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The map label for this gene is yoaV [H]

Identifier: 50084345

GI number: 50084345

Start: 1144735

End: 1145586

Strand: Direct

Name: yoaV [H]

Synonym: ACIAD1154

Alternate gene names: 50084345

Gene position: 1144735-1145586 (Clockwise)

Preceding gene: 50084337

Following gene: 50084346

Centisome position: 31.81

GC content: 39.67

Gene sequence:

>852_bases
TTGGTCAAGCATAGTCTGCAAGTTTTCCCGCCGTTTTTATTCATTTCTACACGACTCATTCTAGCCGCGCTCACGTTGAT
GTTGGTTCAGCGCGTGATGAAAAAATCGGTGATGCCACAACGGCATGAATGGCCGCGTTTGATGATATTGAGTGCTATGG
TCTGTTTAGGCTTTTATACAACTCAGACTTTTGCCATGCAATTTGTTGACTCAGGTCTTTCTGCGGTATTGGTCTTTACT
ATGCCGATTTTCATTGGAGTATTGGCACATTACTTCTTGAATGAATATCTTACTCGACAAAAAATATTCGGTTTGATTCT
AGGTACATTAGGGTTGATTGCGATTTTGTGGCCACAACTTCATCATTTGGGTTTGAATTTGTCTCTTGTGGGTCAGATCA
TGTTGATTGGTTCAGGATTATTTTGGGCAATGTCTACGGTATATATCAAAAAATACTTTGCCACTTACGACAAAATTAAA
TTGACCATTTGGCAGCTCTTGCTGGGTGGGGTTGTTGTGTTTATAGGTGCTTTAAGCTTTGAGCCAGTAGATGCGAAGGT
GTGGTTAAATCCTTTAAATGAATCTTTGCTGATTTATATTGCAATTATAGGAACAGGTTTTGCTTTTGCACTGTGGAACT
GGATTGTGAGTCAGGTCGATACCTTCGTCGCATCTATTTCAATCATGTGTATTCCTATCTTAAGCCTGTTGTTTGGTGCA
TTGATATGGCATGAAGCTTTAACGCTGAATATCGTGATTGGTGCAGCTTTTATCTGTATGGGAATTGTGATGAGTGCATT
AACCTTAACTCATCAAAAAACATCAATGCAATATAGCCGCTGCCCTAAATGA

Upstream 100 bases:

>100_bases
TACAATCAGTTTAATCTTTATGCGTTGAGTAAAATACGTGAATATTCGGGTCATCAGTGCCATTATCCTGTTATGTCTGG
TATGGGGATCTTTATGGGGC

Downstream 100 bases:

>100_bases
TTTAAGCAAGCTAAAAAATGATTCATGCCCATATGGACTTACACAGAAATTAAAATATATACCTACAATTGGTCAGTCAT
ATTGTGAAATATGGCTGATC

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MVKHSLQVFPPFLFISTRLILAALTLMLVQRVMKKSVMPQRHEWPRLMILSAMVCLGFYTTQTFAMQFVDSGLSAVLVFT
MPIFIGVLAHYFLNEYLTRQKIFGLILGTLGLIAILWPQLHHLGLNLSLVGQIMLIGSGLFWAMSTVYIKKYFATYDKIK
LTIWQLLLGGVVVFIGALSFEPVDAKVWLNPLNESLLIYIAIIGTGFAFALWNWIVSQVDTFVASISIMCIPILSLLFGA
LIWHEALTLNIVIGAAFICMGIVMSALTLTHQKTSMQYSRCPK

Sequences:

>Translated_283_residues
MVKHSLQVFPPFLFISTRLILAALTLMLVQRVMKKSVMPQRHEWPRLMILSAMVCLGFYTTQTFAMQFVDSGLSAVLVFT
MPIFIGVLAHYFLNEYLTRQKIFGLILGTLGLIAILWPQLHHLGLNLSLVGQIMLIGSGLFWAMSTVYIKKYFATYDKIK
LTIWQLLLGGVVVFIGALSFEPVDAKVWLNPLNESLLIYIAIIGTGFAFALWNWIVSQVDTFVASISIMCIPILSLLFGA
LIWHEALTLNIVIGAAFICMGIVMSALTLTHQKTSMQYSRCPK
>Mature_283_residues
MVKHSLQVFPPFLFISTRLILAALTLMLVQRVMKKSVMPQRHEWPRLMILSAMVCLGFYTTQTFAMQFVDSGLSAVLVFT
MPIFIGVLAHYFLNEYLTRQKIFGLILGTLGLIAILWPQLHHLGLNLSLVGQIMLIGSGLFWAMSTVYIKKYFATYDKIK
LTIWQLLLGGVVVFIGALSFEPVDAKVWLNPLNESLLIYIAIIGTGFAFALWNWIVSQVDTFVASISIMCIPILSLLFGA
LIWHEALTLNIVIGAAFICMGIVMSALTLTHQKTSMQYSRCPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI87082351, Length=231, Percent_Identity=29.004329004329, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31755; Mature: 31755

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MVKHSLQVFPPFLFISTRLILAALTLMLVQRVMKKSVMPQRHEWPRLMILSAMVCLGFYT
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
TQTFAMQFVDSGLSAVLVFTMPIFIGVLAHYFLNEYLTRQKIFGLILGTLGLIAILWPQL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHLGLNLSLVGQIMLIGSGLFWAMSTVYIKKYFATYDKIKLTIWQLLLGGVVVFIGALSF
HHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPVDAKVWLNPLNESLLIYIAIIGTGFAFALWNWIVSQVDTFVASISIMCIPILSLLFGA
CCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIWHEALTLNIVIGAAFICMGIVMSALTLTHQKTSMQYSRCPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]