Click here to switch to the map view.

The map label for this gene is qseC [H]

Identifier: 50084791

GI number: 50084791

Start: 1629827

End: 1631155

Strand: Direct

Name: qseC [H]

Synonym: ACIAD1633

Alternate gene names: 50084791

Gene position: 1629827-1631155 (Clockwise)

Preceding gene: 50084790

Following gene: 50084797

Centisome position: 45.29

GC content: 40.41

Gene sequence:

>1329_bases
ATGTTGAAACCCCACCGCAATGATTCTTCAGGCCACCGTGTAGCGGAAATCTTTAATCGTTACTATTGGCTGCAAATTGC
TTTAATTGCCTTATCGATTGTGGTGGGATTGGCGTGTAGTGCGTGGGTAATTAAGGGGTCTTTACTCAAGACAGCGCTTG
AGCAGGAAATGGAGCATTATTGGTTACGCATAGAGCGTAATCCAAAAGCAGATTTACCCGATACTAAAAATCTTTATGGC
TATCGATGGAATGGCGCGCAAACACCTTTACGGTTTCAAGATATGCATTTGAAAACAGGTGTTCATCGTATTTTTATTGA
TGGTAAAGAGCGCATGACCGTATATGGTGAAAAAAGTGGTCAACATGTGTTGCTCGTATTTGGCGAAAGTAATGTCAACA
AACTGGTGTGGTTATTTGGCCTTGCGCCGCTCATGTTTAGTTTATTTGTCTTGTATAGCTTTTTATGGTGGTCAAACCGT
CGTGCAAAACGCTATTTTTCACCGATCACCCGTTTGGCTAATACCTTAGAGCAAATTGACTGGACACATCAAGATAAACA
GGATTCTCTATTTTCTGATATCAGCACCAATGGCAATATGGAGGCTGAATACCTTAAAGCAGCACTGGAAAAATATCATC
AGGTACTTAGCCAGTTTATTCGCCGTGAACGCGAATTTACAGGAGATGTGAGTCATGAACTTAGAACGCCACTCACTATT
TTGAAAGGGAATGTACAGTTATGCCAGACACGTTATGGACATGATAAAGCTCTTACCCGAATTCATAATACCATTGAGGA
TATGCAGCTCTTAGTCGATACCTTACTGGCGATTGCTCGAAATACTGTGGAGAATCTGAATGCCGAGCAATATTTGCTAT
CAAAAATTATTCATGACCTGATAATAGATCTTGAGCCCATTAGTCAAGCTAAAGGAATTGATACCCAGATTCAGCATGAT
GTGGAAGAACAGCCTCGTTGGTTATATCCGTCCATGACTCAAATGGTGTTTGGTAATATTCTTCGAAATGCTCTCAATTA
CTCTCAAGGAAAGAGCATTGATATTGTTCTTCAAAAAAACAGTATTTTGATTGCCGACGATGGAATCGGTCTGAATTTAC
CAGAAGATGTTAAAGTGAAGGCATTGAATGAGTCTCAGCTTGATGTGAATGTAAAAGGTCATGGCATTGGACTACAGCTC
GTACAAAAGCTATGCAAACAACTCAATTGGCGGGTTGAGCTGTTTGATCGTGAATATTATTTATCTACGCATTCGGAATT
AAATCTTGCACATACCACAGGATTGATCGTGGTGGTCTATCTCTGCTAA

Upstream 100 bases:

>100_bases
AGGACAGGAATGGGTCATTGGTCACTTCTTGTTTAAAAAGAAAGTGATTATAAGTTAAATTAAAATTTAACTGAAACAGT
AAGGAAGTATTGATTACGAT

Downstream 100 bases:

>100_bases
ATATTGTATAAGCTCAAGAGTCCAACGCAATTTTTAAACCTACACCAGAGACCGTATGCAGCAATTTTTGTTGAAACGGT
TTATCGATCATTTTACGTAA

Product: two-component system sensor protein (ColS-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MLKPHRNDSSGHRVAEIFNRYYWLQIALIALSIVVGLACSAWVIKGSLLKTALEQEMEHYWLRIERNPKADLPDTKNLYG
YRWNGAQTPLRFQDMHLKTGVHRIFIDGKERMTVYGEKSGQHVLLVFGESNVNKLVWLFGLAPLMFSLFVLYSFLWWSNR
RAKRYFSPITRLANTLEQIDWTHQDKQDSLFSDISTNGNMEAEYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTI
LKGNVQLCQTRYGHDKALTRIHNTIEDMQLLVDTLLAIARNTVENLNAEQYLLSKIIHDLIIDLEPISQAKGIDTQIQHD
VEEQPRWLYPSMTQMVFGNILRNALNYSQGKSIDIVLQKNSILIADDGIGLNLPEDVKVKALNESQLDVNVKGHGIGLQL
VQKLCKQLNWRVELFDREYYLSTHSELNLAHTTGLIVVVYLC

