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The map label for this gene is arcD [H]

Identifier: 50084594

GI number: 50084594

Start: 1411352

End: 1412692

Strand: Reverse

Name: arcD [H]

Synonym: ACIAD1417

Alternate gene names: 50084594

Gene position: 1412692-1411352 (Counterclockwise)

Preceding gene: 50084595

Following gene: 50084592

Centisome position: 39.26

GC content: 40.64

Gene sequence:

>1341_bases
ATGTCAACTTCTAAAATTGGCTTGCTATCCTTAACCGCACTCGTGTTTAGCTCGATGGTCGGTTCTGGTGTGTTTAGTTT
GCCACAAAATATGGCTGCTGTAGCCAACGGGTCAGCCTTGCTTTTTGCATGGCTGATTACAGGCATTGGTATTATTTTTC
TGGCCTTATCCCTGCTTTATTTAACACGACAGCGACCAGATCTTGACGGTGGAATTTATAACTACGCCCGTGAAGGATTT
GGTGATCTGATTGGTTTTTGTTCCGCCTGGGGTTACTGGTTATGTACCACAATCGGTATTGTCGGCTATGTGGTCATCGC
ATTTTCAGCCGTAGGTATGTTTACAGATACACCTGAACACATCTACTTTGGCGAAGGCAATACACTTTACGCTCTAATTG
GGTCATCTATATTTGTCTGGCTGATACACTGGCTGGTCAGTCGAGGTATCAAAGAAGCTGCACTGGTCAATCTTATGGCA
ACCATTGCCAAGATTGTTCCATTGGTCGTTTTTATTGTTTTTTCATTTGTCGCATTCAAACTCGAATTATTCAAACTGAA
TTTCCTGGATACTTCCCTTCAAATGCCCGTATGGCAACAAGTACGTGATGTCATGCTGATTACACTCTGGGTATTTACAG
GAATTGAAGGTGCGGTTGTACTTTCCTCTCGTGCTAAAAAGCGAAATGACATTGGAAAAGCAACGCTGCTTGGCGTATTA
CTGGCACTGGCTTTTTATGTAATGGTGACAGTACTGGCTTATGGTATCAATACTCGTAGTGAAATCGCAGGTATGCATAA
TCCGTCAATGGCAACTATTTTAGGGCAACTGATTGGTATTCCTGGCACTATTGTGATTACACTGGGTTTGATTATTTCGG
TTTCATCGTCATATTTAAGCTGGACGCTCTTTGCCACAGAGATTCCTTATCTGGCTGCAAAAAATGGGGCTTTTCCTAAA
ATTTTTCTGAAAACCAACCAGAATAATGTGCCAATTTCATCGCTATGGCTGACTTCTATCGTGGTGCAGATTTCACTCAT
TGCGGTATGTTTTTTCAATAAAAACTATACTCAGTTATTGTTAATCTCTTCAGTTATGATTTTATTGCCATATTTTCTGG
TGTCTGCATTTTACTTAAAAGAGTCTACTCGCCATAAACGTACAAAACATATCGTGATCGCAAGTATTGCAACTGTATAT
GCAATCTGGTTACTGTACGCCGCAGGACTTTCATTACTTCTGCTATCTGGTATTTTTTATGCTTTAGGATTATTGATTTT
TTTCTACAGCCGCTTCTCGGTGAGAGGTTCAGGATTAAACAAAGAAAATTCTGCTTCCTGA

Upstream 100 bases:

>100_bases
AACAGTGGCAACACGCTGGTGCATCCATGATTGGTGGCTGCTGTGGCATAGGTCCTGAGCACATTCAGAAACTTTCTCAG
TTTTTTCAAGAATAATTTTT

Downstream 100 bases:

>100_bases
TAGATTTATGAGCATTATCACAAGATACAAGTCATTTATTTAAGCAGCGACCAACAGTAAATGACTTGTTGATGTGATGT
AAAAAATTACCATCCCATAT

Product: arginine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MSTSKIGLLSLTALVFSSMVGSGVFSLPQNMAAVANGSALLFAWLITGIGIIFLALSLLYLTRQRPDLDGGIYNYAREGF
GDLIGFCSAWGYWLCTTIGIVGYVVIAFSAVGMFTDTPEHIYFGEGNTLYALIGSSIFVWLIHWLVSRGIKEAALVNLMA
TIAKIVPLVVFIVFSFVAFKLELFKLNFLDTSLQMPVWQQVRDVMLITLWVFTGIEGAVVLSSRAKKRNDIGKATLLGVL
LALAFYVMVTVLAYGINTRSEIAGMHNPSMATILGQLIGIPGTIVITLGLIISVSSSYLSWTLFATEIPYLAAKNGAFPK
IFLKTNQNNVPISSLWLTSIVVQISLIAVCFFNKNYTQLLLISSVMILLPYFLVSAFYLKESTRHKRTKHIVIASIATVY
AIWLLYAAGLSLLLLSGIFYALGLLIFFYSRFSVRGSGLNKENSAS

