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The map label for this gene is ytfH [C]

Identifier: 50084709

GI number: 50084709

Start: 1545290

End: 1545745

Strand: Reverse

Name: ytfH [C]

Synonym: ACIAD1545

Alternate gene names: 50084709

Gene position: 1545745-1545290 (Counterclockwise)

Preceding gene: 50084721

Following gene: 50084708

Centisome position: 42.95

GC content: 42.11

Gene sequence:

>456_bases
ATGAAATGGCATGAACTCGGTGAAATGAATTGTCCTATTGCACGGACTTTGTCAATTTTTGGCGACCGCTGGACCTTGCT
GATTATTCGTAATGCTTTTATGAAAACCCGACGTTTTGATGATTTTCAAAAGCAGTTAGGCATCACCCGTCATTTGCTGA
CCGAGCGTATTAACCGTTTGGTGGAACAAAAGATTTTTGAGAAAGTGCTGTATCATGAAGCACCAAAACGTTATGAATAT
AAGCTGACTGAAAAAGGCTTAGCCCTGTACCCTATTATTGTCACGATGAGTACATGGGGCAATATTTGGCAGAATGAAAA
TAAGCAATTTCCTGAGTTACGTTATCTGCATAAAAACTGTGGGCAACTGACCAGTCCAAGTCTGACCTGTGACTGCTGCA
AACAGCCAATTGATGCGAGACAGATGTCGCCAGTTTATGTGTCGGGTGAGGAGTAA

Upstream 100 bases:

>100_bases
AGGTGCCTTGATAAGTTGTCAATAAAGCGGATATCTTAATCCTTCAAGTTGTCCTAAAATGACAGCCCGCTTCCTGTAAA
GACATATAGATGGTATTGCG

Downstream 100 bases:

>100_bases
ACTGATGCCAAACTAATTTTCTTTGAGCATCCTATAAATATATCCAAAATATTATGAATGTATTGCACAGCTAAAATATA
TTCATAATAGCTCTATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKWHELGEMNCPIARTLSIFGDRWTLLIIRNAFMKTRRFDDFQKQLGITRHLLTERINRLVEQKIFEKVLYHEAPKRYEY
KLTEKGLALYPIIVTMSTWGNIWQNENKQFPELRYLHKNCGQLTSPSLTCDCCKQPIDARQMSPVYVSGEE

Sequences:

>Translated_151_residues
MKWHELGEMNCPIARTLSIFGDRWTLLIIRNAFMKTRRFDDFQKQLGITRHLLTERINRLVEQKIFEKVLYHEAPKRYEY
KLTEKGLALYPIIVTMSTWGNIWQNENKQFPELRYLHKNCGQLTSPSLTCDCCKQPIDARQMSPVYVSGEE
>Mature_151_residues
MKWHELGEMNCPIARTLSIFGDRWTLLIIRNAFMKTRRFDDFQKQLGITRHLLTERINRLVEQKIFEKVLYHEAPKRYEY
KLTEKGLALYPIIVTMSTWGNIWQNENKQFPELRYLHKNCGQLTSPSLTCDCCKQPIDARQMSPVYVSGEE

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 17941; Mature: 17941

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWHELGEMNCPIARTLSIFGDRWTLLIIRNAFMKTRRFDDFQKQLGITRHLLTERINRL
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEQKIFEKVLYHEAPKRYEYKLTEKGLALYPIIVTMSTWGNIWQNENKQFPELRYLHKNC
HHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
GQLTSPSLTCDCCKQPIDARQMSPVYVSGEE
CCCCCCCCCHHHHCCCCCCHHCCCEEECCCC
>Mature Secondary Structure
MKWHELGEMNCPIARTLSIFGDRWTLLIIRNAFMKTRRFDDFQKQLGITRHLLTERINRL
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEQKIFEKVLYHEAPKRYEYKLTEKGLALYPIIVTMSTWGNIWQNENKQFPELRYLHKNC
HHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
GQLTSPSLTCDCCKQPIDARQMSPVYVSGEE
CCCCCCCCCHHHHCCCCCCHHCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]