Sequences:

>Translated_442_residues
MLKPHRNDSSGHRVAEIFNRYYWLQIALIALSIVVGLACSAWVIKGSLLKTALEQEMEHYWLRIERNPKADLPDTKNLYG
YRWNGAQTPLRFQDMHLKTGVHRIFIDGKERMTVYGEKSGQHVLLVFGESNVNKLVWLFGLAPLMFSLFVLYSFLWWSNR
RAKRYFSPITRLANTLEQIDWTHQDKQDSLFSDISTNGNMEAEYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTI
LKGNVQLCQTRYGHDKALTRIHNTIEDMQLLVDTLLAIARNTVENLNAEQYLLSKIIHDLIIDLEPISQAKGIDTQIQHD
VEEQPRWLYPSMTQMVFGNILRNALNYSQGKSIDIVLQKNSILIADDGIGLNLPEDVKVKALNESQLDVNVKGHGIGLQL
VQKLCKQLNWRVELFDREYYLSTHSELNLAHTTGLIVVVYLC
>Mature_442_residues
MLKPHRNDSSGHRVAEIFNRYYWLQIALIALSIVVGLACSAWVIKGSLLKTALEQEMEHYWLRIERNPKADLPDTKNLYG
YRWNGAQTPLRFQDMHLKTGVHRIFIDGKERMTVYGEKSGQHVLLVFGESNVNKLVWLFGLAPLMFSLFVLYSFLWWSNR
RAKRYFSPITRLANTLEQIDWTHQDKQDSLFSDISTNGNMEAEYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTI
LKGNVQLCQTRYGHDKALTRIHNTIEDMQLLVDTLLAIARNTVENLNAEQYLLSKIIHDLIIDLEPISQAKGIDTQIQHD
VEEQPRWLYPSMTQMVFGNILRNALNYSQGKSIDIVLQKNSILIADDGIGLNLPEDVKVKALNESQLDVNVKGHGIGLQL
VQKLCKQLNWRVELFDREYYLSTHSELNLAHTTGLIVVVYLC

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=344, Percent_Identity=25.2906976744186, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1790346, Length=210, Percent_Identity=27.1428571428571, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 51047; Mature: 51047

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPHRNDSSGHRVAEIFNRYYWLQIALIALSIVVGLACSAWVIKGSLLKTALEQEMEHY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLRIERNPKADLPDTKNLYGYRWNGAQTPLRFQDMHLKTGVHRIFIDGKERMTVYGEKSG
EEEEECCCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHCCCEEEEECCCCEEEEEECCCC
QHVLLVFGESNVNKLVWLFGLAPLMFSLFVLYSFLWWSNRRAKRYFSPITRLANTLEQID
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
WTHQDKQDSLFSDISTNGNMEAEYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTI
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHH
LKGNVQLCQTRYGHDKALTRIHNTIEDMQLLVDTLLAIARNTVENLNAEQYLLSKIIHDL
HCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IIDLEPISQAKGIDTQIQHDVEEQPRWLYPSMTQMVFGNILRNALNYSQGKSIDIVLQKN
HCCCCCHHHCCCCCHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
SILIADDGIGLNLPEDVKVKALNESQLDVNVKGHGIGLQLVQKLCKQLNWRVELFDREYY
EEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCEEE
LSTHSELNLAHTTGLIVVVYLC
ECCCCCCCEEECCCEEEEEEEC
>Mature Secondary Structure
MLKPHRNDSSGHRVAEIFNRYYWLQIALIALSIVVGLACSAWVIKGSLLKTALEQEMEHY
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLRIERNPKADLPDTKNLYGYRWNGAQTPLRFQDMHLKTGVHRIFIDGKERMTVYGEKSG
EEEEECCCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHCCCEEEEECCCCEEEEEECCCC
QHVLLVFGESNVNKLVWLFGLAPLMFSLFVLYSFLWWSNRRAKRYFSPITRLANTLEQID
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
WTHQDKQDSLFSDISTNGNMEAEYLKAALEKYHQVLSQFIRREREFTGDVSHELRTPLTI
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHH
LKGNVQLCQTRYGHDKALTRIHNTIEDMQLLVDTLLAIARNTVENLNAEQYLLSKIIHDL
HCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IIDLEPISQAKGIDTQIQHDVEEQPRWLYPSMTQMVFGNILRNALNYSQGKSIDIVLQKN
HCCCCCHHHCCCCCHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
SILIADDGIGLNLPEDVKVKALNESQLDVNVKGHGIGLQLVQKLCKQLNWRVELFDREYY
EEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCEEE
LSTHSELNLAHTTGLIVVVYLC
ECCCCCCCEEECCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]