Sequences:

>Translated_446_residues
MSTSKIGLLSLTALVFSSMVGSGVFSLPQNMAAVANGSALLFAWLITGIGIIFLALSLLYLTRQRPDLDGGIYNYAREGF
GDLIGFCSAWGYWLCTTIGIVGYVVIAFSAVGMFTDTPEHIYFGEGNTLYALIGSSIFVWLIHWLVSRGIKEAALVNLMA
TIAKIVPLVVFIVFSFVAFKLELFKLNFLDTSLQMPVWQQVRDVMLITLWVFTGIEGAVVLSSRAKKRNDIGKATLLGVL
LALAFYVMVTVLAYGINTRSEIAGMHNPSMATILGQLIGIPGTIVITLGLIISVSSSYLSWTLFATEIPYLAAKNGAFPK
IFLKTNQNNVPISSLWLTSIVVQISLIAVCFFNKNYTQLLLISSVMILLPYFLVSAFYLKESTRHKRTKHIVIASIATVY
AIWLLYAAGLSLLLLSGIFYALGLLIFFYSRFSVRGSGLNKENSAS
>Mature_445_residues
STSKIGLLSLTALVFSSMVGSGVFSLPQNMAAVANGSALLFAWLITGIGIIFLALSLLYLTRQRPDLDGGIYNYAREGFG
DLIGFCSAWGYWLCTTIGIVGYVVIAFSAVGMFTDTPEHIYFGEGNTLYALIGSSIFVWLIHWLVSRGIKEAALVNLMAT
IAKIVPLVVFIVFSFVAFKLELFKLNFLDTSLQMPVWQQVRDVMLITLWVFTGIEGAVVLSSRAKKRNDIGKATLLGVLL
ALAFYVMVTVLAYGINTRSEIAGMHNPSMATILGQLIGIPGTIVITLGLIISVSSSYLSWTLFATEIPYLAAKNGAFPKI
FLKTNQNNVPISSLWLTSIVVQISLIAVCFFNKNYTQLLLISSVMILLPYFLVSAFYLKESTRHKRTKHIVIASIATVYA
IWLLYAAGLSLLLLSGIFYALGLLIFFYSRFSVRGSGLNKENSAS

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=441, Percent_Identity=53.968253968254, Blast_Score=478, Evalue=1e-136,
Organism=Escherichia coli, GI2367353, Length=415, Percent_Identity=27.9518072289157, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1786908, Length=453, Percent_Identity=23.6203090507726, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1790575, Length=444, Percent_Identity=23.8738738738739, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004754 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48821; Mature: 48689

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
STSKIGLLSLTALVFSSMVGSGVFSLPQNMAAVANGSALLFAWLITGIGIIFLALSLLY
CCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LTRQRPDLDGGIYNYAREGFGDLIGFCSAWGYWLCTTIGIVGYVVIAFSAVGMFTDTPEH
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
IYFGEGNTLYALIGSSIFVWLIHWLVSRGIKEAALVNLMATIAKIVPLVVFIVFSFVAFK
EEECCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LELFKLNFLDTSLQMPVWQQVRDVMLITLWVFTGIEGAVVLSSRAKKRNDIGKATLLGVL
HHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH
LALAFYVMVTVLAYGINTRSEIAGMHNPSMATILGQLIGIPGTIVITLGLIISVSSSYLS
HHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHE
WTLFATEIPYLAAKNGAFPKIFLKTNQNNVPISSLWLTSIVVQISLIAVCFFNKNYTQLL
EEHHHHHCCHHEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LISSVMILLPYFLVSAFYLKESTRHKRTKHIVIASIATVYAIWLLYAAGLSLLLLSGIFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGLLIFFYSRFSVRGSGLNKENSAS
HHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]