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The map label for this gene is yrdA [H]

Identifier: 50084412

GI number: 50084412

Start: 1226364

End: 1226903

Strand: Reverse

Name: yrdA [H]

Synonym: ACIAD1224

Alternate gene names: 50084412

Gene position: 1226903-1226364 (Counterclockwise)

Preceding gene: 50084413

Following gene: 50084411

Centisome position: 34.09

GC content: 42.78

Gene sequence:

>540_bases
ATGAAAAAAAATATACGCCCTTATCTCGAACATCAACCTAAAATTGACTCGACCTGTTACATCGATGACATGTCGGTTGT
AATTGGCGATGTTCAACTGGCCGAACATGCATCGGTCTGGCCATTTGCGGTCATTCGTGGTGATGTGAATCAGATTCGTA
TTGGACGCAATAGCAATGTGCAAGATCACTGCATGCTACATGTCAGTCATAAAAATGATGCAAAACCTGACGGCTCACCA
CTCACGATTGGTGAAGATGTCACTATCGGTCATCATGTGACCTTACATGGCTGCACCATCGGAAATCGTGTTTTGGTCGG
CATCAATACCGTGATTTTAGATGATGCTATCATTGAAGATGATGTCATGATTGGTGCGGGAAGCTTGGTTCCACCACGTA
AACGACTTGAAAGCGGTTATTTGTATGTGGGCAGCCCAGTCCAGCAAGTTCGAGCTCTTACTGAAAAAGAAATGTCATTT
TTACCATATTCGGCACGCCATTATGTCAAAGTAAAAAATCATTATTTGGCCGAAAAATGA

Upstream 100 bases:

>100_bases
CTGTTCTAATTGATCGCTATAAAAATGAAGGCATTCCTGTTTCAAACATGAATGCCTTTTTTCTTTTATACTGCATAAAA
CTCAACGACATTGATAGCTC

Downstream 100 bases:

>100_bases
TAGCTCTTTCAATATTATGAGTGAGGATTTAACGATAAATATGAGTGAATGTTACTCAATATAAATAATGATTTTTAAAA
ATTTATATATTTAAATTTAA

Product: transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKKNIRPYLEHQPKIDSTCYIDDMSVVIGDVQLAEHASVWPFAVIRGDVNQIRIGRNSNVQDHCMLHVSHKNDAKPDGSP
LTIGEDVTIGHHVTLHGCTIGNRVLVGINTVILDDAIIEDDVMIGAGSLVPPRKRLESGYLYVGSPVQQVRALTEKEMSF
LPYSARHYVKVKNHYLAEK

Sequences:

>Translated_179_residues
MKKNIRPYLEHQPKIDSTCYIDDMSVVIGDVQLAEHASVWPFAVIRGDVNQIRIGRNSNVQDHCMLHVSHKNDAKPDGSP
LTIGEDVTIGHHVTLHGCTIGNRVLVGINTVILDDAIIEDDVMIGAGSLVPPRKRLESGYLYVGSPVQQVRALTEKEMSF
LPYSARHYVKVKNHYLAEK
>Mature_179_residues
MKKNIRPYLEHQPKIDSTCYIDDMSVVIGDVQLAEHASVWPFAVIRGDVNQIRIGRNSNVQDHCMLHVSHKNDAKPDGSP
LTIGEDVTIGHHVTLHGCTIGNRVLVGINTVILDDAIIEDDVMIGAGSLVPPRKRLESGYLYVGSPVQQVRALTEKEMSF
LPYSARHYVKVKNHYLAEK

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=178, Percent_Identity=61.2359550561798, Blast_Score=229, Evalue=8e-62,
Organism=Escherichia coli, GI1787667, Length=156, Percent_Identity=33.974358974359, Blast_Score=107, Evalue=4e-25,
Organism=Escherichia coli, GI87081681, Length=156, Percent_Identity=32.0512820512821, Blast_Score=94, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19948; Mature: 19948

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNIRPYLEHQPKIDSTCYIDDMSVVIGDVQLAEHASVWPFAVIRGDVNQIRIGRNSNV
CCCCCCCHHCCCCCCCCEEEEECCEEEEECEEECCCCCCCEEEEEECCCEEEEECCCCCC
QDHCMLHVSHKNDAKPDGSPLTIGEDVTIGHHVTLHGCTIGNRVLVGINTVILDDAIIED
CCEEEEEEECCCCCCCCCCCEEECCCEEECEEEEEEEEECCCEEEEEEEEEEECCEEECC
DVMIGAGSLVPPRKRLESGYLYVGSPVQQVRALTEKEMSFLPYSARHYVKVKNHYLAEK
CEEEECCCCCCCHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECEECCCC
>Mature Secondary Structure
MKKNIRPYLEHQPKIDSTCYIDDMSVVIGDVQLAEHASVWPFAVIRGDVNQIRIGRNSNV
CCCCCCCHHCCCCCCCCEEEEECCEEEEECEEECCCCCCCEEEEEECCCEEEEECCCCCC
QDHCMLHVSHKNDAKPDGSPLTIGEDVTIGHHVTLHGCTIGNRVLVGINTVILDDAIIED
CCEEEEEEECCCCCCCCCCCEEECCCEEECEEEEEEEEECCCEEEEEEEEEEECCEEECC
DVMIGAGSLVPPRKRLESGYLYVGSPVQQVRALTEKEMSFLPYSARHYVKVKNHYLAEK
CEEEECCCCCCCHHHHCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEECEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]