Click here to switch to the map view.

The map label for this gene is ybcF [H]

Identifier: 49479082

GI number: 49479082

Start: 3011972

End: 3012484

Strand: Reverse

Name: ybcF [H]

Synonym: BT9727_2936

Alternate gene names: 49479082

Gene position: 3012484-3011972 (Counterclockwise)

Preceding gene: 49479522

Following gene: 49478047

Centisome position: 57.52

GC content: 32.16

Gene sequence:

>513_bases
ATGAATGCAAAGAAGAAAAAGGTTTTATTGTTAACAGACATGGAACACGGAATAGAGCCTATCATACAACAAGTAACTAA
CATTCAACGAGAAAATATGTTGACTATACACAGCTGCGATTCTGTAATTGTACATCCTTTTGGAGATATAATGAGGTCTA
TTATTATCGCTATTTATCAAGAAAATGTGGAAGAAATTTTTGTTGTCGGAATAGAGGATAAAGAAACTAATGTAGTTAAT
CTACAAATTCAACGTGATTCCATAAAAAATAACAAGGAACTAGACTATCTCTTTGAAAATTGTATGCCTGAATTTTCAAG
TGGTAGCCTTGAGGAATGGCTAAGTGGAAAAGAAAATGTTAGTGAAAATATTGAGAAGAGTATAGATATGATTCGTCATC
ATCCATTAGTACCTTCTGATGTTAAAGTTCATGGCTTCATGATTGATAAAACAGGTGGAAAAGAAACGGTGGTTAAAGTT
TCTGCTAATAAAGTAGCTGAATGCATGAATTAA

Upstream 100 bases:

>100_bases
GGACGTTGGAAAAATTGGTAACAATTATGTAATGAATACTCAACAATTGTTACTAGTTTAAAAGTTCTATAAATACAATC
ATGAAGAAGGAGTGCTATAT

Downstream 100 bases:

>100_bases
TTTATTAAGGACAAATAAATTTTTATGTATGAATTGCTGTTGTATAATAAAATTTACCCCGCATTACCCCCACCTCAAAA
ATCAACGGAAGCAAAGAAGT

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNAKKKKVLLLTDMEHGIEPIIQQVTNIQRENMLTIHSCDSVIVHPFGDIMRSIIIAIYQENVEEIFVVGIEDKETNVVN
LQIQRDSIKNNKELDYLFENCMPEFSSGSLEEWLSGKENVSENIEKSIDMIRHHPLVPSDVKVHGFMIDKTGGKETVVKV
SANKVAECMN

Sequences:

>Translated_170_residues
MNAKKKKVLLLTDMEHGIEPIIQQVTNIQRENMLTIHSCDSVIVHPFGDIMRSIIIAIYQENVEEIFVVGIEDKETNVVN
LQIQRDSIKNNKELDYLFENCMPEFSSGSLEEWLSGKENVSENIEKSIDMIRHHPLVPSDVKVHGFMIDKTGGKETVVKV
SANKVAECMN
>Mature_170_residues
MNAKKKKVLLLTDMEHGIEPIIQQVTNIQRENMLTIHSCDSVIVHPFGDIMRSIIIAIYQENVEEIFVVGIEDKETNVVN
LQIQRDSIKNNKELDYLFENCMPEFSSGSLEEWLSGKENVSENIEKSIDMIRHHPLVPSDVKVHGFMIDKTGGKETVVKV
SANKVAECMN

Specific function: Unknown

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: NA

Molecular weight: Translated: 19325; Mature: 19325

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKKKKVLLLTDMEHGIEPIIQQVTNIQRENMLTIHSCDSVIVHPFGDIMRSIIIAIYQ
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCEEECCHHHHHHHHHHHHHH
ENVEEIFVVGIEDKETNVVNLQIQRDSIKNNKELDYLFENCMPEFSSGSLEEWLSGKENV
CCCCEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHH
SENIEKSIDMIRHHPLVPSDVKVHGFMIDKTGGKETVVKVSANKVAECMN
HHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHCC
>Mature Secondary Structure
MNAKKKKVLLLTDMEHGIEPIIQQVTNIQRENMLTIHSCDSVIVHPFGDIMRSIIIAIYQ
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCEEEEECCCCEEECCHHHHHHHHHHHHHH
ENVEEIFVVGIEDKETNVVNLQIQRDSIKNNKELDYLFENCMPEFSSGSLEEWLSGKENV
CCCCEEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHH
SENIEKSIDMIRHHPLVPSDVKVHGFMIDKTGGKETVVKVSANKVAECMN
HHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]