTTACAGAATCGGGCAATGAATCTGCCAAGCATGGCGTACAAATCTTTGGCGGGCATGGTTTTATTATTGAACATGG
TATGGAGCAAATTGTTCGTGATGCCCGTATTTCAACTTTATATGAAGGCACAACTGAAATTCAGTCACTCGATTTACTAG
CGCGTAAAGTGCTCAAATCAGAAGGCAAGTTGCTTAAGAATATGACTGATCTCATCGATCAATTCATTTTTGAAAATCAA
TCAAATATCCATTTAAAGTCATATCTAGATCGACTATCTAATTTAAACATGGAATGGCTAGAAATAACTCAATACATTAC
AAAGAATGCAAAACAGAATCCTGAAGAAATTGGTGCGGCTTCTGTCGATTATTTATATTACTCCAGTTATATCGTTTTTG
CTTATTTGTGGGCGCGTATGGCAAAAATTGCGCAACACAAACTGGATAAAGGAACAACTGAAGAAAAGTTTTATCAAGCT
AAACTCAAAACAGCACAATTTTTCTATGACAAAATATTAAATCGTACTCAGCAGCATTTAGCGTCGATTAAAACAGGTGC
TGAATCAGTGATGGCTCTGGATGCAGAAGATTTTGCCTTTTAA

Upstream 100 bases:

>100_bases
GAAATTAATTTTGCAATATGAAATTTTTTTGATATTTTAAGTGTGTAGGATACATCAACTCTCAGAATGACTGAGGCAAA
ATAAGTACAAGGAATAGGAT

Downstream 100 bases:

>100_bases
TCGATGATAAACATGGAGATATTGAACATCAGTAGTCGGACTGATGTTTTAAATAGCTTTAATGAGCAGATGCATCAGGG
CTGACTGCTGAAACGGCTTT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MPLYKAPLRDMQFVLYELLNIEQRYQQFPEYADQMNMDVVNQYLEVAADFCENEIAPLNQNGDQEGCHFEQGKVTTPRGF
KEAHQKYAELGFTSLTADPKYGGQGMPTLLRIAISEMLCGSNWSWAMYQGLSHGAMRTLEHHGTEQQKQTFLTKLVAGIW
TGTMCLTESHAGSDLGLIRTRAEPQADGSYAITGEKIFISAGEHDLAENIIHIVLARLPNAPAGTKGISLFIVPKFNVDE
FGHLLERNHVVCSAIEHKMGIHGNATCVMNFDAAQGFLIGPENRGLNCMFTFMNTARIGTAVQGLAASQIAFQGALEYAR
DRLAMRALSGIQYPEKNADPIIVHPAVRSMLMTQKAFAEGGRALAYFLAQHADIVEKTKDPQQKQASDELLAFLTPIAKA
FLTESGNESAKHGVQIFGGHGFIIEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFIFENQ
SNIHLKSYLDRLSNLNMEWLEITQYITKNAKQNPEEIGAASVDYLYYSSYIVFAYLWARMAKIAQHKLDKGTTEEKFYQA
KLKTAQFFYDKILNRTQQHLASIKTGAESVMALDAEDFAF

Sequences:

>Translated_600_residues
MPLYKAPLRDMQFVLYELLNIEQRYQQFPEYADQMNMDVVNQYLEVAADFCENEIAPLNQNGDQEGCHFEQGKVTTPRGF
KEAHQKYAELGFTSLTADPKYGGQGMPTLLRIAISEMLCGSNWSWAMYQGLSHGAMRTLEHHGTEQQKQTFLTKLVAGIW
TGTMCLTESHAGSDLGLIRTRAEPQADGSYAITGEKIFISAGEHDLAENIIHIVLARLPNAPAGTKGISLFIVPKFNVDE
FGHLLERNHVVCSAIEHKMGIHGNATCVMNFDAAQGFLIGPENRGLNCMFTFMNTARIGTAVQGLAASQIAFQGALEYAR
DRLAMRALSGIQYPEKNADPIIVHPAVRSMLMTQKAFAEGGRALAYFLAQHADIVEKTKDPQQKQASDELLAFLTPIAKA
FLTESGNESAKHGVQIFGGHGFIIEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFIFENQ
SNIHLKSYLDRLSNLNMEWLEITQYITKNAKQNPEEIGAASVDYLYYSSYIVFAYLWARMAKIAQHKLDKGTTEEKFYQA
KLKTAQFFYDKILNRTQQHLASIKTGAESVMALDAEDFAF
>Mature_599_residues
PLYKAPLRDMQFVLYELLNIEQRYQQFPEYADQMNMDVVNQYLEVAADFCENEIAPLNQNGDQEGCHFEQGKVTTPRGFK
EAHQKYAELGFTSLTADPKYGGQGMPTLLRIAISEMLCGSNWSWAMYQGLSHGAMRTLEHHGTEQQKQTFLTKLVAGIWT
GTMCLTESHAGSDLGLIRTRAEPQADGSYAITGEKIFISAGEHDLAENIIHIVLARLPNAPAGTKGISLFIVPKFNVDEF
GHLLERNHVVCSAIEHKMGIHGNATCVMNFDAAQGFLIGPENRGLNCMFTFMNTARIGTAVQGLAASQIAFQGALEYARD
RLAMRALSGIQYPEKNADPIIVHPAVRSMLMTQKAFAEGGRALAYFLAQHADIVEKTKDPQQKQASDELLAFLTPIAKAF
LTESGNESAKHGVQIFGGHGFIIEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFIFENQS
NIHLKSYLDRLSNLNMEWLEITQYITKNAKQNPEEIGAASVDYLYYSSYIVFAYLWARMAKIAQHKLDKGTTEEKFYQAK
LKTAQFFYDKILNRTQQHLASIKTGAESVMALDAEDFAF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=416, Percent_Identity=27.6442307692308, Blast_Score=123, Evalue=5e-28,
Organism=Homo sapiens, GI4557233, Length=421, Percent_Identity=26.1282660332542, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI21361497, Length=448, Percent_Identity=26.7857142857143, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI4557231, Length=380, Percent_Identity=28.9473684210526, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI187960098, Length=380, Percent_Identity=28.9473684210526, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI226958412, Length=444, Percent_Identity=25.2252252252252, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI226958414, Length=382, Percent_Identity=26.4397905759162, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4557235, Length=314, Percent_Identity=29.2993630573248, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI76496475, Length=314, Percent_Identity=29.2993630573248, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI4501857, Length=397, Percent_Identity=26.1964735516373, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI7656849, Length=423, Percent_Identity=26.0047281323877, Blast_Score=93, Evalue=9e-19,
Organism=Escherichia coli, GI87082384, Length=329, Percent_Identity=28.5714285714286, Blast_Score=109, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=401, Percent_Identity=29.426433915212, Blast_Score=112, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17533517, Length=429, Percent_Identity=26.3403263403263, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=392, Percent_Identity=28.5714285714286, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=375, Percent_Identity=26.1333333333333, Blast_Score=99, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=375, Percent_Identity=28, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=405, Percent_Identity=23.7037037037037, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI86563383, Length=332, Percent_Identity=26.5060240963855, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=332, Percent_Identity=26.5060240963855, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=373, Percent_Identity=23.8605898123324, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17551932, Length=371, Percent_Identity=26.6846361185984, Blast_Score=86, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=356, Percent_Identity=25.8426966292135, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=247, Percent_Identity=29.1497975708502, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=183, Percent_Identity=28.9617486338798, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24646207, Length=419, Percent_Identity=26.491646778043, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI21355753, Length=438, Percent_Identity=27.1689497716895, Blast_Score=111, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21356377, Length=454, Percent_Identity=26.8722466960352, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24666513, Length=376, Percent_Identity=26.8617021276596, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24660351, Length=315, Percent_Identity=30.1587301587302, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI281363737, Length=348, Percent_Identity=27.5862068965517, Blast_Score=95, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 67103; Mature: 66972

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLYKAPLRDMQFVLYELLNIEQRYQQFPEYADQMNMDVVNQYLEVAADFCENEIAPLNQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC
NGDQEGCHFEQGKVTTPRGFKEAHQKYAELGFTSLTADPKYGGQGMPTLLRIAISEMLCG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHC
SNWSWAMYQGLSHGAMRTLEHHGTEQQKQTFLTKLVAGIWTGTMCLTESHAGSDLGLIRT
CCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEE
RAEPQADGSYAITGEKIFISAGEHDLAENIIHIVLARLPNAPAGTKGISLFIVPKFNVDE
CCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHH
FGHLLERNHVVCSAIEHKMGIHGNATCVMNFDAAQGFLIGPENRGLNCMFTFMNTARIGT
HHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCCCCEEEEEEHHHHHHHH
AVQGLAASQIAFQGALEYARDRLAMRALSGIQYPEKNADPIIVHPAVRSMLMTQKAFAEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHCC
GRALAYFLAQHADIVEKTKDPQQKQASDELLAFLTPIAKAFLTESGNESAKHGVQIFGGH
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEECCC
GFIIEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFIFENQ
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SNIHLKSYLDRLSNLNMEWLEITQYITKNAKQNPEEIGAASVDYLYYSSYIVFAYLWARM
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
AKIAQHKLDKGTTEEKFYQAKLKTAQFFYDKILNRTQQHLASIKTGAESVMALDAEDFAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCHHCCC
>Mature Secondary Structure 
PLYKAPLRDMQFVLYELLNIEQRYQQFPEYADQMNMDVVNQYLEVAADFCENEIAPLNQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC
NGDQEGCHFEQGKVTTPRGFKEAHQKYAELGFTSLTADPKYGGQGMPTLLRIAISEMLCG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHC
SNWSWAMYQGLSHGAMRTLEHHGTEQQKQTFLTKLVAGIWTGTMCLTESHAGSDLGLIRT
CCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEE
RAEPQADGSYAITGEKIFISAGEHDLAENIIHIVLARLPNAPAGTKGISLFIVPKFNVDE
CCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHH
FGHLLERNHVVCSAIEHKMGIHGNATCVMNFDAAQGFLIGPENRGLNCMFTFMNTARIGT
HHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCCCCEEEEEEHHHHHHHH
AVQGLAASQIAFQGALEYARDRLAMRALSGIQYPEKNADPIIVHPAVRSMLMTQKAFAEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHCC
GRALAYFLAQHADIVEKTKDPQQKQASDELLAFLTPIAKAFLTESGNESAKHGVQIFGGH
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEECCC
GFIIEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFIFENQ
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SNIHLKSYLDRLSNLNMEWLEITQYITKNAKQNPEEIGAASVDYLYYSSYIVFAYLWARM
CCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH
AKIAQHKLDKGTTEEKFYQAKLKTAQFFYDKILNRTQQHLASIKTGAESVMALDAEDFAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]