Click here to switch to the map view.

The map label for this gene is 50084797

Identifier: 50084797

GI number: 50084797

Start: 1635004

End: 1637166

Strand: Direct

Name: 50084797

Synonym: ACIAD1639

Alternate gene names: NA

Gene position: 1635004-1637166 (Clockwise)

Preceding gene: 50084791

Following gene: 50084798

Centisome position: 45.43

GC content: 43.55

Gene sequence:

>2163_bases
CTGATTGTACGTATGAAAAAAATTGACACGACTTTTAAAAAAACCACTTTGGGGGTTTATATTTTAGCAGCTACGCTATC
TTCTGTAACTTTTGCGGATAACTTAGCTTTAGGAAACGGTGCAACAAATACTAAAGGTATAGATAATGCAGTCGCGATTG
GTGATTCTGCATTAGCGAGTCAAACTGGCGCAGTGGCATTGGGTGCAGGTAGTAACACTGCAACTAATGCTACAGCTGCT
AGTGATGTTACTATTAAAGATGGAAATGGTAACGATATTACAATTTCGGCAAGTCAGTTTGCAGGAAATAGCAATATTGA
TTCAGGTGATCAGGTTTCAGTGGGTAGTGTTGGAAATGAACGTCAGATCAAAAATGTCGCAGCAGGTGAAGTGAGTTCAA
CATCGACAGATGCTGTCAATGGTAGTCAGCTATATGCGGTTGCAGATACTTTAGCGAAAGAAATCAAAAATACTCAAACT
GAAGTAACCGAAGGCAAAAATGTTACAGTGACCTCAACGACAGGCGCCAATGGTCAAACCGTGTATAACGTTGCCACCAA
AGATGATGTTGACTTTGACAAGGTGACCGTCGGTAAGGTTGTTGTTGATAAAGATAATGGTATTGATGCAGGTGATACCA
AGATTACTGGTGTTGCAGCAGGTGACGTGAGTGCAACCTCGACAGATGCTGTCAATGGTAGCCAATTATATAGTGCGGCT
GCAAAAGCGACCACAGAAGTAACCGAAGGCAAAAATGTTACAGTGACCTCAACGACAGGTGCCAATGGTCAAACCGTGTA
TAACGTTGCCACCAAAGATGATGTTGACTTTGACAAGGTGACCGTCGGTAAGGTTGTCATTGACAAAGATAGCGGTATTG
ATGCAGGTGATACCAAGATTACTAGTGTTGCAGCAGGTGACGTGAGCGCAACCTCGACAGATGCTGTCAATGGTAGCCAA
TTATATAGTGCGGCTGCAAAAGCGACCACAGAAGTAACCGAAGGCAAAAATGTTACAGTGACCTCAACGACAGGCGCCAA
TGGTCAAACCGTGTATAACGTTGCCACCAAAGATGATGTTGACTTTGACAAGGTGACCGTCGGTAAGGTTGTCATTGACA
AAGATAGCGGTATTGATGCAGGTAATACCAAGATTACTGGTGTTGCAGCAGGTGACGTGAGCGCAACCTCGACAGATGCT
GTCAATGGTAGCCAATTATATAGTGCGGCTGCAAAAGCGACCACAGAAGTAACCGAAGGCAAAAATGTTACAGTGACCTC
AACGACAGGCGCCAATGGTCAAACCGTGTATAACGTTGCCACCAAAGATGATGTTGACTTTGACAAGGTGACAGTCGGTA
AGGTTGTCATTGACAAAGATAGCGGTATTGATGCAGGTAATACCAAGATTACGAATGTTGCAGCAGGTGATGTGAATGCA
ACCTCGACAGACGCTGTCAATGGTAGCCAGTTATATAGTGCGGCTGCAAAAGCGACCACAGAAGTAACAGAAGGCAAAAA
TATTACAGTAACTTCCACGACAGGTGCCAATGGTCAGGCAATCTATAATGTTGCTACAAGTGACGATGTTACGTTTAAGA
GTGTTACATCAGACCAGGTCACAGTTGGAAATGTTTCTATCAATCAATCTGGTATTAATGCAGGCAACACACAAATCACC
AATGTTGCAGCTGGTACCAAAACTACAGATGCGGTCAATCTTGGACAATTGCAAAGCACCGTATCTATTTTTGGGGGTGG
TTCTACGGTTAACTCGGATGGTTCGATCACCAATCCAACCTATAATGTAAATGGTGGAACCTACAACAATGTAGGTGATG
CATTAGGTGCATTAAATCAGGTAGATATTGATTTAGGTGATCGCATCACCAATCTTCAGCAGACTTTTAATAACCGTATC
AATGATGTCGAGGATAAGCTTAGTGCGGGGGTAGCATCTGCATTAGCACTTGAGTCAGCTCCGTATGTAGCGGGTAAATA
TACTTATGCTGCTGGAAGTGGATTTTATAATGGTCAATCTGCTATTGGGGTAAGTTTACGTAAAACGGCAGACAATGGCC
GTTGGTCATTAACTGGTGGTGTAGCAGCAGCAAGCCAAGGTGAAGCAAGTTTCCGCATCGGGATCAATGGGGTCATTGAT
TAA

