Click here to switch to the map view.

The map label for this gene is bbsG [H]

Identifier: 50084728

GI number: 50084728

Start: 1557308

End: 1558501

Strand: Direct

Name: bbsG [H]

Synonym: ACIAD1566

Alternate gene names: 50084728

Gene position: 1557308-1558501 (Clockwise)

Preceding gene: 50084727

Following gene: 50084729

Centisome position: 43.28

GC content: 46.23

Gene sequence:

>1194_bases
ATGATCAATAATGATTTAAATCTGGCACATGACATCGCCATTAAGGTTGAAAAGTTTGTACGTGAGGTGGTAATTCCGTA
TGAGCGTGACCCACGGCGTGATCATCACAATTGCCCAACCGAAGAATTGGCTGTTGAACTGCGAGAGAAAGCGCGTGAGG
CGGGGGTTCTTGCACCACATATTTTGCCTGATGGTACACATTTAAGTCAGCGTGGAACAGCACAGGTTTTGATTAAAACG
GGTTTATCACCCTTAGGGCCGCTGGCTTGTCAAACTGCCGCGCCTGACGAAGGCAATATGTATTTGTTAGGTCAAGTGGG
CAGTGATTTTATCAAGCAAAAATTTCTAAAGCCTTTGGTCGAAGGAAATGCACGTTCTGCTTTTTTTATGACCGAACCTG
CGCAAGAAAATGGCGCAGGTTCTGATCCATCCATGATGCAAACGCGTTGTTGGAAAGAGGGCGATGAGTGGGTCATTCGT
GGTCGAAAAGCCTTTATTACTGGTGCAGATGGTGCACAGGTCGGCATTATTATGGCTAAGGCAGAACAAGGTGCTTGTAT
GTTTCTGGTCGAATTGCCGCATCCTGCGATTCAGATTGAGCAAGTACCACGTACCATTGACAGTTCAATGCCAGGTGGGC
ATGCAACATTATGGATGAATGACTTGCGAGTGCCAGCACAACAAATGCTAGGTGAACCGGGTGAAGGTTTTAAATATGCG
CAGGTTCGGCTTTCTCCAGCCCGTCTTTCGCATTGTATGCGCTGGTATGGTGCCTGTTTGCGTGCCAATGAAATTGCGAC
CGAATATGCCAATCAGCGTATGGCATTTGGACAGTTGCTGATTGATCATGAAGGATGCAGCTTTATGCTGGCCGAAAACC
TTATTGATCTAAAGCAGGTTGAACTCATGATTAATTGGTGTGCCTCGGTTTTAGATCAGGGTGAATTGGGTACATTTGAA
AGTTCGATGGCAAAAGTATCGGTGAGTGAAACCTTAATGCGAGTGGCTGATCGTTGTGTACAAGTGATGGGTGGCTCTGG
TTTGACCGAGCAAACAATTGTCGAGCAAGTATTCCGTGAGATTCGAGCCTTTCGTATTTATGACGGTCCGACCGAAGTAC
ATAAGTGGTCAATTGCAAAGAAAATTAAGCGAGATTGGCTGAAACGAAGCAAGCAACAGAAGCAAGGAGGCTGA

Upstream 100 bases:

>100_bases
AGCCTGATGAATTTGCCCAATTAGTCGAAAGTATCATCCTCAATCCAATGTTAAATGGCGAAGTGATCCGATTAGATGGT
GCAATACGGATGACAGCAAA

Downstream 100 bases:

>100_bases
GTGATGACGAGTTTAAATGCGCAAGCCAATACCGGGGTTGCTGCCGTAAGAGCAGGTATGGAACTGAATAAGCATGCTGT
AATTGAATGGATGCGAGCTC

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MINNDLNLAHDIAIKVEKFVREVVIPYERDPRRDHHNCPTEELAVELREKAREAGVLAPHILPDGTHLSQRGTAQVLIKT
GLSPLGPLACQTAAPDEGNMYLLGQVGSDFIKQKFLKPLVEGNARSAFFMTEPAQENGAGSDPSMMQTRCWKEGDEWVIR
GRKAFITGADGAQVGIIMAKAEQGACMFLVELPHPAIQIEQVPRTIDSSMPGGHATLWMNDLRVPAQQMLGEPGEGFKYA
QVRLSPARLSHCMRWYGACLRANEIATEYANQRMAFGQLLIDHEGCSFMLAENLIDLKQVELMINWCASVLDQGELGTFE
SSMAKVSVSETLMRVADRCVQVMGGSGLTEQTIVEQVFREIRAFRIYDGPTEVHKWSIAKKIKRDWLKRSKQQKQGG

Sequences:

>Translated_397_residues
MINNDLNLAHDIAIKVEKFVREVVIPYERDPRRDHHNCPTEELAVELREKAREAGVLAPHILPDGTHLSQRGTAQVLIKT
GLSPLGPLACQTAAPDEGNMYLLGQVGSDFIKQKFLKPLVEGNARSAFFMTEPAQENGAGSDPSMMQTRCWKEGDEWVIR
GRKAFITGADGAQVGIIMAKAEQGACMFLVELPHPAIQIEQVPRTIDSSMPGGHATLWMNDLRVPAQQMLGEPGEGFKYA
QVRLSPARLSHCMRWYGACLRANEIATEYANQRMAFGQLLIDHEGCSFMLAENLIDLKQVELMINWCASVLDQGELGTFE
SSMAKVSVSETLMRVADRCVQVMGGSGLTEQTIVEQVFREIRAFRIYDGPTEVHKWSIAKKIKRDWLKRSKQQKQGG
>Mature_397_residues
MINNDLNLAHDIAIKVEKFVREVVIPYERDPRRDHHNCPTEELAVELREKAREAGVLAPHILPDGTHLSQRGTAQVLIKT
GLSPLGPLACQTAAPDEGNMYLLGQVGSDFIKQKFLKPLVEGNARSAFFMTEPAQENGAGSDPSMMQTRCWKEGDEWVIR
GRKAFITGADGAQVGIIMAKAEQGACMFLVELPHPAIQIEQVPRTIDSSMPGGHATLWMNDLRVPAQQMLGEPGEGFKYA
QVRLSPARLSHCMRWYGACLRANEIATEYANQRMAFGQLLIDHEGCSFMLAENLIDLKQVELMINWCASVLDQGELGTFE
SSMAKVSVSETLMRVADRCVQVMGGSGLTEQTIVEQVFREIRAFRIYDGPTEVHKWSIAKKIKRDWLKRSKQQKQGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI38505218, Length=400, Percent_Identity=30.75, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI48976061, Length=390, Percent_Identity=31.7948717948718, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI211971008, Length=390, Percent_Identity=31.7948717948718, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI4557231, Length=377, Percent_Identity=29.7082228116711, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI187960098, Length=377, Percent_Identity=29.7082228116711, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI4557233, Length=296, Percent_Identity=30.7432432432432, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI4501859, Length=256, Percent_Identity=30.078125, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI4501857, Length=397, Percent_Identity=27.2040302267003, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI7656849, Length=353, Percent_Identity=24.6458923512748, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI76496475, Length=382, Percent_Identity=25.3926701570681, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4557235, Length=382, Percent_Identity=25.3926701570681, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI21361497, Length=394, Percent_Identity=25.1269035532995, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI226958412, Length=289, Percent_Identity=24.5674740484429, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI226958414, Length=289, Percent_Identity=24.5674740484429, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI4503943, Length=297, Percent_Identity=25.5892255892256, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87081958, Length=278, Percent_Identity=28.0575539568345, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1786223, Length=267, Percent_Identity=24.3445692883895, Blast_Score=85, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17570075, Length=288, Percent_Identity=30.5555555555556, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17562446, Length=354, Percent_Identity=31.3559322033898, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17569725, Length=282, Percent_Identity=28.3687943262411, Blast_Score=134, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI17534899, Length=394, Percent_Identity=26.3959390862944, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17508101, Length=294, Percent_Identity=27.2108843537415, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17551932, Length=292, Percent_Identity=28.0821917808219, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17505929, Length=293, Percent_Identity=27.3037542662116, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=385, Percent_Identity=24.9350649350649, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI71985184, Length=338, Percent_Identity=28.9940828402367, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=353, Percent_Identity=25.2124645892351, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=286, Percent_Identity=26.5734265734266, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI71990804, Length=237, Percent_Identity=26.1603375527426, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71982178, Length=280, Percent_Identity=26.4285714285714, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=272, Percent_Identity=26.4705882352941, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32563615, Length=178, Percent_Identity=28.0898876404494, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21356377, Length=301, Percent_Identity=29.5681063122924, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646207, Length=411, Percent_Identity=28.4671532846715, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24660351, Length=382, Percent_Identity=28.5340314136126, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24666513, Length=290, Percent_Identity=30.3448275862069, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI281363737, Length=281, Percent_Identity=27.4021352313167, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21355753, Length=284, Percent_Identity=25.3521126760563, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI19920834, Length=290, Percent_Identity=26.551724137931, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 44218; Mature: 44218

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNDLNLAHDIAIKVEKFVREVVIPYERDPRRDHHNCPTEELAVELREKAREAGVLAPH
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ILPDGTHLSQRGTAQVLIKTGLSPLGPLACQTAAPDEGNMYLLGQVGSDFIKQKFLKPLV
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
EGNARSAFFMTEPAQENGAGSDPSMMQTRCWKEGDEWVIRGRKAFITGADGAQVGIIMAK
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEECCEEEEECCCCCEEEEEEEE
AEQGACMFLVELPHPAIQIEQVPRTIDSSMPGGHATLWMNDLRVPAQQMLGEPGEGFKYA
CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCCCCEEE
QVRLSPARLSHCMRWYGACLRANEIATEYANQRMAFGQLLIDHEGCSFMLAENLIDLKQV
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
ELMINWCASVLDQGELGTFESSMAKVSVSETLMRVADRCVQVMGGSGLTEQTIVEQVFRE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IRAFRIYDGPTEVHKWSIAKKIKRDWLKRSKQQKQGG
HHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MINNDLNLAHDIAIKVEKFVREVVIPYERDPRRDHHNCPTEELAVELREKAREAGVLAPH
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
ILPDGTHLSQRGTAQVLIKTGLSPLGPLACQTAAPDEGNMYLLGQVGSDFIKQKFLKPLV
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
EGNARSAFFMTEPAQENGAGSDPSMMQTRCWKEGDEWVIRGRKAFITGADGAQVGIIMAK
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEECCEEEEECCCCCEEEEEEEE
AEQGACMFLVELPHPAIQIEQVPRTIDSSMPGGHATLWMNDLRVPAQQMLGEPGEGFKYA
CCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCCCCCCEEE
QVRLSPARLSHCMRWYGACLRANEIATEYANQRMAFGQLLIDHEGCSFMLAENLIDLKQV
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHH
ELMINWCASVLDQGELGTFESSMAKVSVSETLMRVADRCVQVMGGSGLTEQTIVEQVFRE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IRAFRIYDGPTEVHKWSIAKKIKRDWLKRSKQQKQGG
HHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]