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The map label for this gene is 49480805

Identifier: 49480805

GI number: 49480805

Start: 5106904

End: 5107218

Strand: Reverse

Name: 49480805

Synonym: BT9727_5043

Alternate gene names: NA

Gene position: 5107218-5106904 (Counterclockwise)

Preceding gene: 49480428

Following gene: 49481721

Centisome position: 97.51

GC content: 31.43

Gene sequence:

>315_bases
ATGAAGGAAGATAAATTTGAACAGAAGATAAAGAGTAGCTTAGCAGAAGAGATAATTCCAAGCGAAGAGCTAATAAATAA
TACGAAGCAAGGCGTACGAAAGGCTCAGAAACTAGAGAAGAGGTGGATGATTTGTATTCACGCCATTTGGATTGTTTTAT
TAACAGTTGTTATAGAACAATTTGTTACTCATTTAGATAACAAAATTCCAATTATTATAGCAGTTGTTATTATGATGCAC
GTATACATTCCGATATATGTTGTAATACAGTCATTTTTAAAGAAGGAGTATAAATTACATGAAAGAGTTCGCTAA

Upstream 100 bases:

>100_bases
AAAGAAATGAGTGAAATATTAAATATACCAATTGGTACGGTGAAATACCGTCTTAATTATGCCAAGAAGCAAATGCGAGA
ATATTTGGAGGGGTTCGTTC

Downstream 100 bases:

>100_bases
TCCGTTTGTAATATTTGAAGTAGCTGGGGTGACAATGTTTTTAGCTTTTATAGCACTTTTAATATGTGTTGCATCATGGG
TATATACAGATGCTAAAGCA

Product: ECF-type sigma factor negative effector

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKEDKFEQKIKSSLAEEIIPSEELINNTKQGVRKAQKLEKRWMICIHAIWIVLLTVVIEQFVTHLDNKIPIIIAVVIMMH
VYIPIYVVIQSFLKKEYKLHERVR

Sequences:

>Translated_104_residues
MKEDKFEQKIKSSLAEEIIPSEELINNTKQGVRKAQKLEKRWMICIHAIWIVLLTVVIEQFVTHLDNKIPIIIAVVIMMH
VYIPIYVVIQSFLKKEYKLHERVR
>Mature_104_residues
MKEDKFEQKIKSSLAEEIIPSEELINNTKQGVRKAQKLEKRWMICIHAIWIVLLTVVIEQFVTHLDNKIPIIIAVVIMMH
VYIPIYVVIQSFLKKEYKLHERVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12369; Mature: 12369

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEDKFEQKIKSSLAEEIIPSEELINNTKQGVRKAQKLEKRWMICIHAIWIVLLTVVIEQ
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVTHLDNKIPIIIAVVIMMHVYIPIYVVIQSFLKKEYKLHERVR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEDKFEQKIKSSLAEEIIPSEELINNTKQGVRKAQKLEKRWMICIHAIWIVLLTVVIEQ
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVTHLDNKIPIIIAVVIMMHVYIPIYVVIQSFLKKEYKLHERVR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA