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The map label for this gene is rimP

Identifier: 50083627

GI number: 50083627

Start: 358821

End: 359345

Strand: Direct

Name: rimP

Synonym: ACIAD0367

Alternate gene names: 50083627

Gene position: 358821-359345 (Clockwise)

Preceding gene: 50083626

Following gene: 50083628

Centisome position: 9.97

GC content: 43.24

Gene sequence:

>525_bases
ATGAAGTTATCAAACAAAACCCAAGCACTCCATGATCTAATCGCTCCTGCAGTGCAAGCCTGTGACGTGAATCTTTGGGG
AATTGAATTTATTCCACAAGGCAAGCGCTCATTATTGCGTATTTTTATTGACAAGCCCGTAGATGAGACTGCTGAACCTG
TTTTAAATGAAGACGGGGAAACTGAGCTCGGACGTGGTATTGGCGTTCAGGACTGTGTTCGTGTCACCCAGCAAGTGGGT
GCCATCTTGGACGTTCATGATCCGATTTCAGGTGAGTATGCACTTGAAGTTTCATCGCCAGGTTGGGATCGACCATTTTT
CCAGCTTGAACAAATGTCTGCATATATCGGACAACAAGTCGCTCTGAGATTAATTAGCGCTGTCGAAAATCGTCGTAAGT
TCCAAGCAAAACTGTTGCTCGTAGATCTTGAAAATGAAATGATTCAAGTAGAAGTGGACGGTAAGCATGTGCTTGAGATT
GATAGTCATAATATCGACAAAGCAAACTTGATCTATCAGGACTAA

Upstream 100 bases:

>100_bases
CGTGTAGTGTCGACATCAATTGGTCAAATAGTCATGCTTCACTATAGTAAGTCTGAATCGGTCTAAAGACCGATTGAATC
GCACAAAATGACGAGAGTAA

Downstream 100 bases:

>100_bases
ATTCATTTAAATTAATAAGAATCTGTAGGTGACTTATGAGCCGTGAAATTCTTACCGTTGTAGAAACGGTTAGTAATGAA
AAAGGTGTTAGTCGTGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKLSNKTQALHDLIAPAVQACDVNLWGIEFIPQGKRSLLRIFIDKPVDETAEPVLNEDGETELGRGIGVQDCVRVTQQVG
AILDVHDPISGEYALEVSSPGWDRPFFQLEQMSAYIGQQVALRLISAVENRRKFQAKLLLVDLENEMIQVEVDGKHVLEI
DSHNIDKANLIYQD

Sequences:

>Translated_174_residues
MKLSNKTQALHDLIAPAVQACDVNLWGIEFIPQGKRSLLRIFIDKPVDETAEPVLNEDGETELGRGIGVQDCVRVTQQVG
AILDVHDPISGEYALEVSSPGWDRPFFQLEQMSAYIGQQVALRLISAVENRRKFQAKLLLVDLENEMIQVEVDGKHVLEI
DSHNIDKANLIYQD
>Mature_174_residues
MKLSNKTQALHDLIAPAVQACDVNLWGIEFIPQGKRSLLRIFIDKPVDETAEPVLNEDGETELGRGIGVQDCVRVTQQVG
AILDVHDPISGEYALEVSSPGWDRPFFQLEQMSAYIGQQVALRLISAVENRRKFQAKLLLVDLENEMIQVEVDGKHVLEI
DSHNIDKANLIYQD

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=170, Percent_Identity=44.7058823529412, Blast_Score=118, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_ACIAD (Q6FF42)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_045137.1
- ProteinModelPortal:   Q6FF42
- SMR:   Q6FF42
- STRING:   Q6FF42
- GeneID:   2879500
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD0367
- NMPDR:   fig|62977.3.peg.881
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   TIENCAA
- PhylomeDB:   Q6FF42
- ProtClustDB:   PRK14631
- BioCyc:   ASP62977:ACIAD0367-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 19504; Mature: 19504

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSNKTQALHDLIAPAVQACDVNLWGIEFIPQGKRSLLRIFIDKPVDETAEPVLNEDGE
CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHCCCCC
TELGRGIGVQDCVRVTQQVGAILDVHDPISGEYALEVSSPGWDRPFFQLEQMSAYIGQQV
CHHCCCCCHHHHHHHHHHHCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
ALRLISAVENRRKFQAKLLLVDLENEMIQVEVDGKHVLEIDSHNIDKANLIYQD
HHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCEEECC
>Mature Secondary Structure
MKLSNKTQALHDLIAPAVQACDVNLWGIEFIPQGKRSLLRIFIDKPVDETAEPVLNEDGE
CCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHCCCCC
TELGRGIGVQDCVRVTQQVGAILDVHDPISGEYALEVSSPGWDRPFFQLEQMSAYIGQQV
CHHCCCCCHHHHHHHHHHHCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
ALRLISAVENRRKFQAKLLLVDLENEMIQVEVDGKHVLEIDSHNIDKANLIYQD
HHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA