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The map label for this gene is desA3 [H]

Identifier: 50083343

GI number: 50083343

Start: 52789

End: 53940

Strand: Direct

Name: desA3 [H]

Synonym: ACIAD0049

Alternate gene names: 50083343

Gene position: 52789-53940 (Clockwise)

Preceding gene: 50083342

Following gene: 50083344

Centisome position: 1.47

GC content: 42.19

Gene sequence:

>1152_bases
ATGAATATGTCTGTCAAATTCCCTGAAAATAGTAAGTCACAATATCTCAACCCAGAGCAGGTTGAAGCATTTGGTCGTCG
CGTTGAAGAGATTCGCCGTGAAGTGATGGAAAATCTAGGCGAAGCCGATGCTAAATATATCTATAAAATTCGTAATTTTG
TCCGTTATAGTGAAATTGCATCACGCGGCATGTTGATGTTTGGTGGCTGGATTCCACCCGTCTGGTTAGCTGGAACAGGT
TTACTTGGACTATCCAAAATTGTAGAAAACATGGAGCTTGGGCATAACGTCATGCATGGTCAGTTTGACTGGCTCAATGA
CCCAAGCCTCAATGGTGCCAATTATGACTGGGACACCATTGCAACGGGTGATGACTGGAAACATACCCACAACTATGTGC
ATCACACGTATACCAATATTGTAGGCAAGGATCATGATGTAGGATATGGCTTACTGCGCGTGAGCGAACAGCAAAAATGG
GAGCCTCGTTTCTTATTTAATATTCCTTTGGGAATACAGTTGATGGTGTTATTTGAATGGTATGTTGGGGTACAGAATCT
GCACCTTGAAGATGCTCTGGTTTATAAAACTAAAACCTGGAAACAAGTATGGTCGGATTCGACTAAATTCCGTAAAAAAT
TAGTGCGTCAGGTGGGTAAAGACTATGTGTTCTTTCCGCTCATTGCAGGGCCTAATGCTGTTCCTGTATTTTTAGGTAAC
GCTGTTGCAAATGTAATTCGCAGTTTGTGGGCTTCTGCCGTGATTTTTAATGGTCATTTTACCGAAGATGCGGAAACTTT
TGAGGAAGACAATACGGCCACCGAAACACGTGCACAGTGGTACCTACGTCAGATTCGTGGCTCAAGTAATTTCAGTGGCA
CGGAATGGCTGCATATTTTAAGTGGTAACTTAAGCCATCAAATCGAGCATCATTTATTTCCAGATATGCCAGCCAACCGT
TATGCCGAAGTTGCACCTAAAATCAAGGCACTCTGTGAGGAGTATGGGGTGAATTATAACGAAGCCAATTTCGTTAAACA
GTTCTGGAGTGTCTGGGTTCGTTTGGCAAAATGCTCGTTGCCAAATGGATATACAGATCAGGTTTCAAGTAAGATTCAAA
AAATGAAAACGATCTTCAGCTTGAGCAAATAA

Upstream 100 bases:

>100_bases
GGCAATAATACCCAAATCAAACTTTGTGTAAGTCAGGCCATTAGTCCTGTCGTGATCAACCTTTAAGACCGTAAGAATCC
ATCAGATTCGGAGAAAAATA

Downstream 100 bases:

>100_bases
GGCTTTTGTAAAAAGCACAGAATTGGGCCGAATTCGGCCCAATTTTATTGGAGTCATTTGTTATACTATGCTGCAATCTT
ATTTAGCGGCAATGAAAGGA

Product: linoleoyl-CoA desaturase

Products: NA

Alternate protein names: Delta(9)-desaturase; Stearoyl-CoA desaturase [H]

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MNMSVKFPENSKSQYLNPEQVEAFGRRVEEIRREVMENLGEADAKYIYKIRNFVRYSEIASRGMLMFGGWIPPVWLAGTG
LLGLSKIVENMELGHNVMHGQFDWLNDPSLNGANYDWDTIATGDDWKHTHNYVHHTYTNIVGKDHDVGYGLLRVSEQQKW
EPRFLFNIPLGIQLMVLFEWYVGVQNLHLEDALVYKTKTWKQVWSDSTKFRKKLVRQVGKDYVFFPLIAGPNAVPVFLGN
AVANVIRSLWASAVIFNGHFTEDAETFEEDNTATETRAQWYLRQIRGSSNFSGTEWLHILSGNLSHQIEHHLFPDMPANR
YAEVAPKIKALCEEYGVNYNEANFVKQFWSVWVRLAKCSLPNGYTDQVSSKIQKMKTIFSLSK

Sequences:

>Translated_383_residues
MNMSVKFPENSKSQYLNPEQVEAFGRRVEEIRREVMENLGEADAKYIYKIRNFVRYSEIASRGMLMFGGWIPPVWLAGTG
LLGLSKIVENMELGHNVMHGQFDWLNDPSLNGANYDWDTIATGDDWKHTHNYVHHTYTNIVGKDHDVGYGLLRVSEQQKW
EPRFLFNIPLGIQLMVLFEWYVGVQNLHLEDALVYKTKTWKQVWSDSTKFRKKLVRQVGKDYVFFPLIAGPNAVPVFLGN
AVANVIRSLWASAVIFNGHFTEDAETFEEDNTATETRAQWYLRQIRGSSNFSGTEWLHILSGNLSHQIEHHLFPDMPANR
YAEVAPKIKALCEEYGVNYNEANFVKQFWSVWVRLAKCSLPNGYTDQVSSKIQKMKTIFSLSK
>Mature_383_residues
MNMSVKFPENSKSQYLNPEQVEAFGRRVEEIRREVMENLGEADAKYIYKIRNFVRYSEIASRGMLMFGGWIPPVWLAGTG
LLGLSKIVENMELGHNVMHGQFDWLNDPSLNGANYDWDTIATGDDWKHTHNYVHHTYTNIVGKDHDVGYGLLRVSEQQKW
EPRFLFNIPLGIQLMVLFEWYVGVQNLHLEDALVYKTKTWKQVWSDSTKFRKKLVRQVGKDYVFFPLIAGPNAVPVFLGN
AVANVIRSLWASAVIFNGHFTEDAETFEEDNTATETRAQWYLRQIRGSSNFSGTEWLHILSGNLSHQIEHHLFPDMPANR
YAEVAPKIKALCEEYGVNYNEANFVKQFWSVWVRLAKCSLPNGYTDQVSSKIQKMKTIFSLSK

Specific function: Desaturates stearoyl-CoA to form oleoyl-CoA [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable). Note=Has been shown to be membrane-associated but no reliable trans-membrane regions are predicted by bioinformatics tools [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 44215; Mature: 44215

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMSVKFPENSKSQYLNPEQVEAFGRRVEEIRREVMENLGEADAKYIYKIRNFVRYSEIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SRGMLMFGGWIPPVWLAGTGLLGLSKIVENMELGHNVMHGQFDWLNDPSLNGANYDWDTI
HCCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
ATGDDWKHTHNYVHHTYTNIVGKDHDVGYGLLRVSEQQKWEPRFLFNIPLGIQLMVLFEW
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCEEEEECCCHHHHHHHHHH
YVGVQNLHLEDALVYKTKTWKQVWSDSTKFRKKLVRQVGKDYVFFPLIAGPNAVPVFLGN
HHHHCCCCCCHHHEEHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
AVANVIRSLWASAVIFNGHFTEDAETFEEDNTATETRAQWYLRQIRGSSNFSGTEWLHIL
HHHHHHHHHHHHHEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
SGNLSHQIEHHLFPDMPANRYAEVAPKIKALCEEYGVNYNEANFVKQFWSVWVRLAKCSL
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PNGYTDQVSSKIQKMKTIFSLSK
CCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNMSVKFPENSKSQYLNPEQVEAFGRRVEEIRREVMENLGEADAKYIYKIRNFVRYSEIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SRGMLMFGGWIPPVWLAGTGLLGLSKIVENMELGHNVMHGQFDWLNDPSLNGANYDWDTI
HCCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
ATGDDWKHTHNYVHHTYTNIVGKDHDVGYGLLRVSEQQKWEPRFLFNIPLGIQLMVLFEW
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCCCEEEEECCCHHHHHHHHHH
YVGVQNLHLEDALVYKTKTWKQVWSDSTKFRKKLVRQVGKDYVFFPLIAGPNAVPVFLGN
HHHHCCCCCCHHHEEHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
AVANVIRSLWASAVIFNGHFTEDAETFEEDNTATETRAQWYLRQIRGSSNFSGTEWLHIL
HHHHHHHHHHHHHEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
SGNLSHQIEHHLFPDMPANRYAEVAPKIKALCEEYGVNYNEANFVKQFWSVWVRLAKCSL
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PNGYTDQVSSKIQKMKTIFSLSK
CCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]