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The map label for this gene is padR [H]

Identifier: 50084810

GI number: 50084810

Start: 1651702

End: 1652244

Strand: Reverse

Name: padR [H]

Synonym: ACIAD1653

Alternate gene names: 50084810

Gene position: 1652244-1651702 (Counterclockwise)

Preceding gene: 50084813

Following gene: 50084809

Centisome position: 45.91

GC content: 40.15

Gene sequence:

>543_bases
ATGTCGCTTGCGCATGTTTTGCTTACCAGCTTACTGGAAAAGCCAAGTACAGGCTTCGAACTTGCCCGACGTTTTGACCG
ATCAATGGGTTTCTTTTGGAATGCCAGTCATCAGCAAATTTATCGCGAACTCAACTCAATGTTAGGCAAAGGCTGGATTT
CCACAGTTCAAGGTGAAGAAGCACAGACACGAAAGAAAACTTATCAAGTTGAGCAGCCTGGTCATGTTGAACTGTCGAGC
TGGTTAATTCAACAAAGTGAACCTTCTCAGTTGCGTGATGATCTTATGGTGCGATTACGTGCTGAAGCGCAGTTAGGCAA
TAACCAGATTTTACCCGAGCTGGAACGTCATTTGATGCTTCATCAAGAAAAACTCAAACTTTATCAGACGATTTATGATA
AAGATTTTACACAAAACTTCCCTGAAAATCGGGTGTTGTTTATTCATAAAAAGATTTTACAATTAGGCATTACCACTGAA
AAAGAGTGGATAAAATGGCTGGATGAAGTCATTCCAGCATTAAAATCTTTTGAGACAGATTAG

Upstream 100 bases:

>100_bases
CTTGCTTAGTGCAACATGTTGCATTAATTTATAAACAAGATTTGATTTTTATGCAACTTATTGCATAATCTGGACAGTCA
CACTTTGTTTTAGGATTACT

Downstream 100 bases:

>100_bases
GAAAAGTTCATGCCATTTTATACCATGCCCGACCAAGAACAATTATTTGTCAGACGATTTGGATCTGGTAAACCAGTCGT
GGTTCTGTCTGGACTAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSLAHVLLTSLLEKPSTGFELARRFDRSMGFFWNASHQQIYRELNSMLGKGWISTVQGEEAQTRKKTYQVEQPGHVELSS
WLIQQSEPSQLRDDLMVRLRAEAQLGNNQILPELERHLMLHQEKLKLYQTIYDKDFTQNFPENRVLFIHKKILQLGITTE
KEWIKWLDEVIPALKSFETD

Sequences:

>Translated_180_residues
MSLAHVLLTSLLEKPSTGFELARRFDRSMGFFWNASHQQIYRELNSMLGKGWISTVQGEEAQTRKKTYQVEQPGHVELSS
WLIQQSEPSQLRDDLMVRLRAEAQLGNNQILPELERHLMLHQEKLKLYQTIYDKDFTQNFPENRVLFIHKKILQLGITTE
KEWIKWLDEVIPALKSFETD
>Mature_179_residues
SLAHVLLTSLLEKPSTGFELARRFDRSMGFFWNASHQQIYRELNSMLGKGWISTVQGEEAQTRKKTYQVEQPGHVELSSW
LIQQSEPSQLRDDLMVRLRAEAQLGNNQILPELERHLMLHQEKLKLYQTIYDKDFTQNFPENRVLFIHKKILQLGITTEK
EWIKWLDEVIPALKSFETD

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21213; Mature: 21081

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAHVLLTSLLEKPSTGFELARRFDRSMGFFWNASHQQIYRELNSMLGKGWISTVQGEE
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHCCCCH
AQTRKKTYQVEQPGHVELSSWLIQQSEPSQLRDDLMVRLRAEAQLGNNQILPELERHLML
HHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
HQEKLKLYQTIYDKDFTQNFPENRVLFIHKKILQLGITTEKEWIKWLDEVIPALKSFETD
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLAHVLLTSLLEKPSTGFELARRFDRSMGFFWNASHQQIYRELNSMLGKGWISTVQGEE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHHCCCCH
AQTRKKTYQVEQPGHVELSSWLIQQSEPSQLRDDLMVRLRAEAQLGNNQILPELERHLML
HHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
HQEKLKLYQTIYDKDFTQNFPENRVLFIHKKILQLGITTEKEWIKWLDEVIPALKSFETD
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]