| Definition | Bacillus thuringiensis serovar konkukian str. 97-27 chromosome, complete genome. |
|---|---|
| Accession | NC_005957 |
| Length | 5,237,682 |
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The map label for this gene is ymfM [H]
Identifier: 49479420
GI number: 49479420
Start: 3615341
End: 3616252
Strand: Reverse
Name: ymfM [H]
Synonym: BT9727_3524
Alternate gene names: 49479420
Gene position: 3616252-3615341 (Counterclockwise)
Preceding gene: 49481623
Following gene: 49478371
Centisome position: 69.04
GC content: 38.71
Gene sequence:
>912_bases GTGACAGAATTAGGACAAAAGCTGAAAGAAGCAAGAGGAACGAAAGGCTTGTCTATTGATCAGCTGCATGAGATTACAAA AATTCAAAAACGCCATTTAGTAGCAATTGAGGAAGGCAATTATGATGTATTGCCAGGAGCTTTTTATGCGCGTGCATTCA TTAAACAATACGCAGATGCGGTTGGATTAAATGGAGAGGAACTGCTTGTAGAATATCAGAGTACGATACCACAATCTGAA AAACGCGACGTTCCACAAGTGTCAACCGGACAAAAAACACAAGAAACAATGCAGAAATCTTCATCATGGCCAATTGCAGA TCATATGCCAAAAATCTTAGTTGCGCTGTTAGTAATCGCAGTTGGAGTGGTAATTTGGTTTATTTTCCAAGCGTTAACTG GAAAAGGTGATGAGAAGGTTCCGAATGCTCAAAGTGAGAAAATTGAAGTTAAAAAAGCGGAAAACTCTCCGTTAGACACG AAGAAAGATGAAGTAAAAGCGGAAGAGCCGAAAAAAGAAGAACCAAAGAAAGAAGAACCGAAGAAAGAGGAACAACCAGC ACAGCCAACGGGACAACAAGAAGTGAAAGTAGTTGGGACAACTGGTAAAGTATCTACTTTGGAAATTCATAATAATAAAA CATTAGAACTGGAAATATCGGGTAAGGGTGCGAGTTATGTAGATGTTAAAGATGATGCGGGTAACGAAATTTTAAACACT ACAGTACAAGATGGTCAAACAGAAAAACGAGATTTATCAACAGCAAAAGAAGTGCGACTTAATATTGGAAATGCAACGAA TGTTGAAGTTAAACTGAATGGCCAAGTAGTCGCTTACCCATTGGATCCAGAAAAAGAACTTCACCAAAGATTGGTGATAA AAAACCAAGGGGTAGAGCAACCTGCACAATAA
Upstream 100 bases:
>100_bases TGATGAAGAAATTCAATATAATTTAGTAGATGAAATTGAGCAAGGTACGCAAAATAATTTCTCTATGTTTGACTTTTAAA GAAATATTGAGGTGTTAGTA
Downstream 100 bases:
>100_bases CAGTCATCGCTTCGATGACTTTTTTCAATGAACAAATGTTTTTGATATGATGGAGGAATAGCTGTGAATTTACCAAATAA AATTACGATATCTAGAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTELGQKLKEARGTKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQYADAVGLNGEELLVEYQSTIPQSE KRDVPQVSTGQKTQETMQKSSSWPIADHMPKILVALLVIAVGVVIWFIFQALTGKGDEKVPNAQSEKIEVKKAENSPLDT KKDEVKAEEPKKEEPKKEEPKKEEQPAQPTGQQEVKVVGTTGKVSTLEIHNNKTLELEISGKGASYVDVKDDAGNEILNT TVQDGQTEKRDLSTAKEVRLNIGNATNVEVKLNGQVVAYPLDPEKELHQRLVIKNQGVEQPAQ
Sequences:
>Translated_303_residues MTELGQKLKEARGTKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQYADAVGLNGEELLVEYQSTIPQSE KRDVPQVSTGQKTQETMQKSSSWPIADHMPKILVALLVIAVGVVIWFIFQALTGKGDEKVPNAQSEKIEVKKAENSPLDT KKDEVKAEEPKKEEPKKEEPKKEEQPAQPTGQQEVKVVGTTGKVSTLEIHNNKTLELEISGKGASYVDVKDDAGNEILNT TVQDGQTEKRDLSTAKEVRLNIGNATNVEVKLNGQVVAYPLDPEKELHQRLVIKNQGVEQPAQ >Mature_302_residues TELGQKLKEARGTKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQYADAVGLNGEELLVEYQSTIPQSEK RDVPQVSTGQKTQETMQKSSSWPIADHMPKILVALLVIAVGVVIWFIFQALTGKGDEKVPNAQSEKIEVKKAENSPLDTK KDEVKAEEPKKEEPKKEEPKKEEQPAQPTGQQEVKVVGTTGKVSTLEIHNNKTLELEISGKGASYVDVKDDAGNEILNTT VQDGQTEKRDLSTAKEVRLNIGNATNVEVKLNGQVVAYPLDPEKELHQRLVIKNQGVEQPAQ
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33536; Mature: 33405
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELGQKLKEARGTKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQYADA CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHH VGLNGEELLVEYQSTIPQSEKRDVPQVSTGQKTQETMQKSSSWPIADHMPKILVALLVIA HCCCHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VGVVIWFIFQALTGKGDEKVPNAQSEKIEVKKAENSPLDTKKDEVKAEEPKKEEPKKEEP HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCC KKEEQPAQPTGQQEVKVVGTTGKVSTLEIHNNKTLELEISGKGASYVDVKDDAGNEILNT CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEECCCCCEEEEECCCCCCHHHHH TVQDGQTEKRDLSTAKEVRLNIGNATNVEVKLNGQVVAYPLDPEKELHQRLVIKNQGVEQ HHCCCCCHHHHHHHHHHHEEECCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHCCCCCC PAQ CCC >Mature Secondary Structure TELGQKLKEARGTKGLSIDQLHEITKIQKRHLVAIEEGNYDVLPGAFYARAFIKQYADA CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHH VGLNGEELLVEYQSTIPQSEKRDVPQVSTGQKTQETMQKSSSWPIADHMPKILVALLVIA HCCCHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VGVVIWFIFQALTGKGDEKVPNAQSEKIEVKKAENSPLDTKKDEVKAEEPKKEEPKKEEP HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCC KKEEQPAQPTGQQEVKVVGTTGKVSTLEIHNNKTLELEISGKGASYVDVKDDAGNEILNT CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEECCCCCEEEEECCCCCCHHHHH TVQDGQTEKRDLSTAKEVRLNIGNATNVEVKLNGQVVAYPLDPEKELHQRLVIKNQGVEQ HHCCCCCHHHHHHHHHHHEEECCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHCCCCCC PAQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]