Upstream 100 bases:

>100_bases
ACTTATAATAACGATAAAAAATAGAATTGTTTTTGGGGATGCATTGAGTGAATTTATAAATTTAAAACACTCTCTATTAC
TTTATTTTTAAAATTCAAGG

Downstream 100 bases:

>100_bases
TTTCATCAAAATTAACAACTTCATCTTTATAAAAATTTATACTTGAGAGTATTAGCATGAATTTATTAGAAAAAACATTG
ATTTTAGGTGTTCTAAGTGC

Product: surface protein (partial adhesin)

Products: NA

Alternate protein names: Autotransporter Adhesin; Surface Protein; YadA Domain-Containing Protein; Autotransporter; YadA Domain Protein; S-Layer-Like Domain Protein; Outer Membrane Protein; Peptide Transport System Permease SapB; Haemagglutinin/Invasin; Hemagglutinin Family Protein; Haemagluttinin Family Protein; Exported Adhesin; Hep_Hag Superfamily; YadA-Like Protein; Haemagglutinin Adhesin; Hemagglutinin-Related Protein; Haemagglutinin-Related Autotransporter Protein; Autotransporter/Adhesin; Extracellular Matrix Protein Adhesin A; Surface-Exposed Adhesin Protein; Inner Membrane Protein

Number of amino acids: Translated: 720; Mature: 720

Protein sequence:

>720_residues
MIVRMKKIDTTFKKTTLGVYILAATLSSVTFADNLALGNGATNTKGIDNAVAIGDSALASQTGAVALGAGSNTATNATAA
SDVTIKDGNGNDITISASQFAGNSNIDSGDQVSVGSVGNERQIKNVAAGEVSSTSTDAVNGSQLYAVADTLAKEIKNTQT
EVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVVDKDNGIDAGDTKITGVAAGDVSATSTDAVNGSQLYSAA
AKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGDTKITSVAAGDVSATSTDAVNGSQ
LYSAAAKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGNTKITGVAAGDVSATSTDA
VNGSQLYSAAAKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGNTKITNVAAGDVNA
TSTDAVNGSQLYSAAAKATTEVTEGKNITVTSTTGANGQAIYNVATSDDVTFKSVTSDQVTVGNVSINQSGINAGNTQIT
NVAAGTKTTDAVNLGQLQSTVSIFGGGSTVNSDGSITNPTYNVNGGTYNNVGDALGALNQVDIDLGDRITNLQQTFNNRI
NDVEDKLSAGVASALALESAPYVAGKYTYAAGSGFYNGQSAIGVSLRKTADNGRWSLTGGVAAASQGEASFRIGINGVID

Sequences:

>Translated_720_residues
MIVRMKKIDTTFKKTTLGVYILAATLSSVTFADNLALGNGATNTKGIDNAVAIGDSALASQTGAVALGAGSNTATNATAA
SDVTIKDGNGNDITISASQFAGNSNIDSGDQVSVGSVGNERQIKNVAAGEVSSTSTDAVNGSQLYAVADTLAKEIKNTQT
EVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVVDKDNGIDAGDTKITGVAAGDVSATSTDAVNGSQLYSAA
AKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGDTKITSVAAGDVSATSTDAVNGSQ
LYSAAAKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGNTKITGVAAGDVSATSTDA
VNGSQLYSAAAKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGNTKITNVAAGDVNA
TSTDAVNGSQLYSAAAKATTEVTEGKNITVTSTTGANGQAIYNVATSDDVTFKSVTSDQVTVGNVSINQSGINAGNTQIT
NVAAGTKTTDAVNLGQLQSTVSIFGGGSTVNSDGSITNPTYNVNGGTYNNVGDALGALNQVDIDLGDRITNLQQTFNNRI
NDVEDKLSAGVASALALESAPYVAGKYTYAAGSGFYNGQSAIGVSLRKTADNGRWSLTGGVAAASQGEASFRIGINGVID
>Mature_720_residues
MIVRMKKIDTTFKKTTLGVYILAATLSSVTFADNLALGNGATNTKGIDNAVAIGDSALASQTGAVALGAGSNTATNATAA
SDVTIKDGNGNDITISASQFAGNSNIDSGDQVSVGSVGNERQIKNVAAGEVSSTSTDAVNGSQLYAVADTLAKEIKNTQT
EVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVVDKDNGIDAGDTKITGVAAGDVSATSTDAVNGSQLYSAA
AKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGDTKITSVAAGDVSATSTDAVNGSQ
LYSAAAKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGNTKITGVAAGDVSATSTDA
VNGSQLYSAAAKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGNTKITNVAAGDVNA
TSTDAVNGSQLYSAAAKATTEVTEGKNITVTSTTGANGQAIYNVATSDDVTFKSVTSDQVTVGNVSINQSGINAGNTQIT
NVAAGTKTTDAVNLGQLQSTVSIFGGGSTVNSDGSITNPTYNVNGGTYNNVGDALGALNQVDIDLGDRITNLQQTFNNRI
NDVEDKLSAGVASALALESAPYVAGKYTYAAGSGFYNGQSAIGVSLRKTADNGRWSLTGGVAAASQGEASFRIGINGVID

Specific function: Unknown

COG id: COG5295

COG function: function code UW; Autotransporter adhesin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72365; Mature: 72365

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRMKKIDTTFKKTTLGVYILAATLSSVTFADNLALGNGATNTKGIDNAVAIGDSALAS
CEEEEECCCCHHHHHHHHEEEEEEHHHHHEEECCEEECCCCCCCCCCCCEEEECCHHHHC
QTGAVALGAGSNTATNATAASDVTIKDGNGNDITISASQFAGNSNIDSGDQVSVGSVGNE
CCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCCCCCCCCEEEECCCCCC
RQIKNVAAGEVSSTSTDAVNGSQLYAVADTLAKEIKNTQTEVTEGKNVTVTSTTGANGQT
HHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCCCE
VYNVATKDDVDFDKVTVGKVVVDKDNGIDAGDTKITGVAAGDVSATSTDAVNGSQLYSAA
EEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHH
AKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGDTKI
HHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEE
TSVAAGDVSATSTDAVNGSQLYSAAAKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDV
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCC
DFDKVTVGKVVIDKDSGIDAGNTKITGVAAGDVSATSTDAVNGSQLYSAAAKATTEVTEG
CCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
KNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGNTKITNVAAGDVNA
CEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCC
TSTDAVNGSQLYSAAAKATTEVTEGKNITVTSTTGANGQAIYNVATSDDVTFKSVTSDQV
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCE
TVGNVSINQSGINAGNTQITNVAAGTKTTDAVNLGQLQSTVSIFGGGSTVNSDGSITNPT
EEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEHHHHHEEEEEEECCCEECCCCCCCCCE
YNVNGGTYNNVGDALGALNQVDIDLGDRITNLQQTFNNRINDVEDKLSAGVASALALESA
EECCCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PYVAGKYTYAAGSGFYNGQSAIGVSLRKTADNGRWSLTGGVAAASQGEASFRIGINGVID
CCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEECCEEECCCCCCEEEEEECEECC
>Mature Secondary Structure
MIVRMKKIDTTFKKTTLGVYILAATLSSVTFADNLALGNGATNTKGIDNAVAIGDSALAS
CEEEEECCCCHHHHHHHHEEEEEEHHHHHEEECCEEECCCCCCCCCCCCEEEECCHHHHC
QTGAVALGAGSNTATNATAASDVTIKDGNGNDITISASQFAGNSNIDSGDQVSVGSVGNE
CCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCCCCCCCCEEEECCCCCC
RQIKNVAAGEVSSTSTDAVNGSQLYAVADTLAKEIKNTQTEVTEGKNVTVTSTTGANGQT
HHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCCCE
VYNVATKDDVDFDKVTVGKVVVDKDNGIDAGDTKITGVAAGDVSATSTDAVNGSQLYSAA
EEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHH
AKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGDTKI
HHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEE
TSVAAGDVSATSTDAVNGSQLYSAAAKATTEVTEGKNVTVTSTTGANGQTVYNVATKDDV
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCC
DFDKVTVGKVVIDKDSGIDAGNTKITGVAAGDVSATSTDAVNGSQLYSAAAKATTEVTEG
CCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
KNVTVTSTTGANGQTVYNVATKDDVDFDKVTVGKVVIDKDSGIDAGNTKITNVAAGDVNA
CEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCC
TSTDAVNGSQLYSAAAKATTEVTEGKNITVTSTTGANGQAIYNVATSDDVTFKSVTSDQV
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCE
TVGNVSINQSGINAGNTQITNVAAGTKTTDAVNLGQLQSTVSIFGGGSTVNSDGSITNPT
EEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEHHHHHEEEEEEECCCEECCCCCCCCCE
YNVNGGTYNNVGDALGALNQVDIDLGDRITNLQQTFNNRINDVEDKLSAGVASALALESA
EECCCCCCCCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PYVAGKYTYAAGSGFYNGQSAIGVSLRKTADNGRWSLTGGVAAASQGEASFRIGINGVID
CCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEECCEEECCCCCCEEEEEECEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA