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The map label for this gene is yggA [C]

Identifier: 50084171

GI number: 50084171

Start: 953779

End: 954441

Strand: Reverse

Name: yggA [C]

Synonym: ACIAD0966

Alternate gene names: 50084171

Gene position: 954441-953779 (Counterclockwise)

Preceding gene: 50084174

Following gene: 50084169

Centisome position: 26.52

GC content: 38.91

Gene sequence:

>663_bases
TTGATATTGCCCTCTACGCTCATCTTGATCCATGCGCATATCTCCTCAGCCATATATGGACACTTTAATATGACTGCTTT
TCTCTATGGATTAGGCATTGGATTTTCTTTAATTCTGGCAATTGGTGCCCAAAATGCATTTGTATTAAAACAAGGGCTAA
AACGCCAACATGTATTTTGGGTGTGTCTGGTTTGTGCATTGTCCGATTCTGTATTGATTTATTTAGGAGTAATAGGTTTC
TCTCAAATCATTGTCAGTTTTCCTATGATTGTGATCTTAGCAAAATATTTTGGTGCACTATTTTTGTTGCTTTATGGCGC
CAAACATTTTTATGCAGCGTTACAGTCATCGGCATTGTATCCGAGCGAACTGGAAAACGACTCTCTTTATACAATTATTG
GGCTATGTCTGGCATTTACATGGCTTAATCCACATGTCTATCTTGATACGGTCATTCTAGTCGGTTCACTGTCTGTTCAA
TTTTCACAACAACGCGATCTATTTGCAGCGGGATGTATGCTGGCTTCATGGTTATTCTTTTTTGCACTGGGTTACGGCGC
GCGCATGTTGCTACCTATTTTTAAAAGCACACGTTCATGGAAAATACTCGATATGATTATCGGCTTGATGATGTGGACAA
TTGCACTCACATTGATCATTTAA

Upstream 100 bases:

>100_bases
TTACTGATTTCAATAATGAAAAGTAGATAATCATTGTGATTGATTTGAACTCATTTAAAGCCCCTTATGCAGCTTATTTT
TTTCGTTATTAGAACTTATT

Downstream 100 bases:

>100_bases
GATTTATAAATTGGTCTGTTTATTTAGCAGACCAATTTATAAGTTAAACAAGCTATTTTAAAAATTCATTGTGTGACCAA
ATAAGCCAATCCATCATGAC

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MILPSTLILIHAHISSAIYGHFNMTAFLYGLGIGFSLILAIGAQNAFVLKQGLKRQHVFWVCLVCALSDSVLIYLGVIGF
SQIIVSFPMIVILAKYFGALFLLLYGAKHFYAALQSSALYPSELENDSLYTIIGLCLAFTWLNPHVYLDTVILVGSLSVQ
FSQQRDLFAAGCMLASWLFFFALGYGARMLLPIFKSTRSWKILDMIIGLMMWTIALTLII

Sequences:

>Translated_220_residues
MILPSTLILIHAHISSAIYGHFNMTAFLYGLGIGFSLILAIGAQNAFVLKQGLKRQHVFWVCLVCALSDSVLIYLGVIGF
SQIIVSFPMIVILAKYFGALFLLLYGAKHFYAALQSSALYPSELENDSLYTIIGLCLAFTWLNPHVYLDTVILVGSLSVQ
FSQQRDLFAAGCMLASWLFFFALGYGARMLLPIFKSTRSWKILDMIIGLMMWTIALTLII
>Mature_220_residues
MILPSTLILIHAHISSAIYGHFNMTAFLYGLGIGFSLILAIGAQNAFVLKQGLKRQHVFWVCLVCALSDSVLIYLGVIGF
SQIIVSFPMIVILAKYFGALFLLLYGAKHFYAALQSSALYPSELENDSLYTIIGLCLAFTWLNPHVYLDTVILVGSLSVQ
FSQQRDLFAAGCMLASWLFFFALGYGARMLLPIFKSTRSWKILDMIIGLMMWTIALTLII

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=194, Percent_Identity=40.2061855670103, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 24479; Mature: 24479

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPSTLILIHAHISSAIYGHFNMTAFLYGLGIGFSLILAIGAQNAFVLKQGLKRQHVFW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHH
VCLVCALSDSVLIYLGVIGFSQIIVSFPMIVILAKYFGALFLLLYGAKHFYAALQSSALY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PSELENDSLYTIIGLCLAFTWLNPHVYLDTVILVGSLSVQFSQQRDLFAAGCMLASWLFF
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALGYGARMLLPIFKSTRSWKILDMIIGLMMWTIALTLII
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILPSTLILIHAHISSAIYGHFNMTAFLYGLGIGFSLILAIGAQNAFVLKQGLKRQHVFW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHH
VCLVCALSDSVLIYLGVIGFSQIIVSFPMIVILAKYFGALFLLLYGAKHFYAALQSSALY
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PSELENDSLYTIIGLCLAFTWLNPHVYLDTVILVGSLSVQFSQQRDLFAAGCMLASWLFF
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALGYGARMLLPIFKSTRSWKILDMIIGLMMWTIALTLII